diff --git a/Gemfile b/Gemfile index 6976111..20e4d61 100644 --- a/Gemfile +++ b/Gemfile @@ -8,10 +8,10 @@ gem 'rake', '~> 10.0' gem 'redis' # NCBO -gem 'goo', github: 'ncbo/goo', branch: 'master' -gem 'ncbo_annotator', github: 'ncbo/ncbo_annotator', branch: 'master' -gem 'ontologies_linked_data', github: 'ncbo/ontologies_linked_data', branch: 'master' -gem 'sparql-client', github: 'ncbo/sparql-client', branch: 'master' +gem 'goo', github: 'ncbo/goo', branch: 'develop' +gem 'ncbo_annotator', github: 'ncbo/ncbo_annotator', branch: 'develop' +gem 'ontologies_linked_data', github: 'ncbo/ontologies_linked_data', branch: 'develop' +gem 'sparql-client', github: 'ncbo/sparql-client', branch: 'develop' group :development do gem 'simplecov' diff --git a/Gemfile.lock b/Gemfile.lock index 50ba6b9..3bf9e9f 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,7 +1,7 @@ GIT remote: https://github.com/ncbo/goo.git - revision: f943ac33e87c55c88131c32d826ed5d39c89302c - branch: master + revision: 35721855ba808517698d8b94eb38d4553001c4b6 + branch: develop specs: goo (0.0.2) addressable (~> 2.8) @@ -16,8 +16,8 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: 63c986880aa88c9384043e6611a682434a14aba7 - branch: master + revision: 11838eb3d3c66bfcbc0fcbd2081e776da121fb8c + branch: develop specs: ncbo_annotator (0.0.1) goo @@ -27,8 +27,8 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: 9ab4be437ed84f5a480e7f0d8799824fcea310ae - branch: master + revision: 6389fa2052e06ff8e21c64fd1be0030beca4c828 + branch: develop specs: ontologies_linked_data (0.0.1) activesupport @@ -47,8 +47,8 @@ GIT GIT remote: https://github.com/ncbo/sparql-client.git - revision: e89c26aa96f184dbe9b52d51e04fb3d9ba998dbc - branch: master + revision: 1657f0dd69fd4b522d3549a6848670175f5e98cc + branch: develop specs: sparql-client (1.0.1) json_pure (>= 1.4) @@ -73,23 +73,23 @@ GEM concurrent-ruby (1.3.4) connection_pool (2.4.1) cube-ruby (0.0.3) - date (3.3.4) + date (3.4.0) docile (1.4.1) domain_name (0.6.20240107) - faraday (2.12.0) - faraday-net_http (>= 2.0, < 3.4) + faraday (2.12.1) + faraday-net_http (>= 2.0, < 3.5) json logger - faraday-net_http (3.3.0) - net-http + faraday-net_http (3.4.0) + net-http (>= 0.5.0) ffi (1.17.0-aarch64-linux-gnu) http-accept (1.7.0) http-cookie (1.0.7) domain_name (~> 0.5) i18n (0.9.5) concurrent-ruby (~> 1.0) - json (2.7.2) - json_pure (2.7.2) + json (2.8.2) + json_pure (2.8.1) libxml-ruby (5.0.3) logger (1.6.1) macaddr (1.7.2) @@ -103,14 +103,14 @@ GEM mime-types (3.6.0) logger mime-types-data (~> 3.2015) - mime-types-data (3.2024.1001) + mime-types-data (3.2024.1105) mini_mime (1.1.5) minitest (4.7.5) multi_json (1.15.0) - net-http (0.4.1) + net-http (0.5.0) uri net-http-persistent (2.9.4) - net-imap (0.4.16) + net-imap (0.4.18) date net-protocol net-pop (0.1.2) @@ -120,19 +120,19 @@ GEM net-smtp (0.5.0) net-protocol netrc (0.11.0) - oj (3.16.6) + oj (3.16.7) bigdecimal (>= 3.0) ostruct (>= 0.2) omni_logger (0.1.4) logger - ostruct (0.6.0) + ostruct (0.6.1) pony (1.13.1) mail (>= 2.0) - pry (0.14.2) + pry (0.15.0) coderay (~> 1.1) method_source (~> 1.0) public_suffix (6.0.1) - rack (3.1.7) + rack (3.1.8) rack-test (2.1.0) rack (>= 1.3) rake (10.5.0) @@ -149,7 +149,7 @@ GEM http-cookie (>= 1.0.2, < 2.0) mime-types (>= 1.16, < 4.0) netrc (~> 0.8) - rexml (3.3.8) + rexml (3.3.9) rsolr (2.6.0) builder (>= 2.1.2) faraday (>= 0.9, < 3, != 2.0.0) @@ -166,9 +166,9 @@ GEM simplecov_json_formatter (0.1.4) systemu (2.6.5) thread_safe (0.3.6) - timeout (0.4.1) + timeout (0.4.2) tzinfo (0.3.62) - uri (0.13.1) + uri (1.0.2) uuid (2.3.9) macaddr (~> 1.0) diff --git a/test/evaluators/test_specialization_evaluator.rb b/test/evaluators/test_specialization_evaluator.rb index a6e337d..f024cbe 100644 --- a/test/evaluators/test_specialization_evaluator.rb +++ b/test/evaluators/test_specialization_evaluator.rb @@ -35,8 +35,8 @@ def test_evaluate def test_get_number_of_classes assert_equal(810, @@specialization_evaluator.send(:get_number_of_classes, 'MCCLTEST-0')) - assert_equal(486, @@specialization_evaluator.send(:get_number_of_classes, 'BROTEST-0')) + assert_equal(487, @@specialization_evaluator.send(:get_number_of_classes, 'BROTEST-0')) assert_equal(436, @@specialization_evaluator.send(:get_number_of_classes, 'ONTOMATEST-0')) end -end \ No newline at end of file +end