Repositories list

• data_processing_pipelines

  Public
  A repository to store the existing pipelines to process the various CoLabs datasets

  Nextflow

  •1•1•38•8•Updated Jan 14, 2025Jan 14, 2025

• dscobal

  Public
  dscolab dscobal

  JavaScript

  •0•0•0•0•Updated Nov 23, 2024Nov 23, 2024

• essential_scripts

  Public
  Essential Scripts utilized by members and collaborators of DSCoLab

  R

  •0•0•0•3•Updated Nov 20, 2024Nov 20, 2024

• cyclone

  Public
  R

  •2•3•1•0•Updated Sep 17, 2024Sep 17, 2024

• COVID-dex

  Public
  Distinct pulmonary and systemic effects of dexamethasone in severe COVID-19

  R

  •1•1•0•0•Updated May 6, 2024May 6, 2024

• hackathon_primer

  Public
  HTML

  •0•0•0•0•Updated Aug 18, 2023Aug 18, 2023

• pan_cancer_immune_archetypes

  Public
  Python

  •

  MIT License

  •3•12•2•0•Updated Jul 20, 2023Jul 20, 2023

• aarao_scripts

  Public
  Essential Scripts used by Arjun Rao

  Python

  •0•2•3•0•Updated Dec 27, 2022Dec 27, 2022

• magnen_et_al_2022

  Public
  The software and auxiliary files associated with the Mangen et.al (2022)

  MIT License

  •0•0•0•0•Updated May 5, 2022May 5, 2022

• mujal_et_al_MonoMac_2021

  Public
  R

  •

  MIT License

  •1•0•0•0•Updated Dec 13, 2021Dec 13, 2021

• ipi_flow_population_name_standardization

  Public
  Script to extract standardized population names from Flow WSP files

  Python

  •0•0•0•0•Updated Aug 10, 2021Aug 10, 2021

• combes_et_al_COVID_2020

  Public
  A repository containing code and files required to reproduce data published in Combes et.al. (2020)

  R

  •2•2•1•0•Updated Jul 7, 2021Jul 7, 2021

• BMS-225A

  Public
  Materials for BMS 225A workshop on reproducible research and data exploration

  R

  •2•2•0•0•Updated Jan 5, 2021Jan 5, 2021