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Add vCHORD to oncoanalyser for HRD detection in targeted mode #118

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bounlu opened this issue Dec 6, 2024 · 1 comment
Open

Add vCHORD to oncoanalyser for HRD detection in targeted mode #118

bounlu opened this issue Dec 6, 2024 · 1 comment
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enhancement New feature or request

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@bounlu
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bounlu commented Dec 6, 2024 •
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In the targeted mode, CHORD is disabled and vCHORD is used instead for HRD detection for a panel of samples. However, it's not implemented in nf-core/oncoanalyser yet. It will be great to have it here too. Thanks.
@bounlu bounlu added the enhancement New feature or request label Dec 6, 2024
@scwatts
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scwatts commented Dec 6, 2024

Agreed, this will be implemented in oncoanalyser in due course! I'll leave the issue open until that piece of work is complete

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@scwatts @bounlu