diff --git a/packages/indy-sdk-to-askar-migration/src/IndySdkToAskarMigrationUpdater.ts b/packages/indy-sdk-to-askar-migration/src/IndySdkToAskarMigrationUpdater.ts
index 73db32bdce..9460e479ee 100644
--- a/packages/indy-sdk-to-askar-migration/src/IndySdkToAskarMigrationUpdater.ts
+++ b/packages/indy-sdk-to-askar-migration/src/IndySdkToAskarMigrationUpdater.ts
@@ -30,32 +30,22 @@ export class IndySdkToAskarMigrationUpdater {
   private agent: Agent
   private dbPath: string
   private fs: FileSystem
-  private deleteOnFinish: boolean
 
-  private constructor(
-    walletConfig: WalletConfig,
-    agent: Agent,
-    dbPath: string,
-    deleteOnFinish = false,
-    defaultLinkSecretId?: string
-  ) {
+  private constructor(walletConfig: WalletConfig, agent: Agent, dbPath: string, defaultLinkSecretId?: string) {
     this.walletConfig = walletConfig
     this.dbPath = dbPath
     this.agent = agent
     this.fs = this.agent.dependencyManager.resolve<FileSystem>(InjectionSymbols.FileSystem)
     this.defaultLinkSecretId = defaultLinkSecretId ?? walletConfig.id
-    this.deleteOnFinish = deleteOnFinish
   }
 
   public static async initialize({
     dbPath,
     agent,
-    deleteOnFinish,
     defaultLinkSecretId,
   }: {
     dbPath: string
     agent: Agent
-    deleteOnFinish?: boolean
     defaultLinkSecretId?: string
   }) {
     const {
@@ -83,7 +73,7 @@ export class IndySdkToAskarMigrationUpdater {
       throw new IndySdkToAskarMigrationError("Wallet on the agent must be of instance 'AskarWallet'")
     }
 
-    return new IndySdkToAskarMigrationUpdater(walletConfig, agent, dbPath, deleteOnFinish, defaultLinkSecretId)
+    return new IndySdkToAskarMigrationUpdater(walletConfig, agent, dbPath, defaultLinkSecretId)
   }
 
   /**
@@ -186,14 +176,16 @@ export class IndySdkToAskarMigrationUpdater {
 
     // Copy the file from the database path to the new location
     await this.fs.copyFile(src, dest)
-
-    // Delete the original, only if specified by the user
-    if (this.deleteOnFinish) await this.fs.delete(this.dbPath)
   }
 
   /**
    * Function that updates the values from an indy-sdk structure to the new askar structure.
    *
+   * > NOTE: It is very important that this script is ran before the 0.3.x to
+   *         0.4.x migration script. This can easily be done by calling this when you
+   *         upgrade, before you initialize the agent with `autoUpdateStorageOnStartup:
+   *         true`.
+   *
    * - Assert that the paths that will be used are free
    * - Create a backup of the database
    * - Migrate the database to askar structure