From affd98d79ca3d01dd92fd2b2e479293d0eae1dee Mon Sep 17 00:00:00 2001 From: Gisela Gabernet Date: Fri, 31 May 2024 20:15:53 -0400 Subject: [PATCH] allow skip multiqc --- workflows/airrflow.nf | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/workflows/airrflow.nf b/workflows/airrflow.nf index e9165cf7..4d228544 100644 --- a/workflows/airrflow.nf +++ b/workflows/airrflow.nf @@ -284,9 +284,11 @@ workflow AIRRFLOW { ch_report_logo.toList() ) multiqc_report = MULTIQC.out.report.toList() + } else { + multiqc_report = Channel.empty() } emit: - multiqc_report = MULTIQC.out.report.toList() // channel: /path/to/multiqc_report.html + multiqc_report = multiqc_report // channel: /path/to/multiqc_report.html versions = ch_versions // channel: [ path(versions.yml) ] }