nc.yml

name: MODFLOW 6 continuous integration
on:
  push:
    branches:
      - nc_winbuild2
    paths-ignore:
      - '**.md'
      - '**.pdf'
      - '**.tex'
      - '**.jpg'
      - '**.jpeg'
      - '**.png'
      - '**.bbl'
      - '**.bib'
      - 'doc/**.dat'
      - 'doc/**.ipynb'
      - 'doc/**.py'
      - 'doc/**.sh'
      - 'doc/**.xlsx'
      - '.hpc/**'
  pull_request:
    branches:
      - master
      - develop
    paths-ignore:
      - '**.md'
      - '**.pdf'
      - '**.tex'
      - '**.jpg'
      - '**.jpeg'
      - '**.png'
      - '**.bbl'
      - '**.bib'
      - 'doc/**.dat'
      - 'doc/**.ipynb'
      - 'doc/**.py'
      - 'doc/**.sh'
      - 'doc/**.xlsx'
      - '.hpc/**'
concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true
env:
  PIXI_BETA_WARNING_OFF: true
jobs:
  lint:
    name: Check format
    runs-on: ubuntu-latest
    steps:

      - name: Checkout MF6
        uses: actions/checkout@v4

      - name: Setup pixi
        uses: prefix-dev/setup-pixi@v0.8.1
        with:
          pixi-version: v0.24.2

      - name: Check Fortran source formatting
        run: pixi run check-format

      - name: Check MSVS project files
        run: pixi run check-vfproj

      - name: Check python lint
        run: pixi run check-python-lint

      - name: Check python format
        run: pixi run check-python-format
      
      - name: Check CITATION.cff
        uses: dieghernan/cff-validator@v3

  netcdf_test:
    name: NetCDF executable testing
#    needs:
#      - lint
#      - build
#      - smoke_test
    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
#        os: [ ubuntu-22.04, macos-12, windows-2022 ]
        os: [ windows-2022 ]
    defaults:
      run:
        shell: bash

    steps:

      - name: Checkout MF6
        uses: actions/checkout@v4
        with:
          path: modflow6

      - name: Setup pixi
        uses: prefix-dev/setup-pixi@v0.8.1
        with:
          pixi-version: v0.24.2
          manifest-path: "modflow6/pixi.toml"

      - name: Custom pixi install
        working-directory: modflow6
        run: pixi run install

      - name: Install additional netcdf testing packages
        working-directory: modflow6
        run: pixi run pip install xugrid xarray netcdf4

      - name: Test extended MF6
        if: runner.os != 'Windows'
        uses: ./modflow6/.github/actions/test-extended

      - name: Test netcdf MF6 (Windows)
        if: runner.os == 'Windows'
        uses: ./modflow6/.github/actions/test-netcdf-win

      - name: Upload failed test output
        if: failure()
        uses: actions/upload-artifact@v4
        with:
          name: failed-${{ matrix.os }}
          path: modflow6/autotest/.failed