From f68c69550d3320e881bdf4f1c0c0a150c8bab2ca Mon Sep 17 00:00:00 2001
From: Victor Lin <13424970+victorlin@users.noreply.github.com>
Date: Fri, 5 Apr 2024 16:03:07 -0700
Subject: [PATCH] Use branch with augur subsample

---
 Dockerfile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Dockerfile b/Dockerfile
index eb5a037..e739a72 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -338,7 +338,7 @@ RUN pip3 install phylo-treetime
 # with --volume=.../augur:/nextstrain/augur and still have it globally
 # accessible and importable.
 WORKDIR /nextstrain/augur
-RUN /builder-scripts/download-repo https://github.com/nextstrain/augur "$(/builder-scripts/latest-augur-release-tag)" . \
+RUN /builder-scripts/download-repo https://github.com/nextstrain/augur victorlin/subsample-2 . \
  && pip3 install --editable .
 
 # Add evofr for forecasting