diff --git a/src/main/c/params.c b/src/main/c/params.c index b756158..f9de05c 100644 --- a/src/main/c/params.c +++ b/src/main/c/params.c @@ -66,8 +66,8 @@ void set_default_params(params* p) { p->min_source_homology_score = 30; p->filter_read_span = 35; p->filter_mate_span = 48; - p->eval_start = 50; - p->eval_stop = 390; + p->eval_start = 52; + p->eval_stop = 411; p->threads = 1; p->window_overlap_check_size = 320; } @@ -92,11 +92,12 @@ void usage() { fprintf(stderr, "\t--ins \n"); fprintf(stderr, "\t--rf \n"); + fprintf(stderr, "\t--vk \n"); fprintf(stderr, "\t--mrs \n"); fprintf(stderr, "\t--ms \n"); - fprintf(stderr, "\t--e0 \n"); - fprintf(stderr, "\t--e1 \n"); + fprintf(stderr, "\t--e0 \n"); + fprintf(stderr, "\t--e1 \n"); fprintf(stderr, "\t--wo \n"); }