From 6893d1c2d51fe5704e67e1dd61600c9fc23df867 Mon Sep 17 00:00:00 2001 From: sft-managed Date: Tue, 12 Apr 2022 17:16:15 +0000 Subject: [PATCH] Adding q05 to be reviewed --- gpu_bdb/bdb_tools/q05_utils.py | 40 +++++++++++++++++++++++++--------- 1 file changed, 30 insertions(+), 10 deletions(-) diff --git a/gpu_bdb/bdb_tools/q05_utils.py b/gpu_bdb/bdb_tools/q05_utils.py index 6ee48cbd..7e41f4d2 100644 --- a/gpu_bdb/bdb_tools/q05_utils.py +++ b/gpu_bdb/bdb_tools/q05_utils.py @@ -15,15 +15,22 @@ # import cupy as cp +import numpy as np import cuml -from cuml.metrics import confusion_matrix +import sklearn + +from cuml.metrics import confusion_matrix as cuml_confusion_matrix from bdb_tools.cupy_metrics import cupy_precision_score from bdb_tools.readers import build_reader -from sklearn.metrics import roc_auc_score +from sklearn.metrics import ( + roc_auc_score, + precision_score, + confusion_matrix +) # Logistic Regression params # solver = "LBFGS" Used by passing `penalty=None` or "l2" @@ -43,6 +50,7 @@ def read_tables(config, c=None): data_format=config["file_format"], basepath=config["data_dir"], split_row_groups=config["split_row_groups"], + backend=config["backend"], ) item_ddf = table_reader.read("item", relevant_cols=items_columns, index=False) @@ -69,7 +77,8 @@ def build_and_predict_model(ml_input_df): Create a standardized feature matrix X and target array y. Returns the model and accuracy statistics """ - + import cudf + feature_names = ["college_education", "male"] + [ "clicks_in_%d" % i for i in range(1, 8) ] @@ -77,15 +86,20 @@ def build_and_predict_model(ml_input_df): # Standardize input matrix X = (X - X.mean()) / X.std() y = ml_input_df["clicks_in_category"] + + if isinstance(ml_input_df, cudf.DataFrame): + model_backend = cuml.LogisticRegression + else: + model_backend = sklearn.linear_model.LogisticRegression - model = cuml.LogisticRegression( + model = model_backend( tol=convergence_tol, penalty="none", - solver="qn", fit_intercept=True, max_iter=iterations, C=C, ) + model.fit(X, y) # # Predict and evaluate accuracy @@ -94,11 +108,17 @@ def build_and_predict_model(ml_input_df): results_dict = {} y_pred = model.predict(X) - results_dict["auc"] = roc_auc_score(y.values_host, y_pred.values_host) - results_dict["precision"] = cupy_precision_score(cp.asarray(y), cp.asarray(y_pred)) - results_dict["confusion_matrix"] = confusion_matrix( - cp.asarray(y, dtype="int32"), cp.asarray(y_pred, dtype="int32") - ) + if isinstance(ml_input_df, cudf.DataFrame): + results_dict["auc"] = roc_auc_score(y.values_host, y_pred.values_host) + results_dict["precision"] = cupy_precision_score(cp.asarray(y), cp.asarray(y_pred)) + results_dict["confusion_matrix"] = cuml_confusion_matrix( + cp.asarray(y, dtype="int32"), cp.asarray(y_pred, dtype="int32") + ) + else: + results_dict["auc"] = roc_auc_score(y.to_numpy(), y_pred) + results_dict["precision"] = precision_score(y.to_numpy(), y_pred) + results_dict["confusion_matrix"] = confusion_matrix(y.to_numpy(dtype="int32"), y_pred) + results_dict["output_type"] = "supervised" return results_dict