From 6ea382c35836cd6ff7cbab29be5ba9dc4ef03624 Mon Sep 17 00:00:00 2001
From: caufieldjh <j.harry.caufield@gmail.com>
Date: Thu, 5 Sep 2024 15:51:37 -0400
Subject: [PATCH] Bugfixes for Jenkins

---
 Jenkinsfile | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/Jenkinsfile b/Jenkinsfile
index 31ac1c2..28345d1 100644
--- a/Jenkinsfile
+++ b/Jenkinsfile
@@ -75,7 +75,8 @@ pipeline {
                     script {
                         // Get the names of all BioPortal ontologies
                         // This saves the list to data/raw/ontologylist.tsv
-                        sh ". venv/bin/activate && kgbioportal get-ontology-list --api_key ${NCBO_API_KEY}"
+                        // Deactivated for testing purposes
+                        //sh ". venv/bin/activate && kgbioportal get-ontology-list --api_key ${NCBO_API_KEY}"
 
                         // Now download all
                         // or at least in the future, do them all.