.gitignore

venv/*
.eggs/*
biocrnpyler.egg-info/

__pycache__/*
*.pyc

.coverage
.coverage.*
coverage.xml
.ipynb_checkpoints
examples/.ipynb_checkpoints/
*.orig
*.py.orig

build/
dist/
htmlcov/

Tests/bioscrape_test.sbml
Tests/dcas9_repression_test.sbml
Tests/bioscrape_test.xml
Tests/dcas9_repression_test.xml
Tests/sbml_test_file.xml


# Sphinx documentation
docs/build/

# Covers JetBrains PyCharm
# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839
# User-specific stuff
.idea/**/tasks.xml
.idea/**/usage.statistics.xml
.idea/**/dictionaries
.idea/**/shelf

# our ignores
.idea/BioCRNPyler.iml
.idea/misc.xml
.idea/modules.xml
.idea/vcs.xml
.idea/workspace.xml

# Generated files
.idea/**/contentModel.xml

# Sensitive or high-churn files
.idea/**/dataSources/
.idea/**/dataSources.ids
.idea/**/dataSources.local.xml
.idea/**/sqlDataSources.xml
.idea/**/dynamic.xml
.idea/**/uiDesigner.xml
.idea/**/dbnavigator.xml

# Gradle
.idea/**/gradle.xml
.idea/**/libraries

### VisualStudioCode ###
.vscode/*
!.vscode/settings.json
!.vscode/tasks.json
!.vscode/launch.json
!.vscode/extensions.json

### VisualStudioCode Patch ###
# Ignore all local history of files
**/.history
.vscode/settings.json

### BioCRNPlyer
# Ignore xml files generated by this toolbox
*.xml