Added fix for extracting index from dataArray #8
Workflow file for this run
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| name: Run tests, publish Python distribution to PyPI and TestPyPI | |
| on: | |
| push: | |
| branches: ["main", "devel"] | |
| pull_request: | |
| branches: ["main", "devel"] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pytest | |
| python -m pip install -r requirements.txt | |
| - name: Test with pytest | |
| run: | | |
| pytest | |
| # Code below modified from | |
| # https://packaging.python.org/en/latest/guides/publishing-package-distribution-releases-using-github-actions-ci-cd-workflows/ | |
| build: | |
| name: Build distribution 📦 | |
| runs-on: ubuntu-latest | |
| needs: | |
| - test | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| cache: "pip" | |
| - name: Install pypa/build | |
| run: >- | |
| python3 -m | |
| pip install | |
| build | |
| --user | |
| - name: Build a binary wheel and a source tarball | |
| run: python3 -m build | |
| - name: Store the distribution packages | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| # If we've pushed to main we'll to a test release to TestPyPI | |
| publish-to-testpypi: | |
| name: Publish Python 🐍 distribution 📦 to TestPyPI | |
| needs: | |
| - build | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: testpypi | |
| url: https://test.pypi.org/p/openghg_calscales | |
| permissions: | |
| id-token: write | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Publish distribution 📦 to TestPyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| repository-url: https://test.pypi.org/legacy/ | |
| publish-to-pypi: | |
| name: >- | |
| Publish Python 🐍 distribution 📦 to PyPI | |
| if: startsWith(github.ref, 'refs/tags/') # only publish to PyPI on tag pushes | |
| needs: | |
| - build | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: pypi | |
| url: https://pypi.org/p/openghg_calscales | |
| permissions: | |
| id-token: write | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Publish distribution 📦 to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| release_conda: | |
| name: Build and publish conda package | |
| runs-on: ubuntu-latest | |
| if: startsWith(github.ref, 'refs/tags/') # only publish on tag pushes | |
| needs: | |
| - test | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@db1df3ba9e07ea86f759e98b575c002747e9e757 | |
| with: | |
| init-shell: bash | |
| - name: Build and push the conda package | |
| run: | | |
| micromamba create -n openghg_build anaconda-client boa -c conda-forge | |
| micromamba activate openghg_build | |
| conda config --append channels openghg | |
| mkdir ${{ github.workspace }}/build | |
| conda mambabuild --croot ${{ github.workspace }}/build recipes -c conda-forge | |
| BUILD_DIR=${GITHUB_WORKSPACE}/build | |
| BUILD=$(find "$BUILD_DIR" -name '*.tar.bz2') | |
| anaconda --token "$ANACONDA_TOKEN" upload --user openghg --label main "$BUILD" | |
| env: | |
| ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }} | |
| github-release: | |
| name: >- | |
| Sign the Python 🐍 distribution 📦 with Sigstore | |
| and upload them to GitHub Release | |
| needs: | |
| - publish-to-pypi | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write # IMPORTANT: mandatory for making GitHub Releases | |
| id-token: write # IMPORTANT: mandatory for sigstore | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Sign the dists with Sigstore | |
| uses: sigstore/[email protected] | |
| with: | |
| inputs: >- | |
| ./dist/*.tar.gz | |
| ./dist/*.whl | |
| - name: Create GitHub Release | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: >- | |
| gh release create | |
| '${{ github.ref_name }}' | |
| --repo '${{ github.repository }}' | |
| --notes "" | |
| - name: Upload artifact signatures to GitHub Release | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| # Upload to GitHub Release using the `gh` CLI. | |
| # `dist/` contains the built packages, and the | |
| # sigstore-produced signatures and certificates. | |
| run: >- | |
| gh release upload | |
| '${{ github.ref_name }}' dist/** | |
| --repo '${{ github.repository }}' |