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ExonBED
Eaton edited this page Jan 15, 2019
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Below is the column format used in the exon-level BED file recognized by AltAnalyze. When a .bed file containing these 10 fields is imported, AltAnalyze will assume the data are detected exons from your experiment. This can be RNA-seq or even an unsupported microarray. Default expression is non-log read counts but can be log2 (select format as log in AltAnalyze). The notes field can include any or no information.
chr | start | stop | notes | null | strand | expression | null | region-size | null |
---|---|---|---|---|---|---|---|---|---|
chr15 | 76527163 | 76527449 | ENSMUSE00000393034 | 0 | + | 22 | 0 | 286 | 0 |