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Dockerfile
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FROM ubuntu:xenial
MAINTAINER Bas Nijholt <[email protected]>
ENV LANG=C.UTF-8 LC_ALL=C.UTF-8
ENV PATH /opt/conda/bin:$PATH
RUN apt-get update --fix-missing && \
apt-get install -y \
# for miniconda
wget bzip2 ca-certificates curl git \
# for TeX
texlive-full python-pygments gnuplot make \
# for gcc
build-essential \
&& \
apt-get clean && \
rm -rf /var/lib/apt/lists/*
RUN wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-4.5.11-Linux-x86_64.sh -O ~/miniconda.sh && \
/bin/bash ~/miniconda.sh -b -p /opt/conda && \
rm ~/miniconda.sh && \
/opt/conda/bin/conda clean -tipsy && \
ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh && \
echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc
ENV TINI_VERSION v0.16.1
ADD https://github.com/krallin/tini/releases/download/${TINI_VERSION}/tini /usr/bin/tini
RUN chmod +x /usr/bin/tini
RUN mkdir /environments
COPY environment.yml /environments/
RUN conda-env create -f /environments/environment.yml && \
# ensure that we activate the environment in any shell (Gitlab CI uses 'sh')
echo "conda activate revtex-markdown-paper" >> ~/.bashrc
ENTRYPOINT [ "/usr/bin/tini", "--" ]
CMD [ "/bin/bash" ]