.pre-commit-config.yaml

# Copyright (C) 2023 Roberto Rossini <roberros@uio.no>
#
# SPDX-License-Identifier: MIT

default_language_version:
  python: python3 # Defaults to python2, so override it.

exclude: ^data
repos:
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.6.0
    hooks:
      - id: check-added-large-files
      - id: check-case-conflict
      - id: check-shebang-scripts-are-executable
      - id: check-symlinks
      - id: check-yaml
      - id: end-of-file-fixer
      - id: forbid-submodules
      - id: mixed-line-ending
        args:
          - --fix=lf
      - id: trailing-whitespace
  # Formatters should be run late so that they can re-format any prior changes.
  - repo: https://github.com/psf/black
    rev: 24.8.0
    hooks:
      - id: black
  - repo: https://github.com/pycqa/isort
    rev: 5.13.2
    hooks:
      - id: isort
  - repo: local
    hooks:
      - id: clang-format
        name: clang-format
        entry: clang-format
        types_or: [ c, c++ ]
        language: python
        args: [ '-i' ]
        additional_dependencies: [ 'clang-format==18.1.8' ]
      - id: styler
        name: styler
        entry: Rscript utils/devel/run_styler
        types_or: [ r ]
        language: r
        additional_dependencies: [ 'roxygen2', 'styler' ]