From c3e45bbc8e6f8b0709082b602612cc13c43ca9b3 Mon Sep 17 00:00:00 2001 From: Juan Nunez-Iglesias Date: Wed, 26 Jun 2024 22:51:02 +1000 Subject: [PATCH] Draft release notes for 0.5.0 (#430) --- docs/_toc.yml | 1 + docs/release/release_0_5_0.md | 916 ++++++++++++++++++++++++++++++++++ 2 files changed, 917 insertions(+) create mode 100644 docs/release/release_0_5_0.md diff --git a/docs/_toc.yml b/docs/_toc.yml index e0f866866..ae9a58768 100644 --- a/docs/_toc.yml +++ b/docs/_toc.yml @@ -180,6 +180,7 @@ subtrees: - file: release/index subtrees: - entries: + - file: release/release_0_5_0 - file: release/release_0_4_19 - file: release/release_0_4_18 - file: release/release_0_4_17 diff --git a/docs/release/release_0_5_0.md b/docs/release/release_0_5_0.md new file mode 100644 index 000000000..45fcdd64a --- /dev/null +++ b/docs/release/release_0_5_0.md @@ -0,0 +1,916 @@ +# napari 0.5.0 + +*Note: these release notes are still in draft while 0.5.0 is in alpha/release +candidate testing.* + +We're happy to announce the release of napari 0.5.0! +napari is a fast, interactive, multi-dimensional image viewer for Python. +It's designed for exploring, annotating, and analyzing multi-dimensional +images. It's built on top of Qt (for the GUI), VisPy (for performant GPU-based +rendering), and the scientific Python stack (NumPy, SciPy, and friends). + + +For more information, examples, and documentation, please visit our website: +https://napari.org/ + +## Highlights + +napari 0.5.0 is the beginning of an architectural overhaul of napari. The +architecture improvements, which are still ongoing, enable more responsive +asynchronous loading when slicing layers or panning and zooming in multiscale +2D layers ([#5816](https://github.com/napari/napari/pull/5816)). + +Other architectural changes, refactoring napari on top of +[app-model](https://app-model.readthedocs.io/en/latest/), have enabled us to +(finally 😅) implement [NAP-6](nap-6-contributable-menus), which allows +plugins to organize their commands in defined menus in the napari menubar +and application. Please read [NAP-6](nap-6-contributable-menus) for all the +juicy details, including how to request more menus if the existing ones don't +meet your needs. 📋 ([#7011](https://github.com/napari/napari/pull/7011)) + +Another important development for plugins is that we have added fields for +axis names and physical units in layers +([#6979](https://github.com/napari/napari/pull/6979)). If you implement a +reader plugin, you can now specify the names of the axes in the data that you +are reading in, and the physical units of the scale and other transformations. +Currently, napari is *not* using this information, but we will in upcoming +versions, so plugins should start providing this information if they have it. + +There's plenty of new features, too, including a polygon drawing tool when +painting labels ([#5806](https://github.com/napari/napari/pull/5806)), +pinch-to-zoom ([#5859](https://github.com/napari/napari/pull/5859)), better +ways to show/hide individual layers when exploring your data +([#5574](https://github.com/napari/napari/pull/5574)) +([#5618](https://github.com/napari/napari/pull/5618)), creating a layer from +an image or URL in your clipboard +([#6532](https://github.com/napari/napari/pull/6532)), copy/pasting spatial +metadata (scale, translate, etc) between layers +([#6864](https://github.com/napari/napari/pull/6864)) and more: +Over 20 new features in all and over 100 bug fixes and improvements! + +Please see below for the full list of changes since 0.4.19. + +## New Features + +- Add layer slicer base class for async slicing ([#5170](https://github.com/napari/napari/pull/5170)) +- Feature: add layer contextual menu to hide not-selected layers ([#5574](https://github.com/napari/napari/pull/5574)) +- Feature: alt-click visibility eye to toggle show just that layer (hide others) ([#5618](https://github.com/napari/napari/pull/5618)) +- Feature: Add action to set current label to background (with keybinding) ([#5672](https://github.com/napari/napari/pull/5672)) +- Use Dims margin in layer slicing code ([#5697](https://github.com/napari/napari/pull/5697)) +- Changing brush size with mouse movement while holding specified modifiers ([#5753](https://github.com/napari/napari/pull/5753)) +- Feature: polygon drawing in the Labels layer ([#5806](https://github.com/napari/napari/pull/5806)) +- Replace old async loading with new approach ([#5816](https://github.com/napari/napari/pull/5816)) +- Enable pinch-to-zoom with vispy 0.13+ ([#5859](https://github.com/napari/napari/pull/5859)) +- Keep shading light for Surface fixed relative to camera ([#5893](https://github.com/napari/napari/pull/5893)) +- Use Request/Response pattern for Vectors layer ([#5918](https://github.com/napari/napari/pull/5918)) +- Lock dimensions / axes while rolling ([#5986](https://github.com/napari/napari/pull/5986)) +- Added support for features in surface layers ([#6515](https://github.com/napari/napari/pull/6515)) +- Add creating image from clipboard ([#6532](https://github.com/napari/napari/pull/6532)) +- Add viewer keybinds to select & show only next/prev layer and to toggle visibility of unselected ([#6590](https://github.com/napari/napari/pull/6590)) +- Show `About napari` action on macOS application menu ([#6666](https://github.com/napari/napari/pull/6666)) +- Add points/shapes highlight color setting to Appereance settings and preference page ([#6689](https://github.com/napari/napari/pull/6689)) +- Include features index as key in FormatStringEncoding ([#6703](https://github.com/napari/napari/pull/6703)) +- Reset all dims to be rollable ([#6797](https://github.com/napari/napari/pull/6797)) +- implement copying spatial information via clipboard ([#6864](https://github.com/napari/napari/pull/6864)) +- Add `axis_labels` and `units` to layers and transforms ([#6979](https://github.com/napari/napari/pull/6979)) +- Alpha implementation of NAP-6 ([#7011](https://github.com/napari/napari/pull/7011)) +- Better export of figure-quality renderings from the canvas ([#6730](https://github.com/napari/napari/pull/6730)) + +## Improvements + +- use app-model for file menu ([#4865](https://github.com/napari/napari/pull/4865)) +- Show platform specific shortcut while editing. ([#5064](https://github.com/napari/napari/pull/5064)) +- Add secondary keybindings to restore mnemonic (non-numeric) shortcuts in layers ([#5155](https://github.com/napari/napari/pull/5155)) +- Add loading layer UI indicator ([#5342](https://github.com/napari/napari/pull/5342)) +- Clean up layer slicer before integration with viewer ([#5435](https://github.com/napari/napari/pull/5435)) +- Thick Slices (Dims as nD-box instead of nD-point) ([#5522](https://github.com/napari/napari/pull/5522)) +- Add `font-size` to theme ([#5607](https://github.com/napari/napari/pull/5607)) +- Feature: Background color swapping for the Label layer (extends #5672) ([#5744](https://github.com/napari/napari/pull/5744)) +- Improve error message when user passes nonexistent plugin ([#6016](https://github.com/napari/napari/pull/6016)) +- Reduce comparison in evented model ([#6075](https://github.com/napari/napari/pull/6075)) +- Expose theme `font_size` as an `Appearance` setting ([#6113](https://github.com/napari/napari/pull/6113)) +- ENH Adds `LayerList` context ([#6165](https://github.com/napari/napari/pull/6165)) +- Add layer name to QFileDialog when only one layer is selected for saving. ([#6360](https://github.com/napari/napari/pull/6360)) +- Use blobs instead of random integers ([#6527](https://github.com/napari/napari/pull/6527)) +- Show notification when using shortcut to change current selected label to largest used label plus one ([#6546](https://github.com/napari/napari/pull/6546)) +- Keep vertex selection after shape drawing finishes ([#6640](https://github.com/napari/napari/pull/6640)) +- Add GL_MAX_3D_TEXTURE_SIZE to `napari --info` ([#6645](https://github.com/napari/napari/pull/6645)) +- [ENH] use imageio.v3 for builtins io imread ([#6677](https://github.com/napari/napari/pull/6677)) +- Make new labels dtype configurable ([#6695](https://github.com/napari/napari/pull/6695)) +- Add `Optional` section to napari info with numba and triangle ([#6710](https://github.com/napari/napari/pull/6710)) +- [ENH] Add `repeatable` kwarg to register_viewer_action and use it for slider left/right keybind ([#6769](https://github.com/napari/napari/pull/6769)) +- "Shapes to Labels", "(float)Image to Labels": Don't pop layer being converted, append new one ([#6859](https://github.com/napari/napari/pull/6859)) +- [enh] Transform mode: shift to snap layer rotation to 45 deg ([#6948](https://github.com/napari/napari/pull/6948)) +- [UX/UI] flip the default for the reader plugin dialog to *not* have the Remember box checked ([#7016](https://github.com/napari/napari/pull/7016)) +- Extend "No Qt bindings found" error message with details about conda ([#6095](https://github.com/napari/napari/pull/6095)) +- Add convenience input validation for Labels colormaps ([#7025](https://github.com/napari/napari/pull/7025)) +- [UI/UX] Updated polygon button icon for Shapes & Labels regular polygon tool ([#7019](https://github.com/napari/napari/pull/7019)) + +## Performance + +- Do not copy label data when not necessary ([#5542](https://github.com/napari/napari/pull/5542)) +- Throttle mouse move event to fix high-polling-rate input ([#5710](https://github.com/napari/napari/pull/5710)) +- Speed up symbols validation in points layers ([#6277](https://github.com/napari/napari/pull/6277)) +- Making Tracks layers creation and update faster ([#6671](https://github.com/napari/napari/pull/6671)) +- Making Points layer creation and update faster ([#6727](https://github.com/napari/napari/pull/6727)) +- Remove unnecessary early call to np.asarray before thick slicing ([#6735](https://github.com/napari/napari/pull/6735)) +- perf: remove extra highlight calls ([#6893](https://github.com/napari/napari/pull/6893)) + +## Bug Fixes + +- Quick silo dev version settings in a dev sub-directory ([#5322](https://github.com/napari/napari/pull/5322)) +- Fix conda avaliability check ([#5496](https://github.com/napari/napari/pull/5496)) +- Bugfix: PR build of docs doesn't use proper napari versioning for substitutions ([#5557](https://github.com/napari/napari/pull/5557)) +- fix various keybinding/shortcut bugs ([#5604](https://github.com/napari/napari/pull/5604)) +- Bugfix (macOS): Remove PYTHONEXECUTABLE from `env` for conda installs ([#5622](https://github.com/napari/napari/pull/5622)) +- Fix waiting for multiple signals in threading progress bar test ([#5637](https://github.com/napari/napari/pull/5637)) +- Update the sliders `axis_label` widget to be a `QElidingLineEdit` instance ([#5665](https://github.com/napari/napari/pull/5665)) +- Fix usage of closed interval dims and unify extents calculations ([#5751](https://github.com/napari/napari/pull/5751)) +- Add aditional guard at the end of `test_worker_may_exceed_total` ([#5781](https://github.com/napari/napari/pull/5781)) +- Return full colormap dict in get_state ([#5782](https://github.com/napari/napari/pull/5782)) +- Add test coverage for async slicing of points and fix rounding bug ([#5783](https://github.com/napari/napari/pull/5783)) +- Add pydantic<2 constrains to plugin install ([#5785](https://github.com/napari/napari/pull/5785)) +- Readd exception to event proxy ([#5797](https://github.com/napari/napari/pull/5797)) +- Bugfix: do not allow drawing while adjusting the brush size with the mouse ([#5842](https://github.com/napari/napari/pull/5842)) +- Amend `pydantic` constraints in the plugin manager ([#5851](https://github.com/napari/napari/pull/5851)) +- Bugfix: Ensure bgcolor is set in __init__ of VispyCanvas ([#5970](https://github.com/napari/napari/pull/5970)) +- Make sure `open_sample` respects `reader_plugin` for sample URIs ([#5971](https://github.com/napari/napari/pull/5971)) +- Async refresh when experimental setting is on ([#6008](https://github.com/napari/napari/pull/6008)) +- Add validation logic for `Dims.last_used` to prevent slider selection errors when rolling dims ([#6024](https://github.com/napari/napari/pull/6024)) +- Update layer's loaded state before vispy and thumbnail ([#6026](https://github.com/napari/napari/pull/6026)) +- Fix string list JSON formatting ([#6033](https://github.com/napari/napari/pull/6033)) +- Remove 3D multiscale warning ([#6070](https://github.com/napari/napari/pull/6070)) +- A few small improvements to async slicing ([#6080](https://github.com/napari/napari/pull/6080)) +- Add toggle status view menu items ([#6137](https://github.com/napari/napari/pull/6137)) +- Fix PR html stripping workflow ([#6139](https://github.com/napari/napari/pull/6139)) +- Add test on top of #6142 ([#6167](https://github.com/napari/napari/pull/6167)) +- Bugfix: ensure thumbnail represents canvas when multiscale ([#6200](https://github.com/napari/napari/pull/6200)) +- Fix (N>4)D shapes. ([#6210](https://github.com/napari/napari/pull/6210)) +- Fix typing checks in PRs ([#6230](https://github.com/napari/napari/pull/6230)) +- convert Color to string ([#6243](https://github.com/napari/napari/pull/6243)) +- Fix link to artifacts in update dependecies comment ([#6270](https://github.com/napari/napari/pull/6270)) +- Fix setting shortcuts with modifier keys and only one modifier key as a shortcut on Windows/Linux ([#6330](https://github.com/napari/napari/pull/6330)) +- Pass key event from Main window to our internal mechanism ([#6419](https://github.com/napari/napari/pull/6419)) +- Restore old breakpointhook after console import in tests fixture ([#6436](https://github.com/napari/napari/pull/6436)) +- FIX: Remove `None` default from `_remove_dock_widget` ([#6481](https://github.com/napari/napari/pull/6481)) +- Fix crash on python -m napari ([#6484](https://github.com/napari/napari/pull/6484)) +- Bugfix: ensure gamma and opacity are floats ([#6498](https://github.com/napari/napari/pull/6498)) +- Restore quit shortcut ([#6526](https://github.com/napari/napari/pull/6526)) +- Fix contrast limits for single layer numpy case. ([#6535](https://github.com/napari/napari/pull/6535)) +- Fix check if plugin is available from conda ([#6545](https://github.com/napari/napari/pull/6545)) +- Set default dtype for empty `_ImageSliceResponse` ([#6552](https://github.com/napari/napari/pull/6552)) +- Ensure consistent layer tooltip ([#6589](https://github.com/napari/napari/pull/6589)) +- Make Shift-Up/Down in layer list expand and contract selection ([#6606](https://github.com/napari/napari/pull/6606)) +- Remove scaling of highlight width, fix showing shapes for uneven coordinates ([#6629](https://github.com/napari/napari/pull/6629)) +- Fix decomposition function to properly work with more than 2x2 matrices ([#6636](https://github.com/napari/napari/pull/6636)) +- Remove if that prevents from setting gamma in constructor ([#6650](https://github.com/napari/napari/pull/6650)) +- [Bugfix] update selection ctx keys before showing LayerList context menu ([#6664](https://github.com/napari/napari/pull/6664)) +- Fix offset in rendering of `TransformBox` of image/labels layers ([#6679](https://github.com/napari/napari/pull/6679)) +- Exclude size and symbol pts attributes from linking, because they depend on number of points ([#6687](https://github.com/napari/napari/pull/6687)) +- Fix shape layer infinite edge bug ([#6706](https://github.com/napari/napari/pull/6706)) +- [Dockerfile] update pip before installing napari ([#6728](https://github.com/napari/napari/pull/6728)) +- Fix npe1 samples menu building ([#6739](https://github.com/napari/napari/pull/6739)) +- [Maint, CI] Fix upgrade_test_constraints.yml to use pyproject.toml ([#6749](https://github.com/napari/napari/pull/6749)) +- Update description of `a`, `shift-a` points keybinds to reflect toggle ([#6750](https://github.com/napari/napari/pull/6750)) +- [Dockerfile] add missing opengl and x11 packages to the base image ([#6754](https://github.com/napari/napari/pull/6754)) +- Keep `qtpy` in headless tests and fix resulting failure ([#6764](https://github.com/napari/napari/pull/6764)) +- Fix sync slicing of not yet visible layers ([#6766](https://github.com/napari/napari/pull/6766)) +- Remove compression scheme when saving boolean arrays as tif ([#6807](https://github.com/napari/napari/pull/6807)) +- Solving visual glitch when displaying tracks with missing timepoints ([#6808](https://github.com/napari/napari/pull/6808)) +- Fix `napari.utils.misc.is_iterable` function ([#6811](https://github.com/napari/napari/pull/6811)) +- Remove redundant `_view_actions.py` ([#6821](https://github.com/napari/napari/pull/6821)) +- refresh when canvas_size_limits are changed ([#6834](https://github.com/napari/napari/pull/6834)) +- Fix selection size when canvas limits are set for Points ([#6853](https://github.com/napari/napari/pull/6853)) +- Ensure bounding_box lines stay up to date between 2D and 3D ([#6855](https://github.com/napari/napari/pull/6855)) +- Fix zarr reading with unrelated files ([#6857](https://github.com/napari/napari/pull/6857)) +- Two bug fixes concerning 4D surfaces, ie surfaces with (t, z, y, x) vertices ([#6874](https://github.com/napari/napari/pull/6874)) +- [bugfix] Drop if guard on notification_manager to enable show_info from Jupyter ([#6882](https://github.com/napari/napari/pull/6882)) +- [bugfix] Warn if float image data being saved to non-tiff ([#6884](https://github.com/napari/napari/pull/6884)) +- Disable copying layer transform metadata when selecting multiple layers ([#6887](https://github.com/napari/napari/pull/6887)) +- Fix use of scaling in vispy points ([#6894](https://github.com/napari/napari/pull/6894)) +- Fix point highlight thickness ([#6896](https://github.com/napari/napari/pull/6896)) +- Fix shapes mouse click and double click behavior on partial shapes ([#6912](https://github.com/napari/napari/pull/6912)) +- Again fix translate of overlays (this time with tests) ([#6927](https://github.com/napari/napari/pull/6927)) +- Add warning notification when connectivity errors occur in when opening the plugin manager ([#6931](https://github.com/napari/napari/pull/6931)) +- Fix array data copy behavior for numpy 1 and 2 consistency ([#6932](https://github.com/napari/napari/pull/6932)) +- [bugfix] Swap digit and `backspace` for Shapes & Points `delete_selected` keybinds ([#6933](https://github.com/napari/napari/pull/6933)) +- Fix callback for `File -> Open Folder...` action ([#6935](https://github.com/napari/napari/pull/6935)) +- fix `create_func` to respect `rename_argument` decorator ([#6970](https://github.com/napari/napari/pull/6970)) +- Do not crash napari viewer if error happen on open file via cli ([#6971](https://github.com/napari/napari/pull/6971)) +- Fix viewer scale bar color update ([#6989](https://github.com/napari/napari/pull/6989)) +- Remove NumPy 2 pin, fix direct colormap with keys outside data dtype ([#6998](https://github.com/napari/napari/pull/6998)) +- Fix switching from 2d to 3d with 2d points ([#7004](https://github.com/napari/napari/pull/7004)) +- Fix importerror and message for lxml_html_clean ([#7017](https://github.com/napari/napari/pull/7017)) + +## API Changes + +- Add .to_rgb_dict() to Theme class. ([#4759](https://github.com/napari/napari/pull/4759)) +- Thick Slices (Dims as nD-box instead of nD-point) ([#5522](https://github.com/napari/napari/pull/5522)) +- Lock dimensions / axes while rolling ([#5986](https://github.com/napari/napari/pull/5986)) +- Remove deprecated code from Labels layer ([#6641](https://github.com/napari/napari/pull/6641)) + +## Deprecations + +- MAINT: Remove unused function. ([#5041](https://github.com/napari/napari/pull/5041)) +- MAINT: remove deprecated Alias. ([#5043](https://github.com/napari/napari/pull/5043)) +- Fix typing in _app_model ([#6059](https://github.com/napari/napari/pull/6059)) +- Rename `edge_*` attributes and references to `border_*` on points layer ([#6402](https://github.com/napari/napari/pull/6402)) +- Add deprecation message to CallDefault function partly resolves issue#6257 ([#6901](https://github.com/napari/napari/pull/6901)) + +## Build Tools + +- ci(dependabot): bump WebFreak001/deploy-nightly from 1.1.0 to 1.2.0 ([#5159](https://github.com/napari/napari/pull/5159)) +- ci(dependabot): bump convictional/trigger-workflow-and-wait from 1.6.1 to 1.6.4 ([#5293](https://github.com/napari/napari/pull/5293)) +- ci(dependabot): bump bruceadams/get-release from 1.2.3 to 1.3.2 ([#5294](https://github.com/napari/napari/pull/5294)) +- ci(dependabot): bump convictional/trigger-workflow-and-wait from 1.6.4 to 1.6.5 ([#5384](https://github.com/napari/napari/pull/5384)) +- ci(dependabot): bump WebFreak001/deploy-nightly from 1.2.0 to 2.0.0 ([#5385](https://github.com/napari/napari/pull/5385)) +- ci(dependabot): bump docker/build-push-action from 3 to 4 ([#5523](https://github.com/napari/napari/pull/5523)) +- ci(dependabot): bump toshimaru/auto-author-assign from 1.6.1 to 1.6.2 ([#5524](https://github.com/napari/napari/pull/5524)) +- fix various keybinding/shortcut bugs ([#5604](https://github.com/napari/napari/pull/5604)) +- ci(dependabot): bump peter-evans/create-pull-request from 4 to 5 ([#5792](https://github.com/napari/napari/pull/5792)) +- ci(dependabot): bump actions/setup-python from 2 to 4 ([#6201](https://github.com/napari/napari/pull/6201)) +- ci(dependabot): bump docker/login-action from 2.1.0 to 3.0.0 ([#6263](https://github.com/napari/napari/pull/6263)) +- ci(dependabot): bump actions/checkout from 2 to 4 ([#6264](https://github.com/napari/napari/pull/6264)) +- ci(dependabot): bump docker/build-push-action from 4 to 5 ([#6280](https://github.com/napari/napari/pull/6280)) +- ci(dependabot): bump docker/metadata-action from 4 to 5 ([#6282](https://github.com/napari/napari/pull/6282)) + +## Documentation + +- DOCS: Consolidate Makefiles ([#5011](https://github.com/napari/napari/pull/5011)) +- Move docs to separate repo ([#5216](https://github.com/napari/napari/pull/5216)) +- DOC Fix actions file docstrings ([#5285](https://github.com/napari/napari/pull/5285)) +- Update build_docs workflow ([#5405](https://github.com/napari/napari/pull/5405)) +- Bugfix: PR build of docs doesn't use proper napari versioning for substitutions ([#5557](https://github.com/napari/napari/pull/5557)) +- Add link to napari/docs in Readme file. ([#5814](https://github.com/napari/napari/pull/5814)) +- Fix typing in layers.labels ([#5858](https://github.com/napari/napari/pull/5858)) +- DOC: fix incorrect doc in layer-base ([#5996](https://github.com/napari/napari/pull/5996)) +- Add vortex optical flow example ([#6041](https://github.com/napari/napari/pull/6041)) +- DOC Amend `open_sample` docstring str->URI ([#6108](https://github.com/napari/napari/pull/6108)) +- DOC: misc syntax/typos ([#6387](https://github.com/napari/napari/pull/6387)) +- DOC: misc fixes ([#6429](https://github.com/napari/napari/pull/6429)) +- Change `vortex.py` example to enable its page build in the documentation ([#6475](https://github.com/napari/napari/pull/6475)) +- Fix generation of layer creation functions docstrings ([#6558](https://github.com/napari/napari/pull/6558)) +- Update docs constraints for napari-sphinx-theme 0.3.0 ([#6598](https://github.com/napari/napari/pull/6598)) +- Update docstrings in `colormap_utils` for seed parameter effective range ([#6688](https://github.com/napari/napari/pull/6688)) +- Update shapes.py add_rectangle and add_ellipse docstrings ([#6704](https://github.com/napari/napari/pull/6704)) +- Update docstring for _get_console method of QtViewer class ([#6723](https://github.com/napari/napari/pull/6723)) +- DOC Explicitly describe use of `show` in `make_napari_viewer` ([#6724](https://github.com/napari/napari/pull/6724)) +- DOC Add info to `make_napari_viewer` docstring ([#6774](https://github.com/napari/napari/pull/6774)) +- Expose NotebookScreenshot docstring ([#6833](https://github.com/napari/napari/pull/6833)) +- DOC Update `_mock_app` docstring ([#6903](https://github.com/napari/napari/pull/6903)) +- DOC Update menu action file docstrings ([#6904](https://github.com/napari/napari/pull/6904)) +- Front-load core devs in citation.cff, sorted by commits ([#6949](https://github.com/napari/napari/pull/6949)) +- Update CITATION.cff with contributors for 0.5.0 ([#6958](https://github.com/napari/napari/pull/6958)) +- Remove examples from docs repo and use main repo instead ([docs#1](https://github.com/napari/docs/pull/1)) +- Add build_docs action to PRs ([docs#6](https://github.com/napari/docs/pull/6)) +- Fix examples path in build_docs PR workflow ([docs#8](https://github.com/napari/docs/pull/8)) +- Updated issue and PR templates for this repo ([docs#36](https://github.com/napari/docs/pull/36)) +- how to use annotation with create_widget ([docs#68](https://github.com/napari/docs/pull/68)) +- Fix docs deployment with gallery env variable ([docs#70](https://github.com/napari/docs/pull/70)) +- Switch from GabrielBB/xvfb-action to aganders3/headless-gui ([docs#94](https://github.com/napari/docs/pull/94)) +- Update deploy_docs.yml to use metadata to use proper napari version substitution ([docs#99](https://github.com/napari/docs/pull/99)) +- CircleCI setup for PR documentation previews ([docs#104](https://github.com/napari/docs/pull/104)) +- Change `CIRCLECI_TOKEN` to `GITHUB_TOKEN` in `circleci.yml` workflow file. ([docs#108](https://github.com/napari/docs/pull/108)) +- Documentation for alt-click visibility icon to show only that layer (napari/napari#5618) ([docs#121](https://github.com/napari/docs/pull/121)) +- Add pr dependency check ([docs#124](https://github.com/napari/docs/pull/124)) +- Layer documentation enhancements ([docs#125](https://github.com/napari/docs/pull/125)) +- Using Dask and Napari to view and process 100µm resolution human brain dataset ([docs#132](https://github.com/napari/docs/pull/132)) +- Fix CircleCI token name and remove outdated artifact action ([docs#136](https://github.com/napari/docs/pull/136)) +- Add instructions on how to check preview of built docs ([docs#140](https://github.com/napari/docs/pull/140)) +- Add documentation of udpate tokens for automated actions. ([docs#144](https://github.com/napari/docs/pull/144)) +- Use constraints file when installing dependencies to build docs ([docs#162](https://github.com/napari/docs/pull/162)) +- Fix build and deploy workflow ([docs#164](https://github.com/napari/docs/pull/164)) +- Update README to display CZI logo for dark and light GitHub themes ([docs#165](https://github.com/napari/docs/pull/165)) +- Use constraints during build docs on circleCI ([docs#167](https://github.com/napari/docs/pull/167)) +- Fix closing of html comment in PR template ([docs#168](https://github.com/napari/docs/pull/168)) +- Add documentation for #5806 ([docs#177](https://github.com/napari/docs/pull/177)) +- Update Viewer tutorial for extra layer contextual menu visibility options (napari/#5574) ([docs#183](https://github.com/napari/docs/pull/183)) +- Use python version range instead of min version ([docs#194](https://github.com/napari/docs/pull/194)) +- Fix trailing whitespace with pre-commit ([docs#198](https://github.com/napari/docs/pull/198)) +- Add extra note for Windows and Make to avoid running `rm -rf C:\Users` ([docs#201](https://github.com/napari/docs/pull/201)) +- Plugin docs restructure of content ([docs#203](https://github.com/napari/docs/pull/203)) +- Add documentation how to avoid fickering windows when running test locally ([docs#215](https://github.com/napari/docs/pull/215)) +- Run PR depenecy check on every comment added to PR ([docs#216](https://github.com/napari/docs/pull/216)) +- Adds guide on CI setup for docs building and website deployment ([docs#220](https://github.com/napari/docs/pull/220)) +- Add TOML lexer to pygments set up ([docs#229](https://github.com/napari/docs/pull/229)) +- Remove items not relevant to documentation in PR template ([docs#234](https://github.com/napari/docs/pull/234)) +- [Content] Add docs for the new lock dims of the roll button ([docs#242](https://github.com/napari/docs/pull/242)) +- Fix pydantic import ([docs#255](https://github.com/napari/docs/pull/255)) +- Add option to fail docs build on gallery example execution error ([docs#256](https://github.com/napari/docs/pull/256)) +- Uniform circleCI and build_docs workflows across repositories ([docs#266](https://github.com/napari/docs/pull/266)) +- Improve next steps part of installation guide ([docs#275](https://github.com/napari/docs/pull/275)) +- Re-apply: Image layers can't have converted data type ([docs#276](https://github.com/napari/docs/pull/276)) +- Add section on extending napari ([docs#286](https://github.com/napari/docs/pull/286)) +- Add env constraint to 'deploy_docs' workflow ([docs#287](https://github.com/napari/docs/pull/287)) +- Add to console details to "How to launch `napari`" ([docs#292](https://github.com/napari/docs/pull/292)) +- Add mp4 and png fallback to webm videos ([docs#298](https://github.com/napari/docs/pull/298)) +- Use reference labels instead of paths ([docs#301](https://github.com/napari/docs/pull/301)) +- Add theme page to 'how tos' ([docs#302](https://github.com/napari/docs/pull/302)) +- Expand headless env testing in "Test organization" ([docs#303](https://github.com/napari/docs/pull/303)) +- Add/improve documentation about napari's software architecture ([docs#304](https://github.com/napari/docs/pull/304)) +- Replace references to 'edge' attributes with 'border' in Points docs ([docs#306](https://github.com/napari/docs/pull/306)) +- Add documentation for `New from clipboard` feature ([docs#307](https://github.com/napari/docs/pull/307)) +- NAP-6: Updates after discussion and review ([docs#312](https://github.com/napari/docs/pull/312)) +- Use tabs for the install as Python package guide ([docs#313](https://github.com/napari/docs/pull/313)) +- Fix execution of magicgui guide ([docs#314](https://github.com/napari/docs/pull/314)) +- Exclude inherited tqdm members from documentation ([docs#316](https://github.com/napari/docs/pull/316)) +- Re-organise 'Contributing' section ([docs#318](https://github.com/napari/docs/pull/318)) +- Update packaging guide by removing outdated `constructor` fork details ([docs#319](https://github.com/napari/docs/pull/319)) +- Update app-model documentation ([docs#325](https://github.com/napari/docs/pull/325)) +- Remove sphinx pin to rely on upstream constraints ([docs#334](https://github.com/napari/docs/pull/334)) +- Move note after screeenshot in install guide ([docs#335](https://github.com/napari/docs/pull/335)) +- Update links to napari hub guide ([docs#336](https://github.com/napari/docs/pull/336)) +- Fix broken links and references ([docs#338](https://github.com/napari/docs/pull/338)) +- Add announcement banner html to enable config ([docs#341](https://github.com/napari/docs/pull/341)) +- Add release notes for 0.4.19 ([docs#346](https://github.com/napari/docs/pull/346)) +- Update version switcher for 0.4.19 release ([docs#347](https://github.com/napari/docs/pull/347)) +- Add 0.4.19 to toc ([docs#349](https://github.com/napari/docs/pull/349)) +- Fix execution of magicgui guide (2) ([docs#351](https://github.com/napari/docs/pull/351)) +- Replace survey with help banner ([docs#356](https://github.com/napari/docs/pull/356)) +- [ENH] Add napari.utils.transforms to API docs ([docs#359](https://github.com/napari/docs/pull/359)) +- [Content] Add docs for napari/napari#6590 shift-option arrows to cycle through layers one at a time ([docs#360](https://github.com/napari/docs/pull/360)) +- Clarify optionality of type annotations for writing a plugin ([docs#367](https://github.com/napari/docs/pull/367)) +- Dynamicly calculate supported python version range ([docs#368](https://github.com/napari/docs/pull/368)) +- Add info on testing `QWidget` visibility ([docs#370](https://github.com/napari/docs/pull/370)) +- Summary of local setup for quickstart for devs ([docs#372](https://github.com/napari/docs/pull/372)) +- Add info about tests that require window focus and `pyautogui` permissions setup on macOS ([docs#375](https://github.com/napari/docs/pull/375)) +- Inlcude docstring of `make_napari_viewer` in `testing.md` ([docs#378](https://github.com/napari/docs/pull/378)) +- Add cross reference to other testing info in `testing.md` ([docs#379](https://github.com/napari/docs/pull/379)) +- Add note on using str instead of importing for napari type annot in plugins ([docs#381](https://github.com/napari/docs/pull/381)) +- Use intersphinx for magicgui objects in `magicgui.md` ([docs#382](https://github.com/napari/docs/pull/382)) +- Fix napari.org rendering ([docs#386](https://github.com/napari/docs/pull/386)) +- Fix doc preview in PR CI ([docs#389](https://github.com/napari/docs/pull/389)) +- Update `docs_deployment.md` and add paths to workflow ([docs#390](https://github.com/napari/docs/pull/390)) +- Fix ALL Sphinx warnings ([docs#393](https://github.com/napari/docs/pull/393)) +- Add note about autogeneration of plugin docs ([docs#395](https://github.com/napari/docs/pull/395)) +- Add page on `magicgui` type registration ([docs#399](https://github.com/napari/docs/pull/399)) +- Minor update to instructions for updating tokens ([docs#401](https://github.com/napari/docs/pull/401)) +- Fix typo in `app_model.md` ([docs#402](https://github.com/napari/docs/pull/402)) +- Update `app-model` doc with new information about `_mock_app` fixture ([docs#403](https://github.com/napari/docs/pull/403)) +- Fixes display of inherited members of classes ([docs#404](https://github.com/napari/docs/pull/404)) +- Improve our 'Creating widgets' section ([docs#407](https://github.com/napari/docs/pull/407)) +- Fix broken magicgui and app-model docs links ([docs#410](https://github.com/napari/docs/pull/410)) +- Add Python resources to Installation tutorial ([docs#411](https://github.com/napari/docs/pull/411)) +- Update IFP rep on the SC to be Kyle and not Nick ([docs#412](https://github.com/napari/docs/pull/412)) +- [Content] clarify Image to labels, Labels to Image, and add docs for shapes to labels behavior ([docs#414](https://github.com/napari/docs/pull/414)) +- Update where app-model actions/providers/processors live in codebase ([docs#416](https://github.com/napari/docs/pull/416)) +- Update conda section of install docs ([docs#417](https://github.com/napari/docs/pull/417)) +- MacOS -> macOS ([docs#418](https://github.com/napari/docs/pull/418)) +- Replace use of properties with features ([docs#425](https://github.com/napari/docs/pull/425)) +- DOC Update finding submenu action in app-model ([docs#426](https://github.com/napari/docs/pull/426)) + +## Other Pull Requests + +- Add tests to cover slicing behavior when changing layers and data ([#4819](https://github.com/napari/napari/pull/4819)) +- Add examples to remote sample data & synthetic tests [for async work] ([#4987](https://github.com/napari/napari/pull/4987)) +- Use app model for plugins menu ([#4991](https://github.com/napari/napari/pull/4991)) +- MAINT: Misc unused variables and import. ([#5051](https://github.com/napari/napari/pull/5051)) +- Use same name in yml file and test name. ([#5065](https://github.com/napari/napari/pull/5065)) +- MAINT: Remove QtStateButton, marked for removal in 0.4.14 ([#5066](https://github.com/napari/napari/pull/5066)) +- Update config directory paths for perfmon tools ([#5081](https://github.com/napari/napari/pull/5081)) +- Use app-model keybindings internally ([#5103](https://github.com/napari/napari/pull/5103)) +- Ignore tags directory generated by Sphinx build ([#5104](https://github.com/napari/napari/pull/5104)) +- [pre-commit.ci] pre-commit autoupdate ([#5105](https://github.com/napari/napari/pull/5105)) +- Clarify package installer interface with abstract base class, and Pip/Conda subclasses (continued) ([#5124](https://github.com/napari/napari/pull/5124)) +- MAINT: comment out macos briefcase bundle ([#5144](https://github.com/napari/napari/pull/5144)) +- Use nightly.link to add comment to docs artifacts on PRs ([#5148](https://github.com/napari/napari/pull/5148)) +- Attempt to fix benchmark failing. ([#5175](https://github.com/napari/napari/pull/5175)) +- MAINT: Use positional only to make code a bit more idiomatic. ([#5179](https://github.com/napari/napari/pull/5179)) +- Update vendoring tool to check on matplotlib colormap ([#5181](https://github.com/napari/napari/pull/5181)) +- [pre-commit.ci] pre-commit autoupdate ([#5197](https://github.com/napari/napari/pull/5197)) +- Update plugin dialog design & functionality to add conda install ([#5198](https://github.com/napari/napari/pull/5198)) +- [pre-commit.ci] pre-commit autoupdate ([#5237](https://github.com/napari/napari/pull/5237)) +- Benchmark PR reporting fix ([#5246](https://github.com/napari/napari/pull/5246)) +- Image slice request and response for async slicing ([#5259](https://github.com/napari/napari/pull/5259)) +- Points slice request and response for new async slicing ([#5264](https://github.com/napari/napari/pull/5264)) +- Do not use random shapes in napari_builtins conftest fixtures ([#5287](https://github.com/napari/napari/pull/5287)) +- Add async slicing "force sync" ([#5299](https://github.com/napari/napari/pull/5299)) +- Use plugin display_name for widget parent menu ([#5305](https://github.com/napari/napari/pull/5305)) +- update benchmark ci ([#5309](https://github.com/napari/napari/pull/5309)) +- Fix text label translation ([#5321](https://github.com/napari/napari/pull/5321)) +- Exclude vendored things from absolutify imports ([#5324](https://github.com/napari/napari/pull/5324)) +- Add test coverage for async slicing of labels ([#5325](https://github.com/napari/napari/pull/5325)) +- [pre-commit.ci] pre-commit autoupdate ([#5336](https://github.com/napari/napari/pull/5336)) +- Fully specify cache path in pip install job ([#5357](https://github.com/napari/napari/pull/5357)) +- Add pre commit steep for remove unused imports ([#5359](https://github.com/napari/napari/pull/5359)) +- Add titles and tags to new gallery examples ([#5364](https://github.com/napari/napari/pull/5364)) +- Add GUI test coverage for changes to Labels.show_selected_label ([#5372](https://github.com/napari/napari/pull/5372)) +- [pre-commit.ci] pre-commit autoupdate ([#5375](https://github.com/napari/napari/pull/5375)) +- Calculate text positions for constant strings ([#5387](https://github.com/napari/napari/pull/5387)) +- [pre-commit.ci] pre-commit autoupdate ([#5392](https://github.com/napari/napari/pull/5392)) +- Configure `fail_on_no_env` for `tox-gh-actions` ([#5408](https://github.com/napari/napari/pull/5408)) +- Wait until a blocked test task is actually running ([#5424](https://github.com/napari/napari/pull/5424)) +- Refactor: Qt viewer and VispyCanvas ([#5432](https://github.com/napari/napari/pull/5432)) +- Installation: don't include pyqt5 (from [all]) in [dev] installs ([#5438](https://github.com/napari/napari/pull/5438)) +- Add auto canceling previous test after a new PR commit ([#5453](https://github.com/napari/napari/pull/5453)) +- [pre-commit.ci] pre-commit autoupdate ([#5462](https://github.com/napari/napari/pull/5462)) +- Add digital watermark to napari PNG screenshots ([#5494](https://github.com/napari/napari/pull/5494)) +- MAINT: add time limit for CI. ([#5495](https://github.com/napari/napari/pull/5495)) +- [pre-commit.ci] pre-commit autoupdate ([#5502](https://github.com/napari/napari/pull/5502)) +- [pre-commit.ci] pre-commit autoupdate ([#5518](https://github.com/napari/napari/pull/5518)) +- MAINT: Fix vendoring script and track closest commit. ([#5537](https://github.com/napari/napari/pull/5537)) +- Fix translation checks in CI ([#5562](https://github.com/napari/napari/pull/5562)) +- [pre-commit.ci] pre-commit autoupdate ([#5575](https://github.com/napari/napari/pull/5575)) +- Maint: Add time limit to --pre and comprehensive tests. ([#5597](https://github.com/napari/napari/pull/5597)) +- [pre-commit.ci] pre-commit autoupdate ([#5606](https://github.com/napari/napari/pull/5606)) +- Bugfix: ensure `tool` is set to conda for conda-installed packages ([#5624](https://github.com/napari/napari/pull/5624)) +- FIX: fix translation checking script. ([#5626](https://github.com/napari/napari/pull/5626)) +- [pre-commit.ci] pre-commit autoupdate ([#5627](https://github.com/napari/napari/pull/5627)) +- [maint] Update translation string wizard to offer auto-suggestions ([#5643](https://github.com/napari/napari/pull/5643)) +- Update PR template to front-load issue references ([#5659](https://github.com/napari/napari/pull/5659)) +- MAINT: Move suspected segfaulting test into its own file. ([#5676](https://github.com/napari/napari/pull/5676)) +- Unvendor lazy_loader ([#5681](https://github.com/napari/napari/pull/5681)) +- Add CircleCI to enable docs preview on PRs ([#5714](https://github.com/napari/napari/pull/5714)) +- Check that release labels are added to each PR ([#5733](https://github.com/napari/napari/pull/5733)) +- [MAINT] Remove plugin manager source (move to napari/napari-plugin-manager) ([#5743](https://github.com/napari/napari/pull/5743)) +- [pre-commit.ci] pre-commit autoupdate ([#5765](https://github.com/napari/napari/pull/5765)) +- Use `GITHUB_TOKEN` to create test dependecies PR ([#5774](https://github.com/napari/napari/pull/5774)) +- Use fine grained personal token for test contrains and vendored update ([#5777](https://github.com/napari/napari/pull/5777)) +- Add tests for io utils to save images ([#5780](https://github.com/napari/napari/pull/5780)) +- Use tox-min-req for min-req tests ([#5784](https://github.com/napari/napari/pull/5784)) +- [pre-commit.ci] pre-commit autoupdate ([#5793](https://github.com/napari/napari/pull/5793)) +- Update README to display CZI logo for dark and light GitHub themes ([#5800](https://github.com/napari/napari/pull/5800)) +- Improve discoverability of napari/docs repository. ([#5821](https://github.com/napari/napari/pull/5821)) +- MAINT: Add backend info to CI comprehensive test names ([#5822](https://github.com/napari/napari/pull/5822)) +- Move mypy config to pyproject.toml ([#5825](https://github.com/napari/napari/pull/5825)) +- Fix some typing in colormap utils ([#5832](https://github.com/napari/napari/pull/5832)) +- Improve type annotation for image layer and related ([#5843](https://github.com/napari/napari/pull/5843)) +- Fix typing errors in layers.image ([#5852](https://github.com/napari/napari/pull/5852)) +- Add tests/more tests to widgets with low coverage ([#5864](https://github.com/napari/napari/pull/5864)) +- Fix type checking for layers.vectors ([#5870](https://github.com/napari/napari/pull/5870)) +- Fix type checking in layers.surface ([#5871](https://github.com/napari/napari/pull/5871)) +- test: [Automatic] Constraints upgrades: `dask`, `hypothesis`, `imageio`, `napari-svg`, `pandas`, `pint`, `pydantic`, `pytest-cov`, `tensorstore` ([#5881](https://github.com/napari/napari/pull/5881)) +- Use a nightly pypi index for numpy & scipy, used by the --pre build ([#5882](https://github.com/napari/napari/pull/5882)) +- Remove pycln (redundant with ruff F401 rule) ([#5887](https://github.com/napari/napari/pull/5887)) +- Mock QtConsole in tests ([#5890](https://github.com/napari/napari/pull/5890)) +- Consistent types for vector inputs/outputs in base layer ([#5892](https://github.com/napari/napari/pull/5892)) +- MAINT: Fix more typing and enable mypy on more files. ([#5897](https://github.com/napari/napari/pull/5897)) +- Add __all__ to qthreading and progress ([#5898](https://github.com/napari/napari/pull/5898)) +- Fix typing in translations ([#5900](https://github.com/napari/napari/pull/5900)) +- ENH: Use dict to set `MenuID` in view actions ([#5903](https://github.com/napari/napari/pull/5903)) +- [pre-commit.ci] pre-commit autoupdate ([#5906](https://github.com/napari/napari/pull/5906)) +- [Maint] CI: Use `RUNNER_OS` instead of `PLATFORM` ([#5907](https://github.com/napari/napari/pull/5907)) +- MAINT: GitHub action Timeout increased by 5 minutes ([#5934](https://github.com/napari/napari/pull/5934)) +- Some napari.utils typing fixes ([#5936](https://github.com/napari/napari/pull/5936)) +- Add documentation, enhancement and maintenance fields to PR template ([#5943](https://github.com/napari/napari/pull/5943)) +- Add docs constraints file ([#5988](https://github.com/napari/napari/pull/5988)) +- Fix optional arg typing in napari._qt.containers ([#6004](https://github.com/napari/napari/pull/6004)) +- [pre-commit.ci] pre-commit autoupdate ([#6009](https://github.com/napari/napari/pull/6009)) +- Partially fix translations testing ([#6014](https://github.com/napari/napari/pull/6014)) +- Fix typing in napari.layers.base ([#6028](https://github.com/napari/napari/pull/6028)) +- Add test for `QtToolTipEventFilter` ([#6066](https://github.com/napari/napari/pull/6066)) +- Pin numpy below 2 ([#6073](https://github.com/napari/napari/pull/6073)) +- Fix typing in napari.components.overlays ([#6076](https://github.com/napari/napari/pull/6076)) +- Fix transform_utils typing ([#6082](https://github.com/napari/napari/pull/6082)) +- Task: remove html comments from pr description ([#6086](https://github.com/napari/napari/pull/6086)) +- Reduce noise in PR template ([#6092](https://github.com/napari/napari/pull/6092)) +- Allow contributors to update test constraints using a comment ([#6101](https://github.com/napari/napari/pull/6101)) +- Exclude ... from coverage ([#6103](https://github.com/napari/napari/pull/6103)) +- Pass `QT_QPA_PLATFORM` through tox configuration ([#6110](https://github.com/napari/napari/pull/6110)) +- Remove unused parameters from private function. ([#6131](https://github.com/napari/napari/pull/6131)) +- Fix typing in napari.utils.perf ([#6132](https://github.com/napari/napari/pull/6132)) +- Use faster version of black ([#6133](https://github.com/napari/napari/pull/6133)) +- Fix some typing in napari.utils.events ([#6142](https://github.com/napari/napari/pull/6142)) +- test: [Automatic] Constraints upgrades: `hypothesis`, `magicgui`, `psygnal`, `tensorstore`, `tifffile`, `tqdm`, `virtualenv` ([#6143](https://github.com/napari/napari/pull/6143)) +- Update PR editing script to remove html. ([#6144](https://github.com/napari/napari/pull/6144)) +- Update PR editing action script to remove double empty lines in PR description ([#6150](https://github.com/napari/napari/pull/6150)) +- More typing of napari/utils. ([#6152](https://github.com/napari/napari/pull/6152)) +- Update typing informations in `_app_model/injection/_processors.py` and `components/layerlist.py` ([#6153](https://github.com/napari/napari/pull/6153)) +- Fix types in 'napari.utils.colormaps.categorical_colormap' ([#6154](https://github.com/napari/napari/pull/6154)) +- Fix incorrect types in color_transformations. ([#6155](https://github.com/napari/napari/pull/6155)) +- Refactor test running for reduce CI time ([#6156](https://github.com/napari/napari/pull/6156)) +- Check if milestone and label is added to PR ([#6158](https://github.com/napari/napari/pull/6158)) +- Enable type-checking for `napari.components.experimental`. ([#6166](https://github.com/napari/napari/pull/6166)) +- Fix typing and clearer code in evented-set. ([#6168](https://github.com/napari/napari/pull/6168)) +- Fix and enable typing of selectable lists ([#6169](https://github.com/napari/napari/pull/6169)) +- Add PyQt6 to tox -e mypy ([#6170](https://github.com/napari/napari/pull/6170)) +- Remove an "if" that prevents proper run of "upgrade dependecies" wokflow if triggered by comment ([#6171](https://github.com/napari/napari/pull/6171)) +- Misc typing fixes ([#6172](https://github.com/napari/napari/pull/6172)) +- Fix typo in path to file for upgrade dependencies ([#6173](https://github.com/napari/napari/pull/6173)) +- Update constraints upgrade script to run with appropriate events ([#6175](https://github.com/napari/napari/pull/6175)) +- Add missed "and milestone" ([#6176](https://github.com/napari/napari/pull/6176)) +- Do not clone repository to subdirectory in examples test ([#6181](https://github.com/napari/napari/pull/6181)) +- Add a timeout to some GH actions tests. ([#6187](https://github.com/napari/napari/pull/6187)) +- Fix typing in components.viewer_model ([#6188](https://github.com/napari/napari/pull/6188)) +- DOC Add comment in `_instantiate_dock_widget` ([#6189](https://github.com/napari/napari/pull/6189)) +- Fix some typing in napari.components ([#6203](https://github.com/napari/napari/pull/6203)) +- Allow to use all ViewerModel kwargs in Viewer constructor ([#6209](https://github.com/napari/napari/pull/6209)) +- Fix upgrade dependencies wokflow ([#6211](https://github.com/napari/napari/pull/6211)) +- Replace more np.all( ... = ...) with np.array_equal ([#6213](https://github.com/napari/napari/pull/6213)) +- cleanup np.all(... == ...) from test_points.py ([#6217](https://github.com/napari/napari/pull/6217)) +- remove np.all(... == ...) in test_surface.py ([#6218](https://github.com/napari/napari/pull/6218)) +- [pre-commit.ci] pre-commit autoupdate ([#6221](https://github.com/napari/napari/pull/6221)) +- [pre-commit.ci] pre-commit autoupdate ([#6229](https://github.com/napari/napari/pull/6229)) +- Move `test_file_menu.py` to new app model location ([#6233](https://github.com/napari/napari/pull/6233)) +- More removal of np.all(... == ...) ([#6238](https://github.com/napari/napari/pull/6238)) +- Remove sphinx dependency from defaults dependecies ([#6239](https://github.com/napari/napari/pull/6239)) +- MAINT: Use scipy builtins rotation to compute quaternions. ([#6241](https://github.com/napari/napari/pull/6241)) +- MAINT: Replace `assert np.all(? == ?)` with `assert_array_equal` ([#6244](https://github.com/napari/napari/pull/6244)) +- Fix some typing in napari._vispy ([#6245](https://github.com/napari/napari/pull/6245)) +- Type _WeakCounter ([#6246](https://github.com/napari/napari/pull/6246)) +- Fix typing in napari.utils.theme ([#6247](https://github.com/napari/napari/pull/6247)) +- remove: napari.qt.progress (deprecated in 0.4.11) ([#6252](https://github.com/napari/napari/pull/6252)) +- Restore 'V' keybinding for layer visibiltiy toggle ([#6261](https://github.com/napari/napari/pull/6261)) +- Update `app-model`, `dask`, `fsspec`, `hypothesis`, `imageio`, `ipython`, `jsonschema`, `matplotlib`, `numpy`, `pandas`, `pillow`, `psygnal`, `pytest`, `qtconsole`, `qtpy`, `rich`, `scipy`, `superqt`, `tensorstore`, `tifffile`, `virtualenv`, `xarray`, `zarr` ([#6265](https://github.com/napari/napari/pull/6265)) +- [pre-commit.ci] pre-commit autoupdate ([#6266](https://github.com/napari/napari/pull/6266)) +- Fix nitpicks in `id` and `title` `Action` fields in samples menu ([#6267](https://github.com/napari/napari/pull/6267)) +- ENH Make `_open_preferences_dialog` return `PreferencesDialog` ([#6269](https://github.com/napari/napari/pull/6269)) +- Bump app-model ([#6271](https://github.com/napari/napari/pull/6271)) +- Use `MenuID` in sample menu tests ([#6273](https://github.com/napari/napari/pull/6273)) +- Fix benchmark suite virtualenvs, and disable broken memory benchmarks ([#6278](https://github.com/napari/napari/pull/6278)) +- [pre-commit.ci] pre-commit autoupdate ([#6287](https://github.com/napari/napari/pull/6287)) +- Adding helper function for events and property deprecation ([#6288](https://github.com/napari/napari/pull/6288)) +- Fix labels for dependabot ([#6290](https://github.com/napari/napari/pull/6290)) +- [Maintenance] Fix missing v in the docker-login action version ([#6291](https://github.com/napari/napari/pull/6291)) +- MAINT: Remove auto-author-assign ([#6292](https://github.com/napari/napari/pull/6292)) +- Remove a few of the last instance of np.all(? == ?). ([#6293](https://github.com/napari/napari/pull/6293)) +- Enable memory benchmarks for layers ([#6295](https://github.com/napari/napari/pull/6295)) +- [Maint] Add zarr to optional dependencies in pyproject.toml ([#6297](https://github.com/napari/napari/pull/6297)) +- Set permissions to `allow upgrate_test_contstraints` work ([#6298](https://github.com/napari/napari/pull/6298)) +- Revert "MAINT: Use scipy builtins rotation to compute quaternions. (#6241)" ([#6299](https://github.com/napari/napari/pull/6299)) +- Add pystack to debug hanging linux test ([#6310](https://github.com/napari/napari/pull/6310)) +- [Maintenance] Update bug_report template to add napari --info ([#6312](https://github.com/napari/napari/pull/6312)) +- Use yaml for bug report Issue template ([#6313](https://github.com/napari/napari/pull/6313)) +- Add pre-commit check for basic formattings bugs ([#6315](https://github.com/napari/napari/pull/6315)) +- Add coverage report upload to comprehensive test ([#6316](https://github.com/napari/napari/pull/6316)) +- Update `dask`, `hypothesis`, `numpy`, `pillow`, `pretend`, `psutil`, `pyqt5`, `pyqt6`, `pyside6`, `superqt` ([#6322](https://github.com/napari/napari/pull/6322)) +- [pre-commit.ci] pre-commit autoupdate ([#6323](https://github.com/napari/napari/pull/6323)) +- Fix pre-commit configuration ([#6328](https://github.com/napari/napari/pull/6328)) +- Directly set author of commit in vendored workflow ([#6329](https://github.com/napari/napari/pull/6329)) +- Bump Mypy and some type fixes. ([#6332](https://github.com/napari/napari/pull/6332)) +- Add 'raise' option back to `strict_qt` in `make_napari_viewer` ([#6335](https://github.com/napari/napari/pull/6335)) +- Rename test_strings to validate_strings to stop confusing pytest ([#6338](https://github.com/napari/napari/pull/6338)) +- "no-commit-to-branch" is preventing contribution. ([#6341](https://github.com/napari/napari/pull/6341)) +- MAINT: Refine Mypy config for qtpy. ([#6342](https://github.com/napari/napari/pull/6342)) +- Disable ptrace protection to make pytest-pystack work ([#6343](https://github.com/napari/napari/pull/6343)) +- Fix labeler configuration ([#6344](https://github.com/napari/napari/pull/6344)) +- Add codecov token to reduce propability of fail to upload from main branch ([#6346](https://github.com/napari/napari/pull/6346)) +- Fix upstream deprecation: change `np.alltrue` to `np.array_equiv` ([#6347](https://github.com/napari/napari/pull/6347)) +- Maint: mypy opt-in to opt-out. ([#6352](https://github.com/napari/napari/pull/6352)) +- Full typing of a few more files in napari.utils.* ([#6356](https://github.com/napari/napari/pull/6356)) +- Fix build wheel workflow file name ([#6357](https://github.com/napari/napari/pull/6357)) +- Fix make release workflow ([#6359](https://github.com/napari/napari/pull/6359)) +- Typing: Fully type 5 more files ([#6361](https://github.com/napari/napari/pull/6361)) +- Update examples/clipboard_.py to fix FutureWarning ([#6365](https://github.com/napari/napari/pull/6365)) +- Update `fsspec`, `imageio`, `magicgui`, `napari-console`, `npe2`, `pillow`, `tensorstore`, `xarray` ([#6367](https://github.com/napari/napari/pull/6367)) +- fix `TransformChain.__getitem__` signature ([#6369](https://github.com/napari/napari/pull/6369)) +- Fix permission for JasonEtco/create-an-issue@v2 action ([#6370](https://github.com/napari/napari/pull/6370)) +- Automatic add `maintenance` label to upgrade dependecies workflow ([#6371](https://github.com/napari/napari/pull/6371)) +- [pre-commit.ci] pre-commit autoupdate ([#6373](https://github.com/napari/napari/pull/6373)) +- Ensure the conda bundle workflows have the appropriate permissions ([#6379](https://github.com/napari/napari/pull/6379)) +- Skip redundant pre-commit hooks ([#6389](https://github.com/napari/napari/pull/6389)) +- Update `babel`, `dask`, `pandas`, `pooch`, `pytest`, `qtpy`, `virtualenv` ([#6398](https://github.com/napari/napari/pull/6398)) +- Fix environment variable name name in docs build ([#6401](https://github.com/napari/napari/pull/6401)) +- ci(dependabot): bump actions/checkout from 3 to 4 ([#6403](https://github.com/napari/napari/pull/6403)) +- Fix some weird behaviors when using delete and backspace keys as shortcuts (with or without modifiers) ([#6406](https://github.com/napari/napari/pull/6406)) +- Use ruff to format strings to single quotes. ([#6407](https://github.com/napari/napari/pull/6407)) +- Fix linter warnings in qt_main_window ([#6409](https://github.com/napari/napari/pull/6409)) +- Unify circleci and build_docs workflows across repositories ([#6417](https://github.com/napari/napari/pull/6417)) +- Fix `test_singlescreen_window_settings` to allow it to run locally on multiscreen configuration ([#6422](https://github.com/napari/napari/pull/6422)) +- refactor `napari/_qt/_tests/test_async_slicing.py` to reduce fragility of test ([#6423](https://github.com/napari/napari/pull/6423)) +- Simplify unused parameters of Quaternion functions. ([#6424](https://github.com/napari/napari/pull/6424)) +- Still More typing V ([#6427](https://github.com/napari/napari/pull/6427)) +- Synchronize `rgb` docstring of `ViewerModel.add_image` and `Image` constructor ([#6428](https://github.com/napari/napari/pull/6428)) +- Fix milestone and label checker to be triggered by `milestoned`/`demilestoned` events ([#6430](https://github.com/napari/napari/pull/6430)) +- Refactor Skipped test ([#6431](https://github.com/napari/napari/pull/6431)) +- Update `dask`, `hypothesis`, `numpy`, `pandas`, `tensorstore`, `wrapt` ([#6441](https://github.com/napari/napari/pull/6441)) +- [pre-commit.ci] pre-commit autoupdate ([#6447](https://github.com/napari/napari/pull/6447)) +- add addtional pystack arguments ([#6457](https://github.com/napari/napari/pull/6457)) +- Bump docker image version to most recent from 3.x.x line ([#6458](https://github.com/napari/napari/pull/6458)) +- MAINT Bump magicgui version to v0.7.0 ([#6462](https://github.com/napari/napari/pull/6462)) +- Update `certifi`, `hypothesis`, `imageio`, `jsonschema`, `matplotlib`, `numba`, `pillow`, `psygnal`, `pydantic`, `pygments`, `qtconsole`, `rich`, `scipy`, `tensorstore`, `xarray` ([#6470](https://github.com/napari/napari/pull/6470)) +- Change default labels layer to uint8. ([#6471](https://github.com/napari/napari/pull/6471)) +- [pre-commit.ci] pre-commit autoupdate ([#6474](https://github.com/napari/napari/pull/6474)) +- Update `app-model`, `babel`, `coverage`, `dask`, `fsspec`, `hypothesis`, `imageio`, `ipython`, `lxml`, `magicgui`, `pandas`, `pint`, `psutil`, `pydantic`, `pyqt6`, `pytest-qt`, `tensorstore`, `tifffile`, `virtualenv`, `xarray` ([#6478](https://github.com/napari/napari/pull/6478)) +- [Maint, CI] Update circleci.yml for artifact location to fix redirector ([#6480](https://github.com/napari/napari/pull/6480)) +- Upload test artifacts on failure ([#6486](https://github.com/napari/napari/pull/6486)) +- Add testing_extra and optional dependencies when creating constraints ([#6487](https://github.com/napari/napari/pull/6487)) +- Add size and ndim to LayerDataProtocol ([#6494](https://github.com/napari/napari/pull/6494)) +- Fix scheduled benchmarks to test both last release and main ([#6496](https://github.com/napari/napari/pull/6496)) +- Type napari.layers.image helper sub-modules ([#6499](https://github.com/napari/napari/pull/6499)) +- [pre-commit.ci] pre-commit autoupdate ([#6505](https://github.com/napari/napari/pull/6505)) +- Add import lint back to CI ([#6506](https://github.com/napari/napari/pull/6506)) +- Finish typing layers.base helper files ([#6508](https://github.com/napari/napari/pull/6508)) +- Add lots of typing to layers.base ([#6509](https://github.com/napari/napari/pull/6509)) +- Add `_block_refresh()` to layers ([#6525](https://github.com/napari/napari/pull/6525)) +- [pre-commit.ci] pre-commit autoupdate ([#6528](https://github.com/napari/napari/pull/6528)) +- Add cache to Transform calculation ([#6536](https://github.com/napari/napari/pull/6536)) +- Rescale image data if outside `float32` precision ([#6537](https://github.com/napari/napari/pull/6537)) +- MNT: Use `partial` in samples menu to avoid leaking ([#6538](https://github.com/napari/napari/pull/6538)) +- Type two sub-modules in napari.layers.utils ([#6539](https://github.com/napari/napari/pull/6539)) +- Print a whole stack if throttler is not finished ([#6549](https://github.com/napari/napari/pull/6549)) +- Minimal changes for mlx (and jax) compatibility for Image layers ([#6553](https://github.com/napari/napari/pull/6553)) +- Improve repo configuration based on scientific python suggestions ([#6554](https://github.com/napari/napari/pull/6554)) +- Bump mypy version and fix errors ([#6557](https://github.com/napari/napari/pull/6557)) +- ci(dependabot): bump aganders3/headless-gui from 1 to 2 ([#6563](https://github.com/napari/napari/pull/6563)) +- ci(dependabot): bump actions/labeler from 4 to 5 ([#6565](https://github.com/napari/napari/pull/6565)) +- ci(dependabot): bump actions/setup-python from 4 to 5 ([#6567](https://github.com/napari/napari/pull/6567)) +- Fix test in napari_builtins to remove import from conftest ([#6568](https://github.com/napari/napari/pull/6568)) +- Update test to work with `app-model==0.2.4` ([#6573](https://github.com/napari/napari/pull/6573)) +- Add some more typing to utils.misc ([#6574](https://github.com/napari/napari/pull/6574)) +- Fix typing in utils.perf ([#6575](https://github.com/napari/napari/pull/6575)) +- Add more typing to utils.events.containers ([#6576](https://github.com/napari/napari/pull/6576)) +- [pre-commit.ci] pre-commit autoupdate ([#6581](https://github.com/napari/napari/pull/6581)) +- Try fix hanging tests by move `self.stop()` on end of functions that update GUI ([#6594](https://github.com/napari/napari/pull/6594)) +- Cache linear matrix decomposition in `Affine` class ([#6635](https://github.com/napari/napari/pull/6635)) +- bump actions/download-artifact and actions/upload-artifact from 3 to 4 ([#6638](https://github.com/napari/napari/pull/6638)) +- Fix labeler configuration after update to v5 ([#6639](https://github.com/napari/napari/pull/6639)) +- [pre-commit.ci] pre-commit autoupdate ([#6648](https://github.com/napari/napari/pull/6648)) +- Update `app-model`, `dask`, `hypothesis`, `ipython`, `lxml`, `matplotlib`, `npe2`, `numba`, `numpydoc`, `pandas`, `pillow`, `psygnal`, `pyside2`, `pyside6`, `scipy`, `superqt`, `xarray`, `zarr` ([#6655](https://github.com/napari/napari/pull/6655)) +- [pre-commit.ci] pre-commit autoupdate ([#6656](https://github.com/napari/napari/pull/6656)) +- Disallow incomplete defs in layers.image ([#6659](https://github.com/napari/napari/pull/6659)) +- Check untyped defs in _shapes_models ([#6660](https://github.com/napari/napari/pull/6660)) +- Typing improvements to vectors layer ([#6661](https://github.com/napari/napari/pull/6661)) +- Exclude problematic surface texture example from tests and docs building ([#6663](https://github.com/napari/napari/pull/6663)) +- [pre-commit.ci] pre-commit autoupdate ([#6672](https://github.com/napari/napari/pull/6672)) +- Migrate from setup.cfg to pyproject.toml ([#6673](https://github.com/napari/napari/pull/6673)) +- Raise exception on TransformChain.simplified when chain is empty ([#6674](https://github.com/napari/napari/pull/6674)) +- Add human readable names for Points layer subvisual ([#6675](https://github.com/napari/napari/pull/6675)) +- Refactor perf module for better readabiity ([#6686](https://github.com/napari/napari/pull/6686)) +- Fix upload of benchmarks ([#6697](https://github.com/napari/napari/pull/6697)) +- Bump minimum dask version ([#6698](https://github.com/napari/napari/pull/6698)) +- ci(dependabot): bump peter-evans/create-pull-request from 5 to 6 ([#6700](https://github.com/napari/napari/pull/6700)) +- ci(dependabot): bump codecov/codecov-action from 3 to 4 ([#6701](https://github.com/napari/napari/pull/6701)) +- ci(dependabot): bump aganders3/headless-gui from 1 to 2 ([#6702](https://github.com/napari/napari/pull/6702)) +- Disable pyside2 test on windows CI ([#6711](https://github.com/napari/napari/pull/6711)) +- Fix `--pre` workflow: missing setup to enable `pyautogui` usage on Linux ([#6713](https://github.com/napari/napari/pull/6713)) +- Typing improvements in layers.shapes ([#6716](https://github.com/napari/napari/pull/6716)) +- Improve typing in layers.surface ([#6717](https://github.com/napari/napari/pull/6717)) +- Create .Xauthority file in conftest.py rather than GHA workflows ([#6719](https://github.com/napari/napari/pull/6719)) +- use cross group dependecy in pyproject.toml ([#6720](https://github.com/napari/napari/pull/6720)) +- Exclude pyside 2 test on comprehensive workflow ([#6721](https://github.com/napari/napari/pull/6721)) +- Move base class for Image and Labels to its own file ([#6725](https://github.com/napari/napari/pull/6725)) +- [pre-commit.ci] pre-commit autoupdate ([#6737](https://github.com/napari/napari/pull/6737)) +- Drop Python 3.8, add Python 3.12 testing ([#6738](https://github.com/napari/napari/pull/6738)) +- Fix Remove lambdas when updating menus from context in `Window` ([#6740](https://github.com/napari/napari/pull/6740)) +- Improve widget clean up in `test_widget_hide_destroy` ([#6741](https://github.com/napari/napari/pull/6741)) +- Move providers from `_providers.py` to `_qproviders.py` ([#6743](https://github.com/napari/napari/pull/6743)) +- [Maint] Exclude pyqt6 6.6.1 on macOS in pyproject.toml ([#6748](https://github.com/napari/napari/pull/6748)) +- [pre-commit.ci] pre-commit autoupdate ([#6756](https://github.com/napari/napari/pull/6756)) +- [Maint] Put testing dependencies in [dev] as napari[testing] ([#6757](https://github.com/napari/napari/pull/6757)) +- bump tifffile dependency and remove deprecation-handling code ([#6765](https://github.com/napari/napari/pull/6765)) +- Move Qt view menu actions inside Qt folder ([#6767](https://github.com/napari/napari/pull/6767)) +- Improve typing in layers.points ([#6770](https://github.com/napari/napari/pull/6770)) +- [Maint] Correct a few more setup.cfg to pyproject.toml ([#6771](https://github.com/napari/napari/pull/6771)) +- [maint] drop unused experimental vendor humanize and cachetools ([#6772](https://github.com/napari/napari/pull/6772)) +- Switch from black to ruff-format ([#6775](https://github.com/napari/napari/pull/6775)) +- numpy version 2.0 compatibility ([#6776](https://github.com/napari/napari/pull/6776)) +- Remove app-model CommandId enum in favor of plain strings ([#6777](https://github.com/napari/napari/pull/6777)) +- Sort parameters in docstring and `__init__` of `Layer` ([#6779](https://github.com/napari/napari/pull/6779)) +- Implement validation of docstrings and kwargs order ([#6782](https://github.com/napari/napari/pull/6782)) +- Sort docstring and kwargs of Points layer ([#6784](https://github.com/napari/napari/pull/6784)) +- Sort docstring and kwargs of Shapes layer ([#6786](https://github.com/napari/napari/pull/6786)) +- Sort docstring and kwargs of Surface layer ([#6787](https://github.com/napari/napari/pull/6787)) +- Sort docstring and kwargs of Tracks layer ([#6788](https://github.com/napari/napari/pull/6788)) +- improve stack trace of autogenerated `ViewerModel.add_xxxx` methods ([#6791](https://github.com/napari/napari/pull/6791)) +- Move _is_moving property from Layer to Shapes ([#6795](https://github.com/napari/napari/pull/6795)) +- Fix `ImportError: lxml.html.clean module is now a separate project lxml_html_clean` over test suite (Ubuntu 20.04 and benchmarks) ([#6799](https://github.com/napari/napari/pull/6799)) +- [pre-commit.ci] pre-commit autoupdate ([#6800](https://github.com/napari/napari/pull/6800)) +- Add more typing to two napari.layers sub-modules ([#6803](https://github.com/napari/napari/pull/6803)) +- [maint] Fix deploy_docs.yml for change in napari/docs workflow ([#6809](https://github.com/napari/napari/pull/6809)) +- Sort docstring and kwargs of Vectors layer ([#6810](https://github.com/napari/napari/pull/6810)) +- Fix some rst syntax in docstrings ([#6812](https://github.com/napari/napari/pull/6812)) +- Speedup `napari.layers.utils._test.test_stack_utils.py` ([#6813](https://github.com/napari/napari/pull/6813)) +- [Maint] Update CircleCI config.yml for changes in napari/docs Makefile ([#6814](https://github.com/napari/napari/pull/6814)) +- Add possibility to test consistency of docstring content between base class and class ([#6816](https://github.com/napari/napari/pull/6816)) +- Rename `axes_labels` to `axis_labels` in some internal variables and docstrings ([#6817](https://github.com/napari/napari/pull/6817)) +- Add workflow for automatically remove `ready to merge` label ([#6818](https://github.com/napari/napari/pull/6818)) +- [pre-commit.ci] pre-commit autoupdate ([#6820](https://github.com/napari/napari/pull/6820)) +- Move `_mock_app` fixture to `_testsupport.py` and add it to `make_napari_viewer` ([#6823](https://github.com/napari/napari/pull/6823)) +- add test for ScalarField docstring, fix pointed bugs ([#6824](https://github.com/napari/napari/pull/6824)) +- Add write permission to `remove_ready_to_merge.yml` workflow ([#6825](https://github.com/napari/napari/pull/6825)) +- Bump python from 3.9 to 3.12 in pre-release tests ([#6826](https://github.com/napari/napari/pull/6826)) +- fix "Remove ready to merge label" ([#6830](https://github.com/napari/napari/pull/6830)) +- Remove "ready to merge" label action part 3 ([#6832](https://github.com/napari/napari/pull/6832)) +- ci(dependabot): bump the actions group with 2 updates ([#6835](https://github.com/napari/napari/pull/6835)) +- DeprecationWarning in ensure_iterable and is_iterable, Closes #6256 ([#6836](https://github.com/napari/napari/pull/6836)) +- Do not crash test on graphviz installation fail ([#6837](https://github.com/napari/napari/pull/6837)) +- Update `hypothesis`, `pandas`, `pydantic` ([#6838](https://github.com/napari/napari/pull/6838)) +- Allow to use "remove ready to merge lablel" and "edit PR description" callable from another repository ([#6839](https://github.com/napari/napari/pull/6839)) +- Add a few ruff lint rules: ASYNC, EXE, FA and LOG ([#6840](https://github.com/napari/napari/pull/6840)) +- Add extra field to store plugin display name ([#6841](https://github.com/napari/napari/pull/6841)) +- Add pytest-style rules for ruff ([#6842](https://github.com/napari/napari/pull/6842)) +- Enable ruff SLOT linting rule ([#6843](https://github.com/napari/napari/pull/6843)) +- [pre-commit.ci] pre-commit autoupdate ([#6844](https://github.com/napari/napari/pull/6844)) +- Define submenus with their actions, remove submenus.py file ([#6848](https://github.com/napari/napari/pull/6848)) +- Add T20 ruff rule (print calls) ([#6849](https://github.com/napari/napari/pull/6849)) +- Test dev examples ([#6854](https://github.com/napari/napari/pull/6854)) +- Check prereleases testing with macOS + Python 3.12 + PyQt6 ([#6858](https://github.com/napari/napari/pull/6858)) +- Update `dask`, `imageio`, `scikit-image`, `tifffile`, `virtualenv` ([#6861](https://github.com/napari/napari/pull/6861)) +- [pre-commit.ci] pre-commit autoupdate ([#6863](https://github.com/napari/napari/pull/6863)) +- Update `hypothesis`, `pytest`, `virtualenv`, bump mypy constraints and resolve pointed problems. ([#6866](https://github.com/napari/napari/pull/6866)) +- Fix compile constraints by compile per operating system and using `uv` ([#6873](https://github.com/napari/napari/pull/6873)) +- Fix benchmark reporting ([#6877](https://github.com/napari/napari/pull/6877)) +- Move help actions under `_qt` and remove lambdas ([#6883](https://github.com/napari/napari/pull/6883)) +- Fix citation cff and add worflow for future validation ([#6888](https://github.com/napari/napari/pull/6888)) +- Update `app-model`, `babel`, `coverage`, `dask`, `fsspec`, `hypothesis`, `jsonschema`, `lxml`, `matplotlib`, `psygnal`, `pygments`, `pytest`, `qtconsole`, `superqt`, `tensorstore`, `tifffile`, `tqdm`, `virtualenv`, `xarray`, `zarr` ([#6891](https://github.com/napari/napari/pull/6891)) +- Add longer description to pytest fail in `fail_obj_graph` ([#6899](https://github.com/napari/napari/pull/6899)) +- Migrate Window menu to app-model ([#6905](https://github.com/napari/napari/pull/6905)) +- [Maint] On PRs, dont run benchmarks unless initial tests pass ([#6909](https://github.com/napari/napari/pull/6909)) +- Fix `PIP_CONSTRAINT` to not crash python installation on macos arm and python 3.10 ([#6911](https://github.com/napari/napari/pull/6911)) +- Migrate Debug menu to app-model ([#6915](https://github.com/napari/napari/pull/6915)) +- remove error reporter code ([#6923](https://github.com/napari/napari/pull/6923)) +- MNT: Fix layerlist context creation ([#6926](https://github.com/napari/napari/pull/6926)) +- Automatically remove run-benchmarks label once benchmarks are executed ([#6929](https://github.com/napari/napari/pull/6929)) +- Use `superqt.utils.CodeSyntaxHighlight` instead of `napari._qt.code_syntax_highlight.Pylighter` ([#6938](https://github.com/napari/napari/pull/6938)) +- [pre-commit.ci] pre-commit autoupdate ([#6939](https://github.com/napari/napari/pull/6939)) +- Add a test for viewer.close_all. ([#6942](https://github.com/napari/napari/pull/6942)) +- Add more file menu actions tests ([#6943](https://github.com/napari/napari/pull/6943)) +- [Maint] Update docs constraints for new napari-sphinx-theme release ([#6947](https://github.com/napari/napari/pull/6947)) +- ci(dependabot): bump docker/login-action from 3.1.0 to 3.2.0 in the actions group ([#6951](https://github.com/napari/napari/pull/6951)) +- Update `certifi`, `dask`, `fsspec`, `hypothesis`, `ipython`, `magicgui`, `pint`, `pooch`, `pydantic`, `pytest`, `superqt` ([#6953](https://github.com/napari/napari/pull/6953)) +- Add some tests for view menu actions ([#6955](https://github.com/napari/napari/pull/6955)) +- [pre-commit.ci] pre-commit autoupdate ([#6956](https://github.com/napari/napari/pull/6956)) +- Add some tests for plugins menu actions ([#6962](https://github.com/napari/napari/pull/6962)) +- Add some tests for help menu actions ([#6963](https://github.com/napari/napari/pull/6963)) +- Add a test for window menu actions ([#6972](https://github.com/napari/napari/pull/6972)) +- [maint] Update docker-singularity-publish.yml to run on PR ([#6973](https://github.com/napari/napari/pull/6973)) +- More numpy 2.0 related fixes ([#6974](https://github.com/napari/napari/pull/6974)) +- Add some tests for debug menu actions and fix validation to create the menu ([#6975](https://github.com/napari/napari/pull/6975)) +- Remove redundant `NapariMenu` ([#6977](https://github.com/napari/napari/pull/6977)) +- Update `rename_argument` to use `FutureWarning` instead of `DeprecationWarning` ([#6980](https://github.com/napari/napari/pull/6980)) +- Add attributes to `DummyTimer` ([#6982](https://github.com/napari/napari/pull/6982)) +- Update `test_create_func_renamed` test to use `FutureWarning` instead of `DeprecationWarning` ([#6987](https://github.com/napari/napari/pull/6987)) +- restore numpy 2.0 constraints ([#6994](https://github.com/napari/napari/pull/6994)) +- Update `dask`, `hypothesis`, `numba`, `pydantic`, `tensorstore`, `vispy`, `xarray` ([#6995](https://github.com/napari/napari/pull/6995)) +- Make test log easier to read by removing `-v` from pytest call ([#6996](https://github.com/napari/napari/pull/6996)) +- Add tests for viewer scale bar attributes (`colored` and `ticks`) ([#7006](https://github.com/napari/napari/pull/7006)) +- Add tox-uv to test environment for speedup installation, fix codecov upload ([#7013](https://github.com/napari/napari/pull/7013)) +- Update CircleCI config.yml to not overwrite requirements ([docs#184](https://github.com/napari/docs/pull/184)) +- Update CI actions versions ([docs#213](https://github.com/napari/docs/pull/213)) +- [Maintenance] Use permissions for labeler action (and set v4) ([docs#247](https://github.com/napari/docs/pull/247)) +- [maintenance] Fix missing v in labeler action version ([docs#248](https://github.com/napari/docs/pull/248)) +- Use docs constraints in circleci workflow ([docs#251](https://github.com/napari/docs/pull/251)) +- Add missed pinning dependencies ([docs#260](https://github.com/napari/docs/pull/260)) +- [Maintenance] Update deploy_docs.yml to use constraints ([docs#263](https://github.com/napari/docs/pull/263)) +- [Maintenance] fix path to requirements.txt in deploy_docs workflow ([docs#264](https://github.com/napari/docs/pull/264)) +- Delete vestigial docs/requirements.txt ([docs#270](https://github.com/napari/docs/pull/270)) +- [Maint] use concurrency to cancel in-progress build_docs ([docs#277](https://github.com/napari/docs/pull/277)) +- [Maintenance] Update CIrcleCI redirector circleci.yml to fix artifact path ([docs#278](https://github.com/napari/docs/pull/278)) +- fix napari repo path to constraints ([docs#290](https://github.com/napari/docs/pull/290)) +- Update headless-gui action in build (fix screenshots) ([docs#294](https://github.com/napari/docs/pull/294)) +- Update .gitignore ([docs#300](https://github.com/napari/docs/pull/300)) +- Set `NAPARI_CONFIG` to clean settings ([docs#310](https://github.com/napari/docs/pull/310)) +- Unify docs workflows ([docs#348](https://github.com/napari/docs/pull/348)) +- For this repo, link contributions to documentation contribution guide ([docs#366](https://github.com/napari/docs/pull/366)) +- [Maint] fix the download and deploy part of workflow ([docs#380](https://github.com/napari/docs/pull/380)) +- [Maint] fix build_and_deploy.yml paths ([docs#384](https://github.com/napari/docs/pull/384)) +- fix build_and_deploy.yml take 2 ([docs#385](https://github.com/napari/docs/pull/385)) +- [maint] fix app-model intersphinx link ([docs#388](https://github.com/napari/docs/pull/388)) +- Fix make html-noplot command ([docs#394](https://github.com/napari/docs/pull/394)) +- [Maint] use lxml[html_clean] in requirements.txt ([docs#397](https://github.com/napari/docs/pull/397)) +- Add maintenance workflows from main repo (edit PR description/clean up ready to merge label) ([docs#406](https://github.com/napari/docs/pull/406)) +- Bump napari sphinx theme version ([docs#423](https://github.com/napari/docs/pull/423)) + + +## 43 authors added to this release (alphabetical) + +- [aeisenbarth](https://github.com/napari/napari/commits?author=aeisenbarth) - @aeisenbarth +- [Amirreza Aflakparast](https://github.com/napari/napari/commits?author=AmirAflak) - @AmirAflak +- [andrew sweet](https://github.com/napari/napari/commits?author=andy-sweet) - @andy-sweet +- [Ashley Anderson](https://github.com/napari/napari/commits?author=aganders3) - @aganders3 +- [Christopher Nauroth-Kreß](https://github.com/napari/napari/commits?author=Chris-N-K) - @Chris-N-K +- [Daniel Althviz Moré](https://github.com/napari/napari/commits?author=dalthviz) - @dalthviz +- [Daniel Zhang](https://github.com/napari/napari/commits?author=DanGonite57) - @DanGonite57 +- [David Paleček](https://github.com/napari/napari/commits?author=palec87) - @palec87 +- [David Pinto](https://github.com/napari/napari/commits?author=MarchisLost) - @MarchisLost +- [David Stansby](https://github.com/napari/napari/commits?author=dstansby) - @dstansby +- [Dr. Andrew Annex](https://github.com/napari/napari/commits?author=AndrewAnnex) - @AndrewAnnex +- [Draga Doncila Pop](https://github.com/napari/napari/commits?author=DragaDoncila) - @DragaDoncila +- [Eric Perlman](https://github.com/napari/napari/commits?author=perlman) - @perlman +- [Genevieve Buckley](https://github.com/napari/napari/commits?author=GenevieveBuckley) - @GenevieveBuckley +- [Gonzalo Peña-Castellanos](https://github.com/napari/napari/commits?author=goanpeca) - @goanpeca +- [Grzegorz Bokota](https://github.com/napari/napari/commits?author=Czaki) - @Czaki +- [jaime rodriguez-guerra](https://github.com/napari/napari/commits?author=jaimergp) - @jaimergp +- [James Ryan](https://github.com/napari/napari/commits?author=jamesyan-git) - @jamesyan-git +- [Jan Eglinger](https://github.com/napari/napari/commits?author=imagejan) - @imagejan +- [Johannes Soltwedel](https://github.com/napari/napari/commits?author=jo-mueller) - @jo-mueller +- [Jordão Bragantini](https://github.com/napari/napari/commits?author=JoOkuma) - @JoOkuma +- [Juan Nunez-Iglesias](https://github.com/napari/napari/commits?author=jni) - @jni +- [Jules Vanaret](https://github.com/napari/napari/commits?author=jules-vanaret) - @jules-vanaret +- [Kabilar Gunalan](https://github.com/napari/napari/commits?author=kabilar) - @kabilar +- [Kim Pevey](https://github.com/napari/napari/commits?author=kcpevey) - @kcpevey +- [Kira Evans](https://github.com/napari/napari/commits?author=kne42) - @kne42 +- [Konstantin Sofiiuk](https://github.com/napari/napari/commits?author=ksofiyuk) - @ksofiyuk +- [kyle i. s. harrington](https://github.com/napari/napari/commits?author=kephale) - @kephale +- [Lorenzo Gaifas](https://github.com/napari/napari/commits?author=brisvag) - @brisvag +- [Lucy Liu](https://github.com/napari/napari/commits?author=lucyleeow) - @lucyleeow +- [Lukasz Migas](https://github.com/napari/napari/commits?author=lukasz-migas) - @lukasz-migas +- [M Bussonnier](https://github.com/napari/napari/commits?author=Carreau) - @Carreau +- [Markus Stabrin](https://github.com/napari/napari/commits?author=mstabrin) - @mstabrin +- [Martin Weigert](https://github.com/napari/napari/commits?author=maweigert) - @maweigert +- [Melissa Weber Mendonça](https://github.com/napari/napari/commits?author=melissawm) - @melissawm +- [nadalyn miller](https://github.com/napari/napari/commits?author=Nadalyn-CZI) - @Nadalyn-CZI +- [odinsbane](https://github.com/napari/napari/commits?author=odinsbane) - @odinsbane +- [pam wadhwa](https://github.com/napari/napari/commits?author=ppwadhwa) - @ppwadhwa +- [Peter Sobolewski](https://github.com/napari/napari/commits?author=psobolewskiPhD) - @psobolewskiPhD +- [Sam Cunliffe](https://github.com/napari/napari/commits?author=samcunliffe) - @samcunliffe +- [Stefan van der Walt](https://github.com/napari/napari/commits?author=stefanv) - @stefanv +- [Talley Lambert](https://github.com/napari/napari/commits?author=tlambert03) - @tlambert03 +- [Wouter-Michiel Vierdag](https://github.com/napari/napari/commits?author=melonora) - @melonora + + +## 41 reviewers added to this release (alphabetical) + +- [alister burt](https://github.com/napari/napari/commits?author=alisterburt) - @alisterburt +- [andrew sweet](https://github.com/napari/napari/commits?author=andy-sweet) - @andy-sweet +- [Ashley Anderson](https://github.com/napari/napari/commits?author=aganders3) - @aganders3 +- [Daniel Althviz Moré](https://github.com/napari/napari/commits?author=dalthviz) - @dalthviz +- [David Paleček](https://github.com/napari/napari/commits?author=palec87) - @palec87 +- [David Stansby](https://github.com/napari/napari/commits?author=dstansby) - @dstansby +- [Dr. Andrew Annex](https://github.com/napari/napari/commits?author=AndrewAnnex) - @AndrewAnnex +- [Draga Doncila Pop](https://github.com/napari/napari/commits?author=DragaDoncila) - @DragaDoncila +- [Eric Perlman](https://github.com/napari/napari/commits?author=perlman) - @perlman +- [Ganes Pandey](https://github.com/napari/napari/commits?author=pganes) - @pganes +- [Genevieve Buckley](https://github.com/napari/napari/commits?author=GenevieveBuckley) - @GenevieveBuckley +- [Gonzalo Peña-Castellanos](https://github.com/napari/napari/commits?author=goanpeca) - @goanpeca +- [Grzegorz Bokota](https://github.com/napari/napari/commits?author=Czaki) - @Czaki +- [jaime rodriguez-guerra](https://github.com/napari/napari/commits?author=jaimergp) - @jaimergp +- [James Ryan](https://github.com/napari/napari/commits?author=jamesyan-git) - @jamesyan-git +- [Johannes Soltwedel](https://github.com/napari/napari/commits?author=jo-mueller) - @jo-mueller +- [Jordão Bragantini](https://github.com/napari/napari/commits?author=JoOkuma) - @JoOkuma +- [Juan Nunez-Iglesias](https://github.com/napari/napari/commits?author=jni) - @jni +- [Jules Vanaret](https://github.com/napari/napari/commits?author=jules-vanaret) - @jules-vanaret +- [Kabilar Gunalan](https://github.com/napari/napari/commits?author=kabilar) - @kabilar +- [Kandarp Khandwala](https://github.com/napari/napari/commits?author=kandarpksk) - @kandarpksk +- [Kevin Yamauchi](https://github.com/napari/napari/commits?author=kevinyamauchi) - @kevinyamauchi +- [Kim Pevey](https://github.com/napari/napari/commits?author=kcpevey) - @kcpevey +- [Kira Evans](https://github.com/napari/napari/commits?author=kne42) - @kne42 +- [Konstantin Sofiiuk](https://github.com/napari/napari/commits?author=ksofiyuk) - @ksofiyuk +- [kyle i. s. harrington](https://github.com/napari/napari/commits?author=kephale) - @kephale +- [Lorenzo Gaifas](https://github.com/napari/napari/commits?author=brisvag) - @brisvag +- [Lucy Liu](https://github.com/napari/napari/commits?author=lucyleeow) - @lucyleeow +- [M Bussonnier](https://github.com/napari/napari/commits?author=Carreau) - @Carreau +- [Markus Stabrin](https://github.com/napari/napari/commits?author=mstabrin) - @mstabrin +- [Martin Weigert](https://github.com/napari/napari/commits?author=maweigert) - @maweigert +- [Melissa Weber Mendonça](https://github.com/napari/napari/commits?author=melissawm) - @melissawm +- [Nathan Clack](https://github.com/napari/napari/commits?author=nclack) - @nclack +- [Nicholas Sofroniew](https://github.com/napari/napari/commits?author=sofroniewn) - @sofroniewn +- [odinsbane](https://github.com/napari/napari/commits?author=odinsbane) - @odinsbane +- [pam wadhwa](https://github.com/napari/napari/commits?author=ppwadhwa) - @ppwadhwa +- [Peter Sobolewski](https://github.com/napari/napari/commits?author=psobolewskiPhD) - @psobolewskiPhD +- [Stefan van der Walt](https://github.com/napari/napari/commits?author=stefanv) - @stefanv +- [Talley Lambert](https://github.com/napari/napari/commits?author=tlambert03) - @tlambert03 +- [Wouter-Michiel Vierdag](https://github.com/napari/napari/commits?author=melonora) - @melonora +- [Ziyang Liu](https://github.com/napari/napari/commits?author=liu-ziyang) - @liu-ziyang + + +## 18 docs authors added to this release (alphabetical) + +- [andrew sweet](https://github.com/napari/docs/commits?author=andy-sweet) - @andy-sweet +- [Ashley Anderson](https://github.com/napari/docs/commits?author=aganders3) - @aganders3 +- [Daniel Althviz Moré](https://github.com/napari/docs/commits?author=dalthviz) - @dalthviz +- [David Stansby](https://github.com/napari/docs/commits?author=dstansby) - @dstansby +- [Draga Doncila Pop](https://github.com/napari/docs/commits?author=DragaDoncila) - @DragaDoncila +- [Grzegorz Bokota](https://github.com/napari/docs/commits?author=Czaki) - @Czaki +- [jaime rodriguez-guerra](https://github.com/napari/docs/commits?author=jaimergp) - @jaimergp +- [James Ryan](https://github.com/napari/docs/commits?author=jamesyan-git) - @jamesyan-git +- [Juan Nunez-Iglesias](https://github.com/napari/docs/commits?author=jni) - @jni +- [Kabilar Gunalan](https://github.com/napari/docs/commits?author=kabilar) - @kabilar +- [Lorenzo Gaifas](https://github.com/napari/docs/commits?author=brisvag) - @brisvag +- [Lucy Liu](https://github.com/napari/docs/commits?author=lucyleeow) - @lucyleeow +- [Melissa Weber Mendonça](https://github.com/napari/docs/commits?author=melissawm) - @melissawm +- [niklas netter](https://github.com/napari/docs/commits?author=gatoniel) - @gatoniel +- [Peter Sobolewski](https://github.com/napari/docs/commits?author=psobolewskiPhD) - @psobolewskiPhD +- [Sean Martin](https://github.com/napari/docs/commits?author=seankmartin) - @seankmartin +- [Vince](https://github.com/napari/docs/commits?author=vreuter) - @vreuter +- [Wouter-Michiel Vierdag](https://github.com/napari/docs/commits?author=melonora) - @melonora + + +## 19 docs reviewers added to this release (alphabetical) + +- [alister burt](https://github.com/napari/docs/commits?author=alisterburt) - @alisterburt +- [andrew sweet](https://github.com/napari/docs/commits?author=andy-sweet) - @andy-sweet +- [Ashley Anderson](https://github.com/napari/docs/commits?author=aganders3) - @aganders3 +- [Daniel Althviz Moré](https://github.com/napari/docs/commits?author=dalthviz) - @dalthviz +- [Draga Doncila Pop](https://github.com/napari/docs/commits?author=DragaDoncila) - @DragaDoncila +- [Genevieve Buckley](https://github.com/napari/docs/commits?author=GenevieveBuckley) - @GenevieveBuckley +- [Grzegorz Bokota](https://github.com/napari/docs/commits?author=Czaki) - @Czaki +- [Juan Nunez-Iglesias](https://github.com/napari/docs/commits?author=jni) - @jni +- [Kevin Yamauchi](https://github.com/napari/docs/commits?author=kevinyamauchi) - @kevinyamauchi +- [kyle i. s. harrington](https://github.com/napari/docs/commits?author=kephale) - @kephale +- [Lorenzo Gaifas](https://github.com/napari/docs/commits?author=brisvag) - @brisvag +- [Lucy Liu](https://github.com/napari/docs/commits?author=lucyleeow) - @lucyleeow +- [Melissa Weber Mendonça](https://github.com/napari/docs/commits?author=melissawm) - @melissawm +- [nadalyn miller](https://github.com/napari/docs/commits?author=Nadalyn-CZI) - @Nadalyn-CZI +- [niklas netter](https://github.com/napari/docs/commits?author=gatoniel) - @gatoniel +- [Peter Sobolewski](https://github.com/napari/docs/commits?author=psobolewskiPhD) - @psobolewskiPhD +- [Sean Martin](https://github.com/napari/docs/commits?author=seankmartin) - @seankmartin +- [Vince](https://github.com/napari/docs/commits?author=vreuter) - @vreuter +- [Wouter-Michiel Vierdag](https://github.com/napari/docs/commits?author=melonora) - @melonora + +## New Contributors + +There are 11 new contributors for this release: + +- Amirreza Aflakparast [napari](https://github.com/napari/napari/commits?author=AmirAflak) - @AmirAflak +- Daniel Zhang [napari](https://github.com/napari/napari/commits?author=DanGonite57) - @DanGonite57 +- David Paleček [napari](https://github.com/napari/napari/commits?author=palec87) - @palec87 +- David Pinto [napari](https://github.com/napari/napari/commits?author=MarchisLost) - @MarchisLost +- Dr. Andrew Annex [napari](https://github.com/napari/napari/commits?author=AndrewAnnex) - @AndrewAnnex +- Johannes Soltwedel [napari](https://github.com/napari/napari/commits?author=jo-mueller) - @jo-mueller +- niklas netter [docs](https://github.com/napari/docs/commits?author=gatoniel) - @gatoniel +- odinsbane [napari](https://github.com/napari/napari/commits?author=odinsbane) - @odinsbane +- Sam Cunliffe [napari](https://github.com/napari/napari/commits?author=samcunliffe) - @samcunliffe +- Stefan van der Walt [napari](https://github.com/napari/napari/commits?author=stefanv) - @stefanv +- Vince [docs](https://github.com/napari/docs/commits?author=vreuter) - @vreuter