DESCRIPTION

Package: jointseg
Type: Package
Title: Joint Segmentation of Multivariate (Copy Number) Signals
Version: 1.0.2
Authors@R: c(person("Morgane", "Pierre-Jean", role = c("aut", "cre"), 
                     email = "mpierrejean.pro@gmail.com"),
              person("Pierre", "Neuvial", role = c("aut"),
                     email="pierre.neuvial@math.univ-toulouse.fr"),
              person("Guillem", "Rigaill", role = "aut"))
Description: Methods for fast segmentation of multivariate
    signals into piecewise constant profiles and for generating realistic
    copy-number profiles. A typical application is the joint segmentation of total
    DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism
    (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, 
    Rigaill and Neuvial (2015) <doi:10.1093/bib/bbu026>.
License: LGPL (>= 2.1)
Depends: R (>= 3.1.0)
Imports:
    acnr (>= 0.3.1),
    matrixStats (>= 0.6.0),
    DNAcopy
Suggests:
    PSCBS,
    R.cache,
    digest,
    changepoint (>= 1.0.2),
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: knitr
URL: https://github.com/mpierrejean/jointseg
RoxygenNote: 6.1.1
BugReports: https://github.com/mpierrejean/jointseg/issues