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Example to extract time courses with labels from custom atlas #12618
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Hello! 👋 Thanks for opening your first pull request here! ❤️ We will try to get back to you soon. 🚴 |
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Looks great, thank 😄 ping me when you want a review, a couple of small points for now:
- Title should have as many
=
under and above as characters in the title - You can check the rendered docs in the
Check the render docs
workflow, for now here. - Prefer
pathlib.Path
overos.path.join()
to handle file/folder paths - Add a changelog entry by adding a file to this folder.
- This is raised at the moment:
FileNotFoundError: MRI image does not exist: "/home/circleci/mne_data/MNE-sample-data/subjects/sample/mri/yeo_atlasaseg.mgz"
… file existence to diagnose error, correct number of = around title
for more information, see https://pre-commit.ci
Replaces all os.path calls with posix Path Replaces all os.system calls with subprocess.run to fail on command failure.
for more information, see https://pre-commit.ci
…nto source_atlas_branch
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What does this implement/fix?
An example on how to extract time courses of source reconstructed data when using a custom parcellation atlas!
On suggestion by @mscheltienne
Additional information
None, really.