From 3a32b5d0d40086945b48812baf8669756f6a20f2 Mon Sep 17 00:00:00 2001 From: peterjc Date: Wed, 19 Mar 2014 14:36:16 +0000 Subject: [PATCH] Include makeprofiledb in tar-ball --- tools/ncbi_blast_plus/make_ncbi_blast_plus.sh | 16 ++++++++++++++-- 1 file changed, 14 insertions(+), 2 deletions(-) diff --git a/tools/ncbi_blast_plus/make_ncbi_blast_plus.sh b/tools/ncbi_blast_plus/make_ncbi_blast_plus.sh index 9bf7856d..cb9f50bb 100755 --- a/tools/ncbi_blast_plus/make_ncbi_blast_plus.sh +++ b/tools/ncbi_blast_plus/make_ncbi_blast_plus.sh @@ -31,6 +31,7 @@ tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_blastx_wrapper.xml tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_tblastn_wrapper.xml tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_tblastx_wrapper.xml tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_makeblastdb.xml +tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_makeprofiledb.xml tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/check_no_duplicates.py tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_blastdbcmd_info.xml tar -rf ncbi_blast_plus.tar tools/ncbi_blast_plus/ncbi_rpsblast_wrapper.xml @@ -108,11 +109,22 @@ tar -rf ncbi_blast_plus.tar test-data/segmasker_four_human.maskinfo-asn1 tar -rf ncbi_blast_plus.tar test-data/segmasker_four_human.maskinfo-asn1-binary tar -rf ncbi_blast_plus.tar test-data/convert2blastmask_four_human_masked.maskinfo-asn1 tar -rf ncbi_blast_plus.tar test-data/convert2blastmask_four_human_masked.maskinfo-asn1-binary - +tar -rf ncbi_blast_plus.tar test-data/cd00003.smp +tar -rf ncbi_blast_plus.tar test-data/cd00008.smp +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.aux +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.loo +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.pin +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.psi +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.rps +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.freq +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.phr +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.psd +tar -rf ncbi_blast_plus.tar test-data/cd00003_and_cd00008.psq +tar -rf ncbi_blast_plus.tar test-data/empty_file.dat #Zip the tar file gzip ncbi_blast_plus.tar #Check the output -echo "Expect a tar-ball 85 files, have:" +echo "Expect a tar-ball 98 files, have:" tar -tzf ncbi_blast_plus.tar.gz | wc -l