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README.Rmd
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---
output: rmarkdown::github_document
always_allow_html: true
---
```{r, echo = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "",
fig.path = "inst/extdata/"
)
```
<!--
```{r, out.width = '20%', echo = FALSE}
knitr::include_graphics("https://raw.githubusercontent.com/aravind-j/augmentedRCBD/master/inst/extdata/augmentedRCBD.png")
```
-->
## `augmentedRCBD`: Analysis of Augmented Randomised Complete Block Designs <img src="https://raw.githubusercontent.com/aravind-j/augmentedRCBD/master/inst/extdata/augmentedRCBD.png" align="right" alt="logo" width="173" height = "200" style = "border: none; float: right;">
```{r,echo = FALSE, message = FALSE}
devtools::load_all(".")
```
###### Version : [`r getNamespaceVersion("augmentedRCBD")`](https://aravind-j.github.io/augmentedRCBD/articles/Data_Analysis_with_augmentedRCBD.html#install); Copyright (C) 2015-2021: [ICAR-NBPGR](http://www.nbpgr.ernet.in/); License: [GPL-2|GPL-3](https://www.r-project.org/Licenses/)
##### *Aravind, J.^1^, Mukesh Sankar, S.^2^, Wankhede, D. P.^3^, and Kaur, V.^4^*
1. Division of Germplasm Conservation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
2. Division of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi.
3. Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
4. Division of Germplasm Evaluation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.
***
[](https://cran.r-project.org/)
[](https://www.gnu.org/licenses/gpl-3.0)
[](https://cran.r-project.org/package=augmentedRCBD)
[](https://cran.r-project.org/package=augmentedRCBD)
[](https://CRAN.R-project.org/package=augmentedRCBD)
```{r, results='asis', echo=FALSE}
dver <- ifelse(test = gsub("(.\\.)(\\d+)(\\..)", "", getNamespaceVersion("augmentedRCBD")) != "",
yes = getNamespaceVersion("augmentedRCBD"),
no = gsub("Version:\\s*", "", readLines(paste0("https://raw.githubusercontent.com/", "aravind-j/augmentedRCBD", "/master/DESCRIPTION"))[grep("Version:", readLines(paste0("https://raw.githubusercontent.com/", "aravind-j/augmentedRCBD", "/master/DESCRIPTION")))]))
cat(paste("[![develVersion](https://img.shields.io/badge/devel%20version-", dver, "-orange.svg)](https://github.com/aravind-j/augmentedRCBD)", sep = ""))
```
[](https://github.com/aravind-j/augmentedRCBD)
[](https://github.com/aravind-j/augmentedRCBD/actions)
[](https://www.repostatus.org/#inactive)
[](https://lifecycle.r-lib.org/articles/stages.html#stable)
[)`-yellowgreen.svg)](https://github.com/aravind-j/augmentedRCBD)
[](https://doi.org/10.5281/zenodo.1310011)
[](https://aravind-j.github.io/augmentedRCBD/)
[](https://github.com/aravind-j/google-analytics-beacon)
<!-- [](https://github.com/aravind-j/augmentedRCBD) -->
<!-- [] -->
<!-- [](https://www.rdocumentation.org/packages/augmentedRCBD) -->
***
## Description
`r gsub("(<doi:)(.+)(>)", "[doi:\\2](https://doi.org/\\2)", gsub("\\n", " ", packageDescription("augmentedRCBD", fields = "Description")))`
## Installation
The package can be installed from CRAN as follows:
```{r, eval=FALSE}
# Install from CRAN
install.packages('augmentedRCBD', dependencies=TRUE)
```
The development version can be installed from github as follows:
```{r, eval=FALSE}
# Install development version from Github
if (!require('devtools')) install.packages('devtools')
devtools::install_github("aravind-j/augmentedRCBD")
```
## Detailed tutorial
For a detailed tutorial (vignette) on how to used this package type:
```{r, eval=FALSE}
browseVignettes(package = 'augmentedRCBD')
```
The vignette for the latest version is also available [online](https://aravind-j.github.io/augmentedRCBD/articles/Data_Analysis_with_augmentedRCBD.html).
## What's new
To know whats new in this version type:
```{r, eval=FALSE}
news(package='augmentedRCBD')
```
## Links
[CRAN page](https://cran.r-project.org/package=augmentedRCBD)
[Github page](https://github.com/aravind-j/augmentedRCBD)
[Documentation website](https://aravind-j.github.io/augmentedRCBD/)
[Zenodo DOI](https://doi.org/10.5281/zenodo.1310011)
## CRAN checks
```{r, echo = FALSE}
pkgname <- "augmentedRCBD"
osdf <-
rbind(data.frame(OS = "Linux",
Flavour = c("r-devel-linux-x86_64-debian-clang",
"r-devel-linux-x86_64-debian-gcc",
"r-devel-linux-x86_64-fedora-clang",
"r-devel-linux-x86_64-fedora-gcc",
"r-patched-linux-x86_64",
"r-release-linux-x86_64")),
data.frame(OS = "Solaris",
Flavour = c("r-patched-solaris-x86")),
data.frame(OS = "Windows",
Flavour = c("r-devel-windows-ix86+x86_64",
"r-release-windows-ix86+x86_64",
"r-oldrel-windows-ix86+x86_64")),
data.frame(OS = "macOS",
Flavour = c("r-release-macos-x86_64",
"r-oldrel-macos-x86_64")))
osdf$`CRAN check` <- paste("[![CRAN check - ", osdf$Flavour, "]",
"(https://cranchecks.info/badges/flavor/",
osdf$Flavour, "/", pkgname, ")]",
"(https://cran.r-project.org/web/checks/check_results_",
pkgname, ".html)",
sep = "")
```
```{r, echo = FALSE, results='asis', message=FALSE}
library(kableExtra, warn.conflicts = FALSE)
kosdf <- kbl(osdf[, c("Flavour", "CRAN check")], row.names = FALSE)
kosdf2 <- kable_styling(kosdf, bootstrap_options = c("striped", "hover"),
full_width = F, position = "left")
pack_rows(kosdf2, index = c("[](https://cran.r-project.org/web/checks/check_results_ammistability.html)" = 6,
"[](https://cran.r-project.org/web/checks/check_results_ammistability.html)" = 1,
"[](https://cran.r-project.org/web/checks/check_results_ammistability.html)" = 3,
"[](https://cran.r-project.org/web/checks/check_results_ammistability.html)" = 2))
```
## Citing `augmentedRCBD`
To cite the methods in the package use:
```{r, eval = FALSE}
citation("augmentedRCBD")
```
```{r, echo = FALSE}
detach("package:augmentedRCBD", unload=TRUE)
suppressPackageStartupMessages(library(augmentedRCBD))
cit <- citation("augmentedRCBD")
# yr <- format(Sys.Date(), "%Y")
# cit[1]$year <- yr
# oc <- class(cit)
#
# cit <- unclass(cit)
# attr(cit[[1]],"textVersion") <- gsub("\\(\\)",
# paste("\\(", yr, "\\)", sep = ""),
# attr(cit[[1]],"textVersion"))
# class(cit) <- oc
cit
```