run_paramset_clm5

#!/bin/bash

# Clone latest development branch from CTSM repository
#git clone --origin escomp https://github.com/ESCOMP/ctsm.git ctsm_ParamEns
#cd ctsm_ParamEns
#git checkout -b ctsm_ParamEns master
#./manage_externals/checkout_externals

# Note: do not run this while in python 3 env
# CESM builds and submit need to be on python 2

export USER="kdagon"

#export CODENAME="clm5.0"
export CODENAME="ctsm_ParamEns"
export NAME="hydro_ensemble_LHC"

cd /glade/work/$USER/$CODENAME
pwd

cd cime/scripts
pwd

cd $NAME
pwd

## IMPORTANT TO MODIFY THIS EACH TIME ##
#export EXPTNAME=${NAME}_$i
#export EXPTNAME=${NAME}_${i}_hybrid
#export EXPTNAME="${NAME}_default_params"
#export EXPTNAME="test_paramset_SVD_v4"
export EXPTNAME="test_paramset_SVD_v5"
echo $EXPTNAME

# Remove existing output
#rm -rf /glade/scratch/$USER/$EXPTNAME
#rm -rf /glade/scratch/$USER/archive/$EXPTNAME

# Remove existing working directories
#rm -rf $EXPTNAME

../create_newcase --run-unsupported --compset I2000Clm50Sp --res f45_f45 --case $EXPTNAME --project P08010000
#../create_newcase --run-unsupported --compset I2000Clm50Sp --res f45_f45 --case $EXPTNAME --project P54048000

cd $EXPTNAME

./xmlchange JOB_QUEUE=regular
./xmlchange JOB_WALLCLOCK_TIME=3:00:00

./xmlchange NTASKS_CPL=-4
./xmlchange NTASKS_OCN=-4
./xmlchange NTASKS_WAV=-4
./xmlchange NTASKS_GLC=-4
./xmlchange NTASKS_ICE=-4
./xmlchange NTASKS_ROF=-4
./xmlchange NTASKS_LND=-4

./xmlchange CONTINUE_RUN=FALSE
./xmlchange RESUBMIT=0
./xmlchange STOP_N=20
./xmlchange STOP_OPTION=nyears

./xmlchange BUILD_COMPLETE="TRUE"
./xmlchange EXEROOT="/glade/work/kdagon/CLM5_PPE/codebase_$NAME/bld/"

./xmlchange DATM_CLMNCEP_YR_START=2000
./xmlchange DATM_CLMNCEP_YR_END=2004

# Setup case (creates user_nl_* files)
./case.setup

# Generate param files for PFT-dependent params - do this ahead (for now)
# Set params file
pftfile="/glade/u/home/$USER/pft_files/${NAME}/${EXPTNAME}.nc"

# Make changes to netcdf file through ncl script pft_var_2.ncl

# Set params file in namelist
uclm="paramfile='$pftfile'"               
echo  $uclm >> user_nl_clm

# If not PFT-dependent, edit the namelist appropriately
echo "fff=0.02" >> user_nl_clm
echo "dint=0.86" >> user_nl_clm
echo "baseflow_scalar=0.0005" >> user_nl_clm

./case.submit