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BUG: alpha_rarefaction viz has lost sequencing depth data #359

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lizgehret opened this issue Jun 11, 2024 · 0 comments · Fixed by #360
Closed

BUG: alpha_rarefaction viz has lost sequencing depth data #359

lizgehret opened this issue Jun 11, 2024 · 0 comments · Fixed by #360
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bug-type:2|workaround-req Progress can't be made in the usual way.

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@lizgehret
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In 2024.5, the alpha rarefaction plot no longer contains sequencing depth data (i.e. x-axis data), so all of the diversity metric data is stacked at zero on the y-axis (see images below):
Screen Shot 2024-06-11 at 1 00 22 PM

Screen Shot 2024-06-11 at 1 05 44 PM

Original report was from this forum xref, but I confirmed this is happening with the alpha rarefaction plots in moving pictures & the cancer microbiome tutorials as well.

No recent changes have occurred within the visualizer functionality outside of the python 3.9 updates (PR link for reference), which don't seem to be related from my initial investigation.

@lizgehret lizgehret added the bug-type:3|stops-work It is no longer possible to use QIIME 2 in this way. label Jun 11, 2024
@github-project-automation github-project-automation bot moved this to Backlog in 2024.10 🎃 Jun 11, 2024
@lizgehret lizgehret moved this from Backlog to In Analysis in 2024.10 🎃 Jun 11, 2024
@lizgehret lizgehret added the bug-type:2|workaround-req Progress can't be made in the usual way. label Jun 11, 2024
@lizgehret lizgehret moved this from In Analysis to In Development in 2024.10 🎃 Jun 11, 2024
@lizgehret lizgehret removed the bug-type:3|stops-work It is no longer possible to use QIIME 2 in this way. label Jun 11, 2024
@lizgehret lizgehret moved this from In Development to Needs Review in 2024.10 🎃 Jun 20, 2024
@lizgehret lizgehret self-assigned this Jun 20, 2024
@ebolyen ebolyen assigned ebolyen and unassigned ebolyen Jun 20, 2024
@lizgehret lizgehret moved this from Needs Review to Changelog Needed in 2024.10 🎃 Jun 24, 2024
@lizgehret lizgehret moved this from Changelog Needed to Completed in 2024.10 🎃 Jun 26, 2024
@lizgehret lizgehret removed their assignment Jun 26, 2024
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Labels
bug-type:2|workaround-req Progress can't be made in the usual way.
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