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I'm using MToolBox v1.2, and when I tested on the /test/sim_data that came with the download the software, I got the following error. I saw this error has come up in earlier posts but don't find a solution to it. Anyone has suggestions? Thank you!
MToolBox.sh -i test_config.sh &> sim_data_run.log
ASSEMBLING MT GENOMES WITH ASSEMBLEMTGENOME...
WARNING: values of tail < 5 are deprecated and will be replaced with 5
Human genome indices do not exist. Run samtools faidx fist.
GENERATING VCF OUTPUT...
Traceback (most recent call last):
File "/mnt/research/statgen/mitoAnalyzer/MToolBox-master/MToolBox/VCFoutput.py", line 36, in
VCF_dict = ast.literal_eval(open('VCF_dict_tmp', 'r').read())
IOError: [Errno 2] No such file or directory: 'VCF_dict_tmp'
The text was updated successfully, but these errors were encountered:
I'm using MToolBox v1.2, and when I tested on the /test/sim_data that came with the download the software, I got the following error. I saw this error has come up in earlier posts but don't find a solution to it. Anyone has suggestions? Thank you!
MToolBox.sh -i test_config.sh &> sim_data_run.log
ASSEMBLING MT GENOMES WITH ASSEMBLEMTGENOME...
WARNING: values of tail < 5 are deprecated and will be replaced with 5
Human genome indices do not exist. Run samtools faidx fist.
GENERATING VCF OUTPUT...
Traceback (most recent call last):
File "/mnt/research/statgen/mitoAnalyzer/MToolBox-master/MToolBox/VCFoutput.py", line 36, in
VCF_dict = ast.literal_eval(open('VCF_dict_tmp', 'r').read())
IOError: [Errno 2] No such file or directory: 'VCF_dict_tmp'
The text was updated successfully, but these errors were encountered: