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[Feature] Add (bare-bones) validation/QC-package for OMERO #3

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omaus opened this issue Dec 21, 2023 · 4 comments
Open

[Feature] Add (bare-bones) validation/QC-package for OMERO #3

omaus opened this issue Dec 21, 2023 · 4 comments
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@omaus
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omaus commented Dec 21, 2023

The validation of OMERO-targeted ARCs might be more difficult due to OMERO's more complex requirements (compared to, say, Invenio or PRIDE) though we need to have some basic validation cases working.

@kMutagene
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linking this poc python script from the biohackathon bielefeld that should offer a good start on how to map some properties: https://github.com/NFDI4BIOIMAGE/BHG2023-OMERO-ARC/blob/main/Task_Groups/06_ARC-2-OMERO/metadata_filler.py

@kMutagene
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kMutagene commented Dec 22, 2023

also note that i think these issues (for validation packages) might be better suited for https://github.com/nfdi4plants/arc-validate-packages

@omaus
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omaus commented Dec 22, 2023

Correct, transfer them. @kMutagene

@kMutagene
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your wish is my command

@kMutagene kMutagene transferred this issue from nfdi4plants/arc-validate Dec 26, 2023
@kMutagene kMutagene moved this to Backlog in ARCStack Jun 5, 2024
@kMutagene kMutagene added this to the DataHUB public release milestone Jun 6, 2024
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