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possible to merge results of multiple input parameters or error out? #98

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antgonza opened this issue Jan 25, 2021 · 1 comment
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enhancement New feature or request

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@antgonza
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For example, if I pass 3 folders:

$ woltka classify \
  --input raw_data/105218/ \
  --input raw_data/105030/ \
  --input raw_data/105053/ \
  ... \
  --output combined/

the command runs fine to completion but only keeps the results of the last input folder. Note that all the folders contain individual xz files from overlapping samples (like raw_data/105218/sample1.xz, raw_data/105030/sample2.xz, raw_data/105030/sample1.xz, etc) and it would be nice if the resulting files merged all the overlapping samples vs. discarding them.

@qiyunzhu
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@antgonza This sounds a cool idea! I will look into it.

@qiyunzhu qiyunzhu self-assigned this Jan 26, 2021
@qiyunzhu qiyunzhu added the enhancement New feature or request label Jan 26, 2021
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