chore: update pre-commit hooks #269
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| name: Tests | |
| on: | |
| pull_request: | |
| push: | |
| branches: [ main ] | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Setup mamba | |
| uses: conda-incubator/setup-miniconda@v2 | |
| id: setup_mamba | |
| continue-on-error: true | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| use-mamba: true | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge,${{ contains(matrix.python-version, 'pypy') && 'defaults' || 'nodefaults' }} | |
| channel-priority: ${{ contains(matrix.python-version, 'pypy') && 'flexible' || 'strict' }} | |
| activate-environment: graphblas | |
| auto-activate-base: false | |
| - name: Setup conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| id: setup_conda | |
| if: steps.setup_mamba.outcome == 'failure' | |
| continue-on-error: false | |
| with: | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge,${{ contains(matrix.python-version, 'pypy') && 'defaults' || 'nodefaults' }} | |
| channel-priority: ${{ contains(matrix.python-version, 'pypy') && 'flexible' || 'strict' }} | |
| activate-environment: graphblas | |
| auto-activate-base: false | |
| - name: Install dependencies | |
| run: | | |
| $(command -v mamba || command -v conda) install python-suitesparse-graphblas scipy pandas donfig pyyaml numpy python-graphblas \ | |
| pytest-cov pytest-randomly pytest-mpl networkx | |
| # matplotlib lxml pygraphviz pydot sympy # Extra networkx deps we don't need yet | |
| # Sometimes we prefer to use the latest release of NetworkX or the latest development from github | |
| # pip install git+https://github.com/networkx/networkx.git@main --no-deps | |
| pip install -e . --no-deps | |
| - name: PyTest | |
| run: | | |
| python -c 'import sys, graphblas_algorithms; assert "networkx" not in sys.modules' | |
| coverage run --branch -m pytest --color=yes -v --check-structure | |
| coverage report | |
| # NETWORKX_GRAPH_CONVERT=graphblas pytest --color=yes --pyargs networkx --cov --cov-append | |
| ./run_nx_tests.sh --color=yes --cov --cov-append | |
| coverage report | |
| coverage xml | |
| - name: Coverage | |
| uses: codecov/codecov-action@v3 |