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DataFrame.apply() returns DataFrame unexpectedly when length of list stored in cell matches DF-dimensions #15788

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FlorianR opened this issue Mar 23, 2017 · 1 comment
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Reshaping Concat, Merge/Join, Stack/Unstack, Explode Usage Question

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@FlorianR
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Code Sample, a copy-pastable example if possible

import pandas as pd

# list length does NOT match DataFrame dimensions, works as expected:
df = pd.DataFrame()
df['A'] = [[1, 2], [1, 2], [1, 2]]
df['B'] = [[3, 4], [3, 4], [3, 4]]
df['C'] = [[4, 6], [4, 6], [4, 6]]
print(df)

#           A       B       C
#   0  [1, 2]  [3, 4]  [4, 6]
#   1  [1, 2]  [3, 4]  [4, 6]
#   2  [1, 2]  [3, 4]  [4, 6]

D = df.apply(lambda row: [a+b for a, b in zip(row.A, row.B)], axis=1)
print(D)

#   0    [4, 6]
#   1    [4, 6]
#   2    [4, 6]
#   dtype: object

df['D'] = D
print(df)

#           A       B       C       D
#   0  [1, 2]  [3, 4]  [4, 6]  [4, 6]
#   1  [1, 2]  [3, 4]  [4, 6]  [4, 6]
#   2  [1, 2]  [3, 4]  [4, 6]  [4, 6]

# list length DOES match DataFrame dimensions, does not work as expected:

df = pd.DataFrame()
df['A'] = [[1, 2, 3], [1, 2, 3], [1, 2, 3]]
df['B'] = [[3, 4, 5], [3, 4, 5], [3, 4, 5]]
df['C'] = [[4, 6, 8], [4, 6, 8], [4, 6, 8]]
print(df)

#              A          B          C
#   0  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]
#   1  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]
#   2  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]

# unwanted result:
D = df.apply(lambda row: [a+b for a, b in zip(row.A, row.B)], axis=1)
print(D)

#      A  B  C
#   0  4  6  8
#   1  4  6  8
#   2  4  6  8

# correct:
df['D'] = [[a+b for a, b in zip(row.A, row.B)] for row in df.itertuples()]

print(df)

#              A          B          C          D
#   0  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]  [4, 6, 8]
#   1  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]  [4, 6, 8]
#   2  [1, 2, 3]  [3, 4, 5]  [4, 6, 8]  [4, 6, 8]

Problem description

This behavior came up in a bigger project, when the length of a stored list incidentally met the DataFrame's dimension and resulted in an exception raised. I didn't expect apply() to return a DataFrame at all. I tried to find a parameter to change this behavior, but didn't have any luck there.

May be related to #5299

Expected Output

see above

Output of pd.show_versions()

INSTALLED VERSIONS ------------------ commit: None python: 3.6.0.final.0 python-bits: 64 OS: Linux OS-release: 4.9.11-1-ARCH machine: x86_64 processor: byteorder: little LC_ALL: None LANG: en_US.UTF-8 LOCALE: en_US.UTF-8

pandas: 0.19.2
nose: None
pip: 9.0.1
setuptools: 34.3.2
Cython: None
numpy: 1.12.1
scipy: 0.19.0
statsmodels: 0.8.0
xarray: None
IPython: 5.3.0
sphinx: 1.5.3
patsy: 0.4.1
dateutil: 2.6.0
pytz: 2016.10
blosc: None
bottleneck: None
tables: None
numexpr: None
matplotlib: 2.0.0
openpyxl: None
xlrd: None
xlwt: None
xlsxwriter: None
lxml: None
bs4: None
html5lib: 0.999999999
httplib2: None
apiclient: None
sqlalchemy: None
pymysql: None
psycopg2: 2.7.1 (dt dec pq3 ext lo64)
jinja2: 2.9.5
boto: None
pandas_datareader: None

@jreback
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jreback commented Mar 23, 2017

xref #14370 (and some linked issues).

you are on your own if you have lists inside a cell. This is not idiomatic (and certainly not performant in any way). If you really really want to do this, then return tuples.

@jreback jreback closed this as completed Mar 23, 2017
@jreback jreback added Reshaping Concat, Merge/Join, Stack/Unstack, Explode Usage Question labels Mar 23, 2017
@jreback jreback added this to the No action milestone Mar 23, 2017
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