Add 2021 posth sci adv #626
Workflow file for this run
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| name: trident validate | |
| # Trigger the workflow on push or pull request, but only for the master branch | |
| on: | |
| pull_request: | |
| push: | |
| branches: [master] | |
| jobs: | |
| validate: | |
| name: validate packages | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install trident | |
| run: | | |
| wget https://github.com/poseidon-framework/poseidon-hs/releases/latest/download/trident-Linux | |
| chmod +x trident-Linux | |
| - name: Clone data repo | |
| uses: actions/checkout@v3 | |
| with: | |
| path: data | |
| - name: Validation | |
| run: ./trident-Linux validate -d data --ignoreGeno --logMode VerboseLog | |
| - name: Check for displaced files | |
| run: ./checkForDisplacedFiles.sh | |
| working-directory: ./data | |
| - name: Check if all registered files are actually LFS pointers | |
| run: git lfs fsck --pointers | |
| working-directory: ./data | |
| - name: Check if all files have UTF-8 encoding and Unix line endings | |
| run: ./checkFileEncoding.sh | |
| working-directory: ./data | |
| - name: Check if any .janno and .ssf files start with a single or double-quote character | |
| run: ./checkQuotes.sh | |
| working-directory: ./data |