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The option docker.userEmulation has been removed with #4596, but in nf-core we found some situations where we used this option to fix permission errors.
Hello!
The option
docker.userEmulation
has been removed with #4596, but in nf-core we found some situations where we used this option to fix permission errors.For example, in modules where inside containers the user is
biodocker
. This causes an error where.command.trace
can't be created. See https://github.com/nf-core/modules/blob/master/tests/modules/nf-core/ncbitools/vecscreen/nextflow.config#L11-L16Is there a different solution for these situations?
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