From 0e3dc8d19a98bd4afc5ce8dc2458faa1058563af Mon Sep 17 00:00:00 2001
From: Alex Skrenchuk <alexskr@stanford.edu>
Date: Tue, 26 Nov 2024 18:24:07 -0800
Subject: [PATCH] update number of classes to accommodate changes in bro
 ontology

---
 Gemfile.lock                                  | 40 +++++++++----------
 .../test_specialization_evaluator.rb          |  4 +-
 2 files changed, 22 insertions(+), 22 deletions(-)

diff --git a/Gemfile.lock b/Gemfile.lock
index ea5f1ff..781f8a4 100644
--- a/Gemfile.lock
+++ b/Gemfile.lock
@@ -1,6 +1,6 @@
 GIT
   remote: https://github.com/ncbo/goo.git
-  revision: 74a012eebb9433d031eb00df5abbe488cb8b4512
+  revision: 35721855ba808517698d8b94eb38d4553001c4b6
   branch: develop
   specs:
     goo (0.0.2)
@@ -16,7 +16,7 @@ GIT
 
 GIT
   remote: https://github.com/ncbo/ncbo_annotator.git
-  revision: b2731c98bfef0958fecb440c8648b7755a670895
+  revision: 2abcd54c148d0983570d681506002d9d3782d2eb
   branch: develop
   specs:
     ncbo_annotator (0.0.1)
@@ -27,7 +27,7 @@ GIT
 
 GIT
   remote: https://github.com/ncbo/ontologies_linked_data.git
-  revision: 812dd78f02b77c9c6d579b0febf1c2a42d513022
+  revision: 6389fa2052e06ff8e21c64fd1be0030beca4c828
   branch: develop
   specs:
     ontologies_linked_data (0.0.1)
@@ -73,23 +73,23 @@ GEM
     concurrent-ruby (1.3.4)
     connection_pool (2.4.1)
     cube-ruby (0.0.3)
-    date (3.3.4)
+    date (3.4.0)
     docile (1.4.1)
     domain_name (0.6.20240107)
-    faraday (2.12.0)
-      faraday-net_http (>= 2.0, < 3.4)
+    faraday (2.12.1)
+      faraday-net_http (>= 2.0, < 3.5)
       json
       logger
-    faraday-net_http (3.3.0)
-      net-http
+    faraday-net_http (3.4.0)
+      net-http (>= 0.5.0)
     ffi (1.17.0-aarch64-linux-gnu)
     http-accept (1.7.0)
     http-cookie (1.0.7)
       domain_name (~> 0.5)
     i18n (0.9.5)
       concurrent-ruby (~> 1.0)
-    json (2.7.2)
-    json_pure (2.7.2)
+    json (2.8.2)
+    json_pure (2.8.1)
     libxml-ruby (5.0.3)
     logger (1.6.1)
     macaddr (1.7.2)
@@ -103,14 +103,14 @@ GEM
     mime-types (3.6.0)
       logger
       mime-types-data (~> 3.2015)
-    mime-types-data (3.2024.1001)
+    mime-types-data (3.2024.1105)
     mini_mime (1.1.5)
     minitest (4.7.5)
     multi_json (1.15.0)
-    net-http (0.4.1)
+    net-http (0.5.0)
       uri
     net-http-persistent (2.9.4)
-    net-imap (0.4.16)
+    net-imap (0.4.18)
       date
       net-protocol
     net-pop (0.1.2)
@@ -120,19 +120,19 @@ GEM
     net-smtp (0.5.0)
       net-protocol
     netrc (0.11.0)
-    oj (3.16.6)
+    oj (3.16.7)
       bigdecimal (>= 3.0)
       ostruct (>= 0.2)
     omni_logger (0.1.4)
       logger
-    ostruct (0.6.0)
+    ostruct (0.6.1)
     pony (1.13.1)
       mail (>= 2.0)
-    pry (0.14.2)
+    pry (0.15.0)
       coderay (~> 1.1)
       method_source (~> 1.0)
     public_suffix (6.0.1)
-    rack (3.1.7)
+    rack (3.1.8)
     rack-test (2.1.0)
       rack (>= 1.3)
     rake (10.5.0)
@@ -149,7 +149,7 @@ GEM
       http-cookie (>= 1.0.2, < 2.0)
       mime-types (>= 1.16, < 4.0)
       netrc (~> 0.8)
-    rexml (3.3.8)
+    rexml (3.3.9)
     rsolr (2.6.0)
       builder (>= 2.1.2)
       faraday (>= 0.9, < 3, != 2.0.0)
@@ -166,9 +166,9 @@ GEM
     simplecov_json_formatter (0.1.4)
     systemu (2.6.5)
     thread_safe (0.3.6)
-    timeout (0.4.1)
+    timeout (0.4.2)
     tzinfo (0.3.62)
-    uri (0.13.1)
+    uri (1.0.2)
     uuid (2.3.9)
       macaddr (~> 1.0)
 
diff --git a/test/evaluators/test_specialization_evaluator.rb b/test/evaluators/test_specialization_evaluator.rb
index a6e337d..f024cbe 100644
--- a/test/evaluators/test_specialization_evaluator.rb
+++ b/test/evaluators/test_specialization_evaluator.rb
@@ -35,8 +35,8 @@ def test_evaluate
 
   def test_get_number_of_classes
     assert_equal(810, @@specialization_evaluator.send(:get_number_of_classes, 'MCCLTEST-0'))
-    assert_equal(486, @@specialization_evaluator.send(:get_number_of_classes, 'BROTEST-0'))
+    assert_equal(487, @@specialization_evaluator.send(:get_number_of_classes, 'BROTEST-0'))
     assert_equal(436, @@specialization_evaluator.send(:get_number_of_classes, 'ONTOMATEST-0'))
   end
 
-end
\ No newline at end of file
+end