Error installing snvphyl-tools using conda

[PHemarajata]

Hi, I ran this command: conda install snvphyl-tools
I received the following error:

Collecting package metadata: done
Solving environment: failed

PackagesNotFoundError: The following packages are not available from current channels:

• snvphyl-tools

Current channels:

• https://conda.anaconda.org/conda-forge/osx-64
• https://conda.anaconda.org/conda-forge/noarch
• https://conda.anaconda.org/bioconda/osx-64
• https://conda.anaconda.org/bioconda/noarch
• https://repo.anaconda.com/pkgs/main/osx-64
• https://repo.anaconda.com/pkgs/main/noarch
• https://repo.anaconda.com/pkgs/free/osx-64
• https://repo.anaconda.com/pkgs/free/noarch
• https://repo.anaconda.com/pkgs/r/osx-64
• https://repo.anaconda.com/pkgs/r/noarch

To search for alternate channels that may provide the conda package you're
looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

Did I do anything wrong? Any help is appreciated. Thank you!

[apetkau]

Hello @PHemarajata you will have to use the bioconda channel (along with conda-forge), either adding them to your default channels or running the install like:

conda install -c bioconda -c conda-forge snvphyl-tools

[ericenns]

Just to add you likely want to follow the installation instructions for bioconda (https://bioconda.github.io/user/install.html#set-up-channels). Just adding the bioconda channel might work, but some bioconda package dependencies are located in other channels.

[PHemarajata]

Hi @apetkau I tried your command and still got the same error. I'm running this on MacOS Catalina.

Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

• snvphyl-tools

Current channels:

• https://conda.anaconda.org/bioconda/osx-64
• https://conda.anaconda.org/bioconda/noarch
• https://conda.anaconda.org/conda-forge/osx-64
• https://conda.anaconda.org/conda-forge/noarch
• https://repo.anaconda.com/pkgs/main/osx-64
• https://repo.anaconda.com/pkgs/main/noarch
• https://repo.anaconda.com/pkgs/r/osx-64
• https://repo.anaconda.com/pkgs/r/noarch

To search for alternate channels that may provide the conda package you're
looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

[apetkau]

Hello @PHemarajata. Currently the snvphyl-tools conda package is only available for Linux (you can see the available packages here https://anaconda.org/bioconda/snvphyl-tools/files). So, you will not be able to install on MacOS.

I created another issue #12 but we won't be able to work on this at the current moment.