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[documentation] .env variable expansion #3610

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timhughes opened this issue Mar 12, 2019 · 1 comment
Closed

[documentation] .env variable expansion #3610

timhughes opened this issue Mar 12, 2019 · 1 comment

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@timhughes
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This is a documentation issue as the underlying issue is with dotenv's parser. I think we just need an example and a cautionary note about enclosing variables in .env files in {} or a link to the dotenv docs https://github.com/theskumar/python-dotenv#usages although they don't exactly highlight this failure case either

Issue description

dotenv doesn't load .env files as expected

Expected result

hughest@argon [0] $ echo $PATH
/home/hughest/.local/share/virtualenvs/jupyter_notebooks-xrlszz2Q/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/usr/bin:/home/hughest/.pyenv/libexec:/home/hughest/.pyenv/plugins/python-build/bin:/home/hughest/.pyenv/plugins/pyenv-virtualenvwrapper/bin:/home/hughest/.cargo/bin:/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/home/hughest/.cargo/bin:/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/usr/libexec/python3-sphinx:/usr/share/Modules/bin:/home/hughest/.cargo/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/opt/puppetlabs/bin:/home/hughest/.local/bin:/home/hughest/bin:/home/hughest/.local/bin:/home/hughest/bin:~/applications/hadoop/bin

Actual result

PATH env var gets overwritten and causes crazyness

hughest@argon [0] $ pipenv shell
Loading .env environment variables…
Launching subshell in virtual environment…
bash: id: command not found
bash: id: command not found
 . /home/hughest/.local/share/virtualenvs/jupyter_notebooks-xrlszz2Q/bin/activate
/usr/libexec/grepconf.sh: line 5: grep: command not found
/usr/libexec/grepconf.sh: line 5: grep: command not found
/usr/libexec/grepconf.sh: line 5: grep: command not found
bash: flatpak: command not found
bash: grep: command not found
bash: sed: command not found
bash: grep: command not found...
Install package 'grep' to provide command 'grep'? [N/y] ^Cbash: __vte_prompt_command: command not found...
[hughest@argon jupyter_notebooks]$ pipenv help^C
bash: __vte_prompt_command: command not found...
[hughest@argon jupyter_notebooks]$ exit

Notice the '$PATH' is not evaluated

hughest@argon [0] $ echo $PATH
/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/bin:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/bin:/usr/share/Modules/bin:$PATH:~/applications/hadoop/bin:/opt/puppetlabs/bin

Steps to replicate

Here is my .env file

export PATH=$PATH:~/applications/hadoop/bin
export JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.161-0.b14.fc27.x86_64/jre/
export LD_LIBRARY_PATH=~/applications/hadoop/lib/native/

It is fixed by adding curly braces around the variable

export PATH=${PATH}:~/applications/hadoop/bin
export JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.161-0.b14.fc27.x86_64/jre/
export LD_LIBRARY_PATH=~/applications/hadoop/lib/native/

Pipenv version: '2018.11.26'

Pipenv location: '/usr/lib/python3.7/site-packages/pipenv'

Python location: '/usr/bin/python3'

Python installations found:

  • 3.7.2: /usr/bin/python3
  • 3.7.2: /usr/bin/python3.7m
  • 3.7.2: /home/hughest/.pyenv/versions/3.7.2/bin/python3.7m
  • 3.7.2: /home/hughest/.pyenv/versions/3.7.2/bin/python3.7
  • 3.7.0: /home/hughest/.pyenv/versions/3.7.0/bin/python3.7m
  • 3.7.0: /home/hughest/.pyenv/versions/3.7.0/bin/python3.7
  • 3.6.8: /home/hughest/.local/share/virtualenvs/jupyter_notebooks-xrlszz2Q/bin/python3.6
  • 3.6.8: /usr/bin/python3.6
  • 3.6.8: /usr/bin/python3.6m
  • 3.6.4: /home/hughest/.pyenv/versions/3.6.4/bin/python3.6m
  • 3.6.4: /home/hughest/.pyenv/versions/3.6.4/bin/python3.6
  • 3.5.6: /usr/bin/python3.5
  • 3.5.6: /usr/bin/python3.5m
  • 3.5.3: /usr/bin/pypy3
  • 3.4.9: /usr/bin/python3.4
  • 3.4.9: /usr/bin/python3.4m
  • 2.7.15: /usr/bin/python
  • 2.7.15: /home/hughest/.pyenv/versions/2.7.15/bin/python2.7
  • 2.7.13: /usr/bin/pypy
  • 2.6.9: /usr/bin/python2.6

PEP 508 Information:

{'implementation_name': 'cpython',
 'implementation_version': '3.7.2',
 'os_name': 'posix',
 'platform_machine': 'x86_64',
 'platform_python_implementation': 'CPython',
 'platform_release': '4.20.13-200.fc29.x86_64',
 'platform_system': 'Linux',
 'platform_version': '#1 SMP Wed Feb 27 19:42:55 UTC 2019',
 'python_full_version': '3.7.2',
 'python_version': '3.7',
 'sys_platform': 'linux'}

System environment variables:

  • LS_COLORS
  • LD_LIBRARY_PATH
  • TERMINATOR_UUID
  • XDG_MENU_PREFIX
  • MODULES_RUN_QUARANTINE
  • LANG
  • GDM_LANG
  • HISTCONTROL
  • DISPLAY
  • GUESTFISH_RESTORE
  • HOSTNAME
  • PYENV_ROOT
  • OLDPWD
  • EDITOR
  • PATH_modshare
  • LOADEDMODULES_modshare
  • COLORTERM
  • GUESTFISH_INIT
  • USERNAME
  • JAVA_HOME
  • KDEDIRS
  • PYENV_HOOK_PATH
  • GOENV_SHELL
  • XDG_VTNR
  • GIO_LAUNCHED_DESKTOP_FILE_PID
  • SSH_AUTH_SOCK
  • VIRTUAL_ENV
  • S_COLORS
  • XDG_SESSION_ID
  • MODULES_CMD
  • USER
  • ENV
  • PYENV_DIR
  • GUESTFISH_PS1
  • DESKTOP_SESSION
  • RBENV_SHELL
  • GOPATH
  • PIP_PYTHON_PATH
  • PWD
  • MODULES_LMCONFLICT_modshare
  • HOME
  • SSH_AGENT_PID
  • PYENV_VERSION
  • XDG_SESSION_TYPE
  • BASH_ENV
  • XDG_DATA_DIRS
  • _LMFILES__modshare
  • HTML_TIDY
  • SVN_EDITOR
  • PIPENV_ACTIVE
  • TERMINATOR_DBUS_NAME
  • XDG_SESSION_DESKTOP
  • EMAIL
  • SPARK_HOME
  • GJS_DEBUG_OUTPUT
  • PROJECT_HOME
  • LOADEDMODULES
  • TERMINATOR_DBUS_PATH
  • MAIL
  • MODULES_LMCONFLICT
  • WINDOWPATH
  • SHELL
  • VTE_VERSION
  • TERM
  • RBENV_ROOT
  • PS1_RB
  • QT_IM_MODULE
  • XMODIFIERS
  • XDG_CURRENT_DESKTOP
  • GIO_LAUNCHED_DESKTOP_FILE
  • PYTHONDONTWRITEBYTECODE
  • XDG_SEAT
  • PYENV_SHELL
  • SHLVL
  • PS1_PY
  • MANPATH
  • MODULEPATH
  • GDMSESSION
  • LOGNAME
  • PIP_DISABLE_PIP_VERSION_CHECK
  • DBUS_SESSION_BUS_ADDRESS
  • GIT_ASKPASS
  • XDG_RUNTIME_DIR
  • XAUTHORITY
  • MODULEPATH_modshare
  • GOENV_ROOT
  • PATH
  • _LMFILES_
  • GUESTFISH_OUTPUT
  • MODULESHOME
  • HISTSIZE
  • GJS_DEBUG_TOPICS
  • SESSION_MANAGER
  • LESSOPEN
  • BASH_FUNC_module%%
  • BASH_FUNC__module_raw%%
  • BASH_FUNC_switchml%%
  • BASH_FUNC_scl%%
  • PIP_SHIMS_BASE_MODULE
  • PYTHONFINDER_IGNORE_UNSUPPORTED

Pipenv–specific environment variables:

  • PIPENV_ACTIVE: 1

Debug–specific environment variables:

  • PATH: /usr/bin:/home/hughest/.pyenv/libexec:/home/hughest/.pyenv/plugins/python-build/bin:/home/hughest/.pyenv/plugins/pyenv-virtualenvwrapper/bin:/home/hughest/.local/share/virtualenvs/jupyter_notebooks-xrlszz2Q/bin:/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/usr/bin:/home/hughest/.pyenv/libexec:/home/hughest/.pyenv/plugins/python-build/bin:/home/hughest/.pyenv/plugins/pyenv-virtualenvwrapper/bin:/home/hughest/.cargo/bin:/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/home/hughest/.cargo/bin:/home/hughest/.cargo/bin:/home/hughest/applications/spark/bin:/home/hughest/.npm-global/bin:/home/hughest/go/bin:/home/hughest/.goenv/shims:/home/hughest/.goenv/bin:/home/hughest/.rbenv/shims:/home/hughest/.rbenv/bin:/home/hughest/.pyenv/shims:/home/hughest/.pyenv/bin:/usr/libexec/python3-sphinx:/usr/share/Modules/bin:/home/hughest/.cargo/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/opt/puppetlabs/bin:/home/hughest/.local/bin:/home/hughest/bin:/home/hughest/.local/bin:/home/hughest/bin:~/applications/hadoop/bin
  • SHELL: /bin/bash
  • EDITOR: vim
  • LANG: en_GB.UTF-8
  • PWD: /home/hughest/git/jupyter_notebooks
  • VIRTUAL_ENV: /home/hughest/.local/share/virtualenvs/jupyter_notebooks-xrlszz2Q

Contents of Pipfile ('/home/hughest/git/jupyter_notebooks/Pipfile'):

[[source]]
url = "https://pypi.org/simple"
verify_ssl = true
name = "pypi"

[packages]
pandas = "*"
jupyter = "*"
pyarrow = "*"
bokeh = "*"
matplotlib = "*"
qgrid = "*"
#sparkmagic = "*"

[dev-packages]

[requires]
python_version = "3.6"

Contents of Pipfile.lock ('/home/hughest/git/jupyter_notebooks/Pipfile.lock'):

{
    "_meta": {
        "hash": {
            "sha256": "4ec730c026d8b3ceb870f7b4cb66c5c3aa4de9254dad25158a5d233c439b8df5"
        },
        "pipfile-spec": 6,
        "requires": {
            "python_version": "3.6"
        },
        "sources": [
            {
                "name": "pypi",
                "url": "https://pypi.org/simple",
                "verify_ssl": true
            }
        ]
    },
    "default": {
        "attrs": {
            "hashes": [
                "sha256:69c0dbf2ed392de1cb5ec704444b08a5ef81680a61cb899dc08127123af36a79",
                "sha256:f0b870f674851ecbfbbbd364d6b5cbdff9dcedbc7f3f5e18a6891057f21fe399"
            ],
            "version": "==19.1.0"
        },
        "backcall": {
            "hashes": [
                "sha256:38ecd85be2c1e78f77fd91700c76e14667dc21e2713b63876c0eb901196e01e4",
                "sha256:bbbf4b1e5cd2bdb08f915895b51081c041bac22394fdfcfdfbe9f14b77c08bf2"
            ],
            "version": "==0.1.0"
        },
        "bleach": {
            "hashes": [
                "sha256:213336e49e102af26d9cde77dd2d0397afabc5a6bf2fed985dc35b5d1e285a16",
                "sha256:3fdf7f77adcf649c9911387df51254b813185e32b2c6619f690b593a617e19fa"
            ],
            "version": "==3.1.0"
        },
        "bokeh": {
            "hashes": [
                "sha256:ceeb6a75afc1b2de00c2b8b6da121dec3fb77031326897b80d4375a70e96aebf"
            ],
            "index": "pypi",
            "version": "==1.0.4"
        },
        "cycler": {
            "hashes": [
                "sha256:1d8a5ae1ff6c5cf9b93e8811e581232ad8920aeec647c37316ceac982b08cb2d",
                "sha256:cd7b2d1018258d7247a71425e9f26463dfb444d411c39569972f4ce586b0c9d8"
            ],
            "version": "==0.10.0"
        },
        "decorator": {
            "hashes": [
                "sha256:33cd704aea07b4c28b3eb2c97d288a06918275dac0ecebdaf1bc8a48d98adb9e",
                "sha256:cabb249f4710888a2fc0e13e9a16c343d932033718ff62e1e9bc93a9d3a9122b"
            ],
            "version": "==4.3.2"
        },
        "defusedxml": {
            "hashes": [
                "sha256:24d7f2f94f7f3cb6061acb215685e5125fbcdc40a857eff9de22518820b0a4f4",
                "sha256:702a91ade2968a82beb0db1e0766a6a273f33d4616a6ce8cde475d8e09853b20"
            ],
            "version": "==0.5.0"
        },
        "entrypoints": {
            "hashes": [
                "sha256:589f874b313739ad35be6e0cd7efde2a4e9b6fea91edcc34e58ecbb8dbe56d19",
                "sha256:c70dd71abe5a8c85e55e12c19bd91ccfeec11a6e99044204511f9ed547d48451"
            ],
            "version": "==0.3"
        },
        "ipykernel": {
            "hashes": [
                "sha256:0aeb7ec277ac42cc2b59ae3d08b10909b2ec161dc6908096210527162b53675d",
                "sha256:0fc0bf97920d454102168ec2008620066878848fcfca06c22b669696212e292f"
            ],
            "version": "==5.1.0"
        },
        "ipython": {
            "hashes": [
                "sha256:06de667a9e406924f97781bda22d5d76bfb39762b678762d86a466e63f65dc39",
                "sha256:5d3e020a6b5f29df037555e5c45ab1088d6a7cf3bd84f47e0ba501eeb0c3ec82"
            ],
            "markers": "python_version >= '3.3'",
            "version": "==7.3.0"
        },
        "ipython-genutils": {
            "hashes": [
                "sha256:72dd37233799e619666c9f639a9da83c34013a73e8bbc79a7a6348d93c61fab8",
                "sha256:eb2e116e75ecef9d4d228fdc66af54269afa26ab4463042e33785b887c628ba8"
            ],
            "version": "==0.2.0"
        },
        "ipywidgets": {
            "hashes": [
                "sha256:0f2b5cde9f272cb49d52f3f0889fdd1a7ae1e74f37b48dac35a83152780d2b7b",
                "sha256:a3e224f430163f767047ab9a042fc55adbcab0c24bbe6cf9f306c4f89fdf0ba3"
            ],
            "version": "==7.4.2"
        },
        "jedi": {
            "hashes": [
                "sha256:2bb0603e3506f708e792c7f4ad8fc2a7a9d9c2d292a358fbbd58da531695595b",
                "sha256:2c6bcd9545c7d6440951b12b44d373479bf18123a401a52025cf98563fbd826c"
            ],
            "version": "==0.13.3"
        },
        "jinja2": {
            "hashes": [
                "sha256:74c935a1b8bb9a3947c50a54766a969d4846290e1e788ea44c1392163723c3bd",
                "sha256:f84be1bb0040caca4cea721fcbbbbd61f9be9464ca236387158b0feea01914a4"
            ],
            "version": "==2.10"
        },
        "jsonschema": {
            "hashes": [
                "sha256:0c0a81564f181de3212efa2d17de1910f8732fa1b71c42266d983cd74304e20d",
                "sha256:a5f6559964a3851f59040d3b961de5e68e70971afb88ba519d27e6a039efff1a"
            ],
            "version": "==3.0.1"
        },
        "jupyter": {
            "hashes": [
                "sha256:3e1f86076bbb7c8c207829390305a2b1fe836d471ed54be66a3b8c41e7f46cc7",
                "sha256:5b290f93b98ffbc21c0c7e749f054b3267782166d72fa5e3ed1ed4eaf34a2b78",
                "sha256:d9dc4b3318f310e34c82951ea5d6683f67bed7def4b259fafbfe4f1beb1d8e5f"
            ],
            "index": "pypi",
            "version": "==1.0.0"
        },
        "jupyter-client": {
            "hashes": [
                "sha256:b5f9cb06105c1d2d30719db5ffb3ea67da60919fb68deaefa583deccd8813551",
                "sha256:c44411eb1463ed77548bc2d5ec0d744c9b81c4a542d9637c7a52824e2121b987"
            ],
            "version": "==5.2.4"
        },
        "jupyter-console": {
            "hashes": [
                "sha256:308ce876354924fb6c540b41d5d6d08acfc946984bf0c97777c1ddcb42e0b2f5",
                "sha256:cc80a97a5c389cbd30252ffb5ce7cefd4b66bde98219edd16bf5cb6f84bb3568"
            ],
            "version": "==6.0.0"
        },
        "jupyter-core": {
            "hashes": [
                "sha256:927d713ffa616ea11972534411544589976b2493fc7e09ad946e010aa7eb9970",
                "sha256:ba70754aa680300306c699790128f6fbd8c306ee5927976cbe48adacf240c0b7"
            ],
            "version": "==4.4.0"
        },
        "kiwisolver": {
            "hashes": [
                "sha256:0ee4ed8b3ae8f5f712b0aa9ebd2858b5b232f1b9a96b0943dceb34df2a223bc3",
                "sha256:0f7f532f3c94e99545a29f4c3f05637f4d2713e7fd91b4dd8abfc18340b86cd5",
                "sha256:1a078f5dd7e99317098f0e0d490257fd0349d79363e8c923d5bb76428f318421",
                "sha256:1aa0b55a0eb1bd3fa82e704f44fb8f16e26702af1a073cc5030eea399e617b56",
                "sha256:2874060b91e131ceeff00574b7c2140749c9355817a4ed498e82a4ffa308ecbc",
                "sha256:379d97783ba8d2934d52221c833407f20ca287b36d949b4bba6c75274bcf6363",
                "sha256:3b791ddf2aefc56382aadc26ea5b352e86a2921e4e85c31c1f770f527eb06ce4",
                "sha256:4329008a167fac233e398e8a600d1b91539dc33c5a3eadee84c0d4b04d4494fa",
                "sha256:45813e0873bbb679334a161b28cb9606d9665e70561fd6caa8863e279b5e464b",
                "sha256:53a5b27e6b5717bdc0125338a822605084054c80f382051fb945d2c0e6899a20",
                "sha256:574f24b9805cb1c72d02b9f7749aa0cc0b81aa82571be5201aa1453190390ae5",
                "sha256:66f82819ff47fa67a11540da96966fb9245504b7f496034f534b81cacf333861",
                "sha256:79e5fe3ccd5144ae80777e12973027bd2f4f5e3ae8eb286cabe787bed9780138",
                "sha256:83410258eb886f3456714eea4d4304db3a1fc8624623fc3f38a487ab36c0f653",
                "sha256:8b6a7b596ce1d2a6d93c3562f1178ebd3b7bb445b3b0dd33b09f9255e312a965",
                "sha256:9576cb63897fbfa69df60f994082c3f4b8e6adb49cccb60efb2a80a208e6f996",
                "sha256:95a25d9f3449046ecbe9065be8f8380c03c56081bc5d41fe0fb964aaa30b2195",
                "sha256:a424f048bebc4476620e77f3e4d1f282920cef9bc376ba16d0b8fe97eec87cde",
                "sha256:aaec1cfd94f4f3e9a25e144d5b0ed1eb8a9596ec36d7318a504d813412563a85",
                "sha256:acb673eecbae089ea3be3dcf75bfe45fc8d4dcdc951e27d8691887963cf421c7",
                "sha256:b15bc8d2c2848a4a7c04f76c9b3dc3561e95d4dabc6b4f24bfabe5fd81a0b14f",
                "sha256:b1c240d565e977d80c0083404c01e4d59c5772c977fae2c483f100567f50847b",
                "sha256:c595693de998461bcd49b8d20568c8870b3209b8ea323b2a7b0ea86d85864694",
                "sha256:ce3be5d520b4d2c3e5eeb4cd2ef62b9b9ab8ac6b6fedbaa0e39cdb6f50644278",
                "sha256:e0f910f84b35c36a3513b96d816e6442ae138862257ae18a0019d2fc67b041dc",
                "sha256:ea36e19ac0a483eea239320aef0bd40702404ff8c7e42179a2d9d36c5afcb55c",
                "sha256:efabbcd4f406b532206b8801058c8bab9e79645b9880329253ae3322b7b02cd5",
                "sha256:f923406e6b32c86309261b8195e24e18b6a8801df0cfc7814ac44017bfcb3939"
            ],
            "version": "==1.0.1"
        },
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}
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frostming commented Mar 12, 2019 •
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Would you like to send a PR? (Ignore my previous side comment.

This was referenced Jan 15, 2020
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