env.yml bugfix #420
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Python package | |
| on: | |
| push: | |
| pull_request: | |
| types: [opened, reopened] | |
| jobs: | |
| pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11", "3.12"] | |
| torch-version: [2.3.0, 2.4.0] | |
| include: | |
| - torch-version: 2.3.0 | |
| torchvision-version: 0.18.0 | |
| - torch-version: 2.4.0 | |
| torchvision-version: 0.19.0 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install PyTorch ${{ matrix.torch-version }}+cpu | |
| run: | | |
| pip install torch==${{ matrix.torch-version}} torchvision==${{ matrix.torchvision-version}} --index-url https://download.pytorch.org/whl/cpu | |
| - name: Install internal dependencies | |
| run: | | |
| pip install pyg_lib torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-${{ matrix.torch-version}}+cpu.html | |
| if [ ${{ matrix.torch-version}} == 2.3.0 ]; then pip install dgl -f https://data.dgl.ai/wheels/torch-2.3/repo.html; fi | |
| - name: Install main package | |
| run: | | |
| pip install -e . | |
| pip install pytest-xdist | |
| - name: Setup with pytest-xdist | |
| run: | | |
| # lets get the string for how many cpus to use with pytest | |
| echo "Will be using ${{ inputs.pytest_numcpus }} cpus for pytest testing" | |
| # | |
| # make PYTESTXDIST | |
| export PYTESTXDIST="-n 2" | |
| if [ 2 -gt 0 ]; then export PYTESTXDIST="$PYTESTXDIST --dist=loadfile"; fi | |
| # | |
| # echo results and save env var for other jobs | |
| echo "pytest-xdist options that will be used are: $PYTESTXDIST" | |
| echo "PYTESTXDIST=$PYTESTXDIST" >> $GITHUB_ENV | |
| - name: Setup with pytest-cov | |
| run: | | |
| # let make pytest run with coverage | |
| echo "Will be looking at coverage of dir graph_weather" | |
| # | |
| # install pytest-cov | |
| pip install coverage==7.4.3 | |
| pip install pytest-cov | |
| # | |
| # make PYTESTCOV | |
| export PYTESTCOV="--cov=graph_weather tests/ --cov-report=xml" | |
| # echo results and save env var for other jobs | |
| echo "pytest-cov options that will be used are: $PYTESTCOV" | |
| echo "PYTESTCOV=$PYTESTCOV" >> $GITHUB_ENV | |
| - name: Run pytest | |
| run: | | |
| # import dgl to initialize backend | |
| if [ ${{ matrix.torch-version}} == 2.3.0 ]; then python3 -c "import dgl"; fi | |
| export PYTEST_COMMAND="pytest $PYTESTCOV $PYTESTXDIST -s" | |
| echo "Will be running this command: $PYTEST_COMMAND" | |
| eval $PYTEST_COMMAND | |
| - name: "Upload coverage to Codecov" | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| fail_ci_if_error: false |