diff --git a/Jenkinsfile b/Jenkinsfile index ae9e4fa..47735cc 100644 --- a/Jenkinsfile +++ b/Jenkinsfile @@ -74,7 +74,7 @@ pipeline { dir('./gitrepo') { script { // Get the names of all BioPortal ontologies - sh ". venv/bin/activate && kgbioportal get-ontology-list --api_key ${NCBO_API_KEY} --output data/raw/" + sh ". venv/bin/activate && kgbioportal get-ontology-list --api_key ${NCBO_API_KEY} --output_dir data/raw/" // Now download all // or at least in the future, do them all.