failure on building ADIOS2

[tongshu83]

I failed to build ADIOS2 in bebop. Could you please help check the issue? Thank you very much!

The building procedure is as follows.
module unload intel-mkl/2017.3.196-v7uuj6z
module load intel/17.0.4-74uvhji
module load intel-mpi/2017.3-dfphq6k
module load libpsm2/10.3-17
module load cmake/3.12.2-4zllpyo
module load jdk/8u141-b15-mopj6qr
module load tcl/8.6.6-x4wnbsg
module load bzip2/1.0.6-hcvyuh5
module load zlib/1.2.11-6632jqd

export ROOT=$PWD/install
mkdir -pv $ROOT
rm -fv Anaconda3-2019.03-Linux-x86_64.sh
wget -q https://repo.anaconda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh
sh Anaconda3-2019.03-Linux-x86_64.sh -b -p $ROOT/anaconda3
export PATH=$ROOT/anaconda3/bin:$PATH
conda create -n codar python=3.7
export CONDA_HOME=$ROOT/anaconda3
export PATH=$CONDA_HOME/envs/codar/bin:$PATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CONDA_HOME/envs/codar/lib

git clone https://github.com/ornladios/ADIOS2.git
cd ADIOS2
mkdir build
cd build
cmake -DCMAKE_INSTALL_PREFIX=$ROOT/adios2 ..
make -j8

...
[ 68%] Building Fortran object testing/adios2/engine/staging-common/CMakeFiles/TestCommonRead_f.dir/TestCommonReadF.F90.o
/lcrc/project/PACC/tong/HPC_Autotuner/ADIOS2/testing/adios2/engine/staging-common/TestCommonReadF.F90:10.6:

use mpi
1
Fatal Error: File 'mpi.mod' opened at (1) is not a GNU Fortran module file
make[2]: *** [testing/adios2/engine/staging-common/CMakeFiles/TestCommonRead_f.dir/TestCommonReadF.F90.o] Error 1
make[1]: *** [testing/adios2/engine/staging-common/CMakeFiles/TestCommonRead_f.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 68%] Linking CXX executable ../../../../bin/TestInlineWriteRead
[ 68%] Built target TestInlineWriteRead
[ 68%] Linking CXX executable ../../../../bin/TestInSituMPIFunctionAssignPeers
[ 68%] Built target TestInSituMPIFunctionAssignPeers
[ 68%] Linking CXX executable ../../../../bin/TestEngineCommon
[ 68%] Built target TestEngineCommon
[ 68%] Linking CXX executable ../../../../bin/TestCommonWriteAttrs
[ 68%] Built target TestCommonWriteAttrs
[ 68%] Linking CXX executable ../../../../bin/TestStagingMPMD
[ 68%] Built target TestStagingMPMD
[ 68%] Linking CXX executable ../../../../bin/TestBPWriteReadLocalVariablesSel
[ 68%] Built target TestBPWriteReadLocalVariablesSel
[ 68%] Built target adios2py
make: *** [all] Error 2

[williamfgc]

@tongshu83 can you verify you are also using an Intel Fortran compiler compatible with Intel MPI. If you don't need the Fortran bindings in adios2 you can always configure with: -DADIOS2_USE_Fortran=OFF. Hope it helps.

[williamfgc]

@tongshu83 any updates on this?

[williamfgc]

@tongshu83 any updates on this?

[adamgranthendry]

@tonshu83 I'm having similar problems. Any updates? Please see #2838