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Allow fastqscreen inputs to just be a fasta #76

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edmundmiller opened this issue Feb 24, 2025 · 0 comments
Open

Allow fastqscreen inputs to just be a fasta #76

edmundmiller opened this issue Feb 24, 2025 · 0 comments
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enhancement New feature or request

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@edmundmiller
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Description of feature

Kinda similar to #21.

I wish I could do:

name,dir,basename,aligner
Ecoli,s3://ngi-igenomes/igenomes/Escherichia_coli_K_12_MG1655/NCBI/2001-10-15/Sequence/genome.fa,genome,bowtie2

And the workflow would build the reference for me on the fly as well.
@edmundmiller edmundmiller added the enhancement New feature or request label Feb 24, 2025
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@edmundmiller