test.yml

name: Lint, test, build, and publish

on:
  push:


jobs:
  lint_and_test:
    name: Runs the linter and tests
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8, 3.9, '3.10', '3.11']

    steps:
      - uses: actions/checkout@v4
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}
      - name: Install dependencies and kraken
        run: |
          python -m pip install --upgrade pip
          pip install .[test] flake8
      - name: Lint with flake8
        run: |
          # stop the build if there are Python syntax errors or undefined names
          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
      - name: Run tests, except training tests
        run: |
          pytest -k 'not test_train'

  build-n-publish-pypi:
    name: Build and publish Python 🐍 distributions 📦 to PyPI and TestPyPI
    needs: lint_and_test
    runs-on: ubuntu-latest
    if: startsWith(github.ref, 'refs/tags/')

    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python 3.9
      uses: actions/setup-python@v5
      with:
        python-version: 3.9
    - name: Build a binary wheel and a source tarball
      run: |
        python -m pip install build --user
        python -m build --sdist --wheel --outdir dist/ .
    - name: Publish a Python distribution to PyPI
      uses: pypa/gh-action-pypi-publish@release/v1
      with:
        user: __token__
        password: ${{ secrets.PYPI_API_TOKEN }}
    - name: Upload PyPI artifacts to GH storage
      uses: actions/upload-artifact@v3
      with:
        name: pypi_packages
        path: dist/*

  build-n-publish-anaconda:
    name: Build and publish anaconda packages
    needs: lint_and_test
    runs-on: ubuntu-latest
    if: startsWith(github.ref, 'refs/tags/')

    steps:
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0
      - uses: conda-incubator/setup-miniconda@v3
        with:
          python-version: 3.9
          miniforge-variant: Mambaforge
      - name: install dependencies build
        shell: bash -l {0}
        run: mamba install colorama pip ruamel ruamel.yaml rich jsonschema conda-verify anaconda-client
      - name: Build linux-64 conda package
        uses: prefix-dev/rattler-build-action@v0.2.6
        with:
          recipe-path: "conda/recipe.yaml"
          build-args: "--experimental --target-platform linux-64"
      - name: Build osx-64 conda package
        uses: prefix-dev/rattler-build-action@v0.2.6
        with:
          recipe-path: "conda/recipe.yaml"
          build-args: "--experimental --target-platform osx-64"
#      - name: Build osx-arm64 conda package
#        uses: prefix-dev/rattler-build-action@v0.2.6
#        with:
#          recipe-path: "conda/recipe.yaml"
#          build-args: "--experimental --target-platform osx-arm64"
      - name: Upload conda package
        run: |
          for pkg in $(find output -type f \( -name "*.conda" -o -name "*.tar.bz2" \) ); do
            echo "Uploading ${pkg}"
            rattler-build upload anaconda -o mittagessen -a ${{ secrets.ANACONDA_TOKEN }} "${pkg}"
          done
      - name: Upload conda artifacts to GH storage
        uses: actions/upload-artifact@v4
        with:
          name: conda_packages
          path: output/*/*.conda

  autodraft-gh-release:
    name: Create github release
    needs: [build-n-publish-anaconda, build-n-publish-pypi]
    runs-on: ubuntu-latest

    steps:
      - uses: actions/download-artifact@v4
        with:
          name: conda_packages
          path: conda
      - uses: actions/download-artifact@v4
        with:
          name: pypi_packages
          path: pypi
      - uses: "marvinpinto/action-automatic-releases@latest"
        with:
          repo_token: "${{ secrets.GITHUB_TOKEN }}"
          prerelease: false
          draft: true
          files: |
            output/*/*.conda
            pypi/*

  publish-gh-pages:
    name: Update kraken.re github pages
    needs: lint_and_test
    runs-on: ubuntu-latest
    if: |
      github.ref == 'refs/heads/main' ||
      startsWith(github.ref, 'refs/tags/')

    steps:
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0
      - name: Set up Python 3.9
        uses: actions/setup-python@v5
        with:
          python-version: 3.9
      - name: Install sphinx-multiversion
        run:  python -m pip install sphinx-multiversion sphinx-autoapi
      - name: Create docs
        run:  sphinx-multiversion docs build/html
      - name: Create redirect
        run: cp docs/redirect.html build/html/index.html
      - name: Push gh-pages
        uses: crazy-max/ghaction-github-pages@v3
        with:
          target_branch: gh-pages
          build_dir: build/html
          fqdn: kraken.re
          jekyll: false
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}