cli: support --fix --dry-run
#223
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Closes #220.
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di
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### Added * CLI: The `--fix` flag has been added, allowing users to attempt to automatically upgrade any vulnerable dependencies to the first safe version available ([#212](pypa/pip-audit#212), [#222](pypa/pip-audit#222)) * CLI: The combination of `--fix` and `--dry-run` is now supported, causing `pip-audit` to perform the auditing step but not any resulting fix steps ([#223](pypa/pip-audit#223)) * CLI: The `--require-hashes` flag has been added which can be used in conjunction with `-r` to check that all requirements in the file have an associated hash ([#229](pypa/pip-audit#229)) * CLI: The `--index-url` flag has been added, allowing users to use custom package indices when running with the `-r` flag ([#238](pypa/pip-audit#238)) * CLI: The `--extra-index-url` flag has been added, allowing users to use multiple package indices when running with the `-r` flag ([#238](pypa/pip-audit#238)) ### Changed * `pip-audit`'s minimum Python version is now 3.7. * CLI: The default output format is now correctly pluralized ([#221](pypa/pip-audit#221)) * Output formats: The SBOM output formats (`--format=cyclonedx-xml` and `--format=cyclonedx-json`) now use CycloneDX [Schema 1.4](https://cyclonedx.org/docs/1.4/xml/) ([#216](pypa/pip-audit#216)) * Vulnerability sources: When using PyPI as a vulnerability service, any hashes provided in a requirements file are checked against those reported by PyPI ([#229](pypa/pip-audit#229)) * Vulnerability sources: `pip-audit` now uniques each result based on its alias set, reducing the amount of duplicate information in the default columnar output format ([#232](pypa/pip-audit#232)) * CLI: `pip-audit` now prints its output more frequently, including when there are no discovered vulnerabilities but packages were skipped. Similarly, "manifest" output formats (JSON, CycloneDX) are now emitted unconditionally ([#240](pypa/pip-audit#240)) ### Fixed * CLI: A regression causing excess output during `pip audit -r` was fixed ([#226](pypa/pip-audit#226))
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WIP, needs testing.Closes #220.