diff --git a/DESCRIPTION b/DESCRIPTION
index 3fa3135..80885e1 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
Package: DQAstats
Title: Core Functions for Data Quality Assessment
-Version: 0.3.5
-Date: 2024-06-05
+Version: 0.3.6
+Date: 2024-11-27
Authors@R: c(
person("Lorenz A.", "Kapsner", , "lorenz.kapsner@gmail.com", role = c("cre", "aut"),
comment = c(ORCID = "0000-0003-1866-860X")),
@@ -45,4 +45,4 @@ Encoding: UTF-8
Roxygen: list(markdown = TRUE)
SystemRequirements: Quarto command line tools
(https://github.com/quarto-dev/quarto-cli).
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
diff --git a/NAMESPACE b/NAMESPACE
index 745f96f..5775219 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -4,7 +4,6 @@ export(atemp_plausi_results)
export(check_date_restriction_requirements)
export(completeness)
export(create_helper_vars)
-export(create_markdown)
export(create_pdf_report)
export(data_loading)
export(descriptive_results)
diff --git a/NEWS.md b/NEWS.md
index 4a16ff1..851a232 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -2,503 +2,536 @@
# DQAstats NEWS
-## Unreleased (2024-06-04)
+## Unreleased (2024-11-27)
+
+#### Bug fixes
+
+- first try to fix issue with vignette on macosx cran runners
+ ([c590870](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c590870da6de4293dc16d15e263338dddac91379))
+
+#### Other changes
+
+- updated news, descr and readme
+ ([cc70346](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/cc70346db9d92f572e37545def5d66982997e9f3))
+- merged development into trino
+ ([6c7e592](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6c7e592240273f2c18a8c7b09dbb81eece651a08))
+- merged fix-quarto-pdf into trino
+ ([0d4b012](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/0d4b012a750425c24da7f350f90a3014cf40392e))
+- cleaning up
+ ([a5bcbed](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a5bcbedbe566ca566e9749985dc098b19e4d3402))
+- updated desc and news md, fixed typo
+ ([919018f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/919018f4d90f0b8bcbeef62b6f42b8dd5cd0c951))
+- merged fix for quarto pdf
+ ([6aaae8d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6aaae8dac4584e7e1affaa9c5e875bceccec31cf))
+- fix pdf generation with quarto
+ ([3cc3ab4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3cc3ab4b57ab23e90d96c2141918855fb90b6ce5))
+- removed deprecated function create_markdown
+ ([4c9c47d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4c9c47d86189002587da0fbdf13a77573ebd0551))
+- updated gitignore
+ ([e53ad68](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e53ad68ea2218f7a598cf1e30da753ff60406a8a))
+
+Full set of changes:
+[`v0.3.5...cc70346`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.5...cc70346)
+
+## v0.3.5 (2024-06-05)
#### New features
- moving pdf-creation to quarto
- ([5391f1b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5391f1b580d438e33098d4c3625ab1d67fadc5e5))
+ ([5391f1b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5391f1b580d438e33098d4c3625ab1d67fadc5e5))
#### Bug fixes
- fixed issue with copying of final pdf-report
- ([008dc28](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/008dc28a2df4bc8a4f067a28a2ea0e1e436e88a6))
+ ([008dc28](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/008dc28a2df4bc8a4f067a28a2ea0e1e436e88a6))
- specifing min required version for quarto
- ([9cc7a55](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9cc7a555dfe21396ce76530f25aa103e788ef0fe))
+ ([9cc7a55](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9cc7a555dfe21396ce76530f25aa103e788ef0fe))
- updated code; moved template rmd to qmd
- ([b9a7530](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b9a7530d6c21d1d86eddb84d93f4ce1f152b7591))
+ ([b9a7530](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b9a7530d6c21d1d86eddb84d93f4ce1f152b7591))
- rmd file
- ([ae4f067](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ae4f06740799745ac7f39cc0863bddbc06bfbfbd))
+ ([ae4f067](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ae4f06740799745ac7f39cc0863bddbc06bfbfbd))
- no more filter error
- ([34a9bc4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/34a9bc4769d52d0216d7efe753494ddd7fc94278))
+ ([34a9bc4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/34a9bc4769d52d0216d7efe753494ddd7fc94278))
- fixed dplyr residual stuff
- ([8f390a5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8f390a58c13e23d7a48f203904f988a67bac8099))
+ ([8f390a5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8f390a58c13e23d7a48f203904f988a67bac8099))
- fixed error in time_compare
- ([83ba875](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/83ba8757b8f1c9eb267ebf47acace4c146b673ba))
+ ([83ba875](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/83ba8757b8f1c9eb267ebf47acace4c146b673ba))
- fixed utils::head declaration
- ([c0febd0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c0febd0fee6f576110655cc703ebee593d96c031))
+ ([c0febd0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c0febd0fee6f576110655cc703ebee593d96c031))
- convert Date to character, update Readme
- ([3789f66](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3789f664f5a5cffe5372ca71f5d2a066857f3e30))
+ ([3789f66](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3789f664f5a5cffe5372ca71f5d2a066857f3e30))
#### Tests
- remove checking for md/tex
- ([5f997e5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5f997e533b17ec40c2ea52c26aa4402a345e3252))
+ ([5f997e5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5f997e533b17ec40c2ea52c26aa4402a345e3252))
- fixed unit tests
- ([10209f4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/10209f4d37a5cc4893e0395cda4668bbc7ed3899))
+ ([10209f4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/10209f4d37a5cc4893e0395cda4668bbc7ed3899))
#### CI
- fixing pandoc issue in windows
- ([ca7756f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ca7756f8b6b50d64627857de9f6160b844828fc3))
+ ([ca7756f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ca7756f8b6b50d64627857de9f6160b844828fc3))
- moving to quarto in gha
- ([01c0adb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/01c0adb42aa980843080604eac6000ce970b2f91))
+ ([01c0adb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/01c0adb42aa980843080604eac6000ce970b2f91))
- installing bable-german
- ([4b01a85](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4b01a85411a9354156a6345160a6812471b0c716))
+ ([4b01a85](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4b01a85411a9354156a6345160a6812471b0c716))
- trying to fix rchecks
- ([da91f32](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/da91f321fcbb805b74ab47c54828382fc4abf50d))
+ ([da91f32](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/da91f321fcbb805b74ab47c54828382fc4abf50d))
- trying to fix latex issue
- ([f3e7e1b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f3e7e1b96f9729220f33bac81c31c17903a102b6))
+ ([f3e7e1b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f3e7e1b96f9729220f33bac81c31c17903a102b6))
- try java 11
- ([a77379c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a77379cf46775f46997fd139cf756256cba8b145))
+ ([a77379c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a77379cf46775f46997fd139cf756256cba8b145))
- try microsoft dist
- ([bd54153](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bd54153ed9a2687d6e2375a65eb9f48c0667d2e0))
+ ([bd54153](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bd54153ed9a2687d6e2375a65eb9f48c0667d2e0))
- added distribution to java config
- ([d5957d7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d5957d75be547840bbd2f014b73992a6d3bb6ddf))
+ ([d5957d7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d5957d75be547840bbd2f014b73992a6d3bb6ddf))
- minor fixes to get files working
- ([c1f3b9e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c1f3b9e5e29414190c2572c82dc0ac2941ac987b))
+ ([c1f3b9e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c1f3b9e5e29414190c2572c82dc0ac2941ac987b))
- fix github actions
- ([d239468](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d23946896152c5ad39a0dca51b0da83b54912bb8))
+ ([d239468](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d23946896152c5ad39a0dca51b0da83b54912bb8))
#### Other changes
+- prepared cran-update
+ ([c2c33db](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c2c33db5c67db6932701cc686c518b39f11023ed))
- reverted rv_list to rv again
- ([f44a854](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f44a854c6b7e70ee23eb6baadde6ed55422c67b7))
+ ([f44a854](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f44a854c6b7e70ee23eb6baadde6ed55422c67b7))
- removed as.list(rv) again
- ([017bb49](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/017bb49ecdd01d60015137119c2612a6a90213a7))
+ ([017bb49](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/017bb49ecdd01d60015137119c2612a6a90213a7))
- changed report-generation
- ([ac07d40](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ac07d40f1145015051873ca08a0ea1590839b101))
+ ([ac07d40](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ac07d40f1145015051873ca08a0ea1590839b101))
- merged both branches
- ([7aa766f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7aa766f0bf62f42c4e47ddcff775bfec74b42af6))
+ ([7aa766f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7aa766f0bf62f42c4e47ddcff775bfec74b42af6))
- fixed errors
- ([8702985](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/870298524d5437a8896c128204acb85948e873ed))
+ ([8702985](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/870298524d5437a8896c128204acb85948e873ed))
- re-introduced missing pdf-copying
- ([4f6a7d5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4f6a7d52c78b005a9bf0d2ebbb6e5c4f4562807f))
+ ([4f6a7d5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4f6a7d52c78b005a9bf0d2ebbb6e5c4f4562807f))
- fixed all changes that have not been merged before
- ([d370e06](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d370e069d0c0cc1795ec54955a46aad24f9af27b))
+ ([d370e06](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d370e069d0c0cc1795ec54955a46aad24f9af27b))
- added latest enhancements from dev-branch
- ([55b011b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/55b011b27c8535f82f3fbecd89529b728ae15452))
+ ([55b011b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/55b011b27c8535f82f3fbecd89529b728ae15452))
- updated dev-stuffs
- ([50f0b51](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/50f0b517ca23937c2eef21a249dc7a5c0af2961d))
+ ([50f0b51](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/50f0b517ca23937c2eef21a249dc7a5c0af2961d))
- updated tests
- ([546ad57](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/546ad5769dc6b43b0764bf5ec6d2bb8fe1ac82ac))
+ ([546ad57](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/546ad5769dc6b43b0764bf5ec6d2bb8fe1ac82ac))
- merged latest developments into colored_diff_summary
- ([41da740](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/41da7405fa2fc981afe30d00c350a37c81cfcf69))
+ ([41da740](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/41da7405fa2fc981afe30d00c350a37c81cfcf69))
- moved vignette engine to quarto
- ([87defba](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/87defbae5715a2124638743b23ee3f87dcdd5b5d))
+ ([87defba](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/87defbae5715a2124638743b23ee3f87dcdd5b5d))
- renamed create_markdown to create_pdf_report
- ([dd26b08](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/dd26b08b0839ea6e2da1cf00c04239ddd7821a24))
+ ([dd26b08](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/dd26b08b0839ea6e2da1cf00c04239ddd7821a24))
- updated automated generation of readme
- ([9b286bc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9b286bc2e8b7385097d79dc64583346511858df6))
+ ([9b286bc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9b286bc2e8b7385097d79dc64583346511858df6))
- added dqa-dqastats.wiki to ignore
- ([3a80262](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3a802627a211e634da214241c4cbb0166857a70d))
+ ([3a80262](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3a802627a211e634da214241c4cbb0166857a70d))
- updated desc and news.md
- ([e0678bb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e0678bbdd334e547a9fc1f1c739af0a38fdb41ef))
+ ([e0678bb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e0678bbdd334e547a9fc1f1c739af0a38fdb41ef))
- merged fixed ci into tc branch
- ([090cd16](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/090cd16e92eee0b0ed185f4c75dbd518342691fc))
+ ([090cd16](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/090cd16e92eee0b0ed185f4c75dbd518342691fc))
- merged latest changes into time_compare
- ([1e57f52](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1e57f52d0ad675d410dba61229b64dc7b6418178))
+ ([1e57f52](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1e57f52d0ad675d410dba61229b64dc7b6418178))
- get_timestamp_items to separate function
- ([f59557a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f59557a50e440f30c6810b97d572331c74ea7646))
+ ([f59557a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f59557a50e440f30c6810b97d572331c74ea7646))
- started with review
- ([57a201a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/57a201a228401c3921a5917777e2136e34f612c4))
+ ([57a201a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/57a201a228401c3921a5917777e2136e34f612c4))
- prep new dev-version
- ([d1f2610](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d1f2610048a79b42b0a5036e12b25f87e3976d14))
+ ([d1f2610](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d1f2610048a79b42b0a5036e12b25f87e3976d14))
Full set of changes:
-[`v0.3.4...008dc28`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.3.4...008dc28)
+[`v0.3.4...v0.3.5`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.4...v0.3.5)
## v0.3.4 (2024-04-04)
#### Bug fixes
- fixed issues in vignette
- ([f67cb85](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f67cb85adf7493893a5530c2140122509819a544))
+ ([f67cb85](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f67cb85adf7493893a5530c2140122509819a544))
- fixed vignette also for windows
- ([76b45d5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/76b45d563e015a43f80727562a89a9006cb50b37))
+ ([76b45d5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/76b45d563e015a43f80727562a89a9006cb50b37))
- using last working version of dataquier datasets
- ([b30f7b0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b30f7b011072d02ccbf42988f616facac843ec3c))
+ ([b30f7b0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b30f7b011072d02ccbf42988f616facac843ec3c))
#### CI
- updated checkout tags for github actions
- ([3470aeb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3470aeb45d20d190127ec6865bba924fe07dc42e))
+ ([3470aeb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3470aeb45d20d190127ec6865bba924fe07dc42e))
#### Other changes
- updated news.md
- ([3fa8fc4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3fa8fc4d77edc032da78439ac5cc961a31f2654a))
+ ([3fa8fc4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3fa8fc4d77edc032da78439ac5cc961a31f2654a))
- updated cran-comments
- ([e7faf98](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e7faf98fd5278d98b09abc07e6c8bee396fe0f14))
+ ([e7faf98](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e7faf98fd5278d98b09abc07e6c8bee396fe0f14))
- updated rocker image tag to `rocker/verse:4.3.2`
- ([f7cdf21](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f7cdf211b020ca7aa83e783262041584e253ad6f))
+ ([f7cdf21](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f7cdf211b020ca7aa83e783262041584e253ad6f))
- updated to latest changes
- ([19a048c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/19a048c339232783b3507202f68872733cd8c9ed))
+ ([19a048c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/19a048c339232783b3507202f68872733cd8c9ed))
- merged latest changes
- ([1580fd1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1580fd12f2ef9a8fa8ec14ed0bb3a5b8aabaa01b))
+ ([1580fd1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1580fd12f2ef9a8fa8ec14ed0bb3a5b8aabaa01b))
Full set of changes:
-[`v0.3.3...v0.3.4`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.3.3...v0.3.4)
+[`v0.3.3...v0.3.4`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.3...v0.3.4)
## v0.3.3 (2023-07-20)
#### Bug fixes
- set eval=FALSE for vignette on windows
- ([502dcfb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/502dcfbc4f86f54a534300adefd83e6abd39fdaf))
+ ([502dcfb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/502dcfbc4f86f54a534300adefd83e6abd39fdaf))
- solving cran issues
- ([b1344f3](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b1344f32799b8b70a6813e940f64e84b1ccc3cf4))
+ ([b1344f3](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b1344f32799b8b70a6813e940f64e84b1ccc3cf4))
- hot-fix to resolve cran errors
- ([482ea46](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/482ea46623666f2a5fb1a0ff2c6394e1fb40d6e4))
+ ([482ea46](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/482ea46623666f2a5fb1a0ff2c6394e1fb40d6e4))
- checking of empty restricting_date_format
- ([a847ba2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a847ba201c002acecb5bfd118034e243529fa929))
+ ([a847ba2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a847ba201c002acecb5bfd118034e243529fa929))
- fixed typo
- ([5490bf4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5490bf4d2df09135ef85198337681d24def2b04f))
+ ([5490bf4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5490bf4d2df09135ef85198337681d24def2b04f))
- working on getting dates fixed for oracle
- ([e3345cc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e3345cc9c92c3507abf2c51001986e974868f3cf))
+ ([e3345cc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e3345cc9c92c3507abf2c51001986e974868f3cf))
- date-formatting for oracle
- ([4398f89](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4398f89a14422328ac08545012f1b5f4b0574e34))
+ ([4398f89](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4398f89a14422328ac08545012f1b5f4b0574e34))
- replace as also for no time filtering
- ([d5a2444](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d5a24444b358a3ccb4bfeb3cff3f233177252994))
+ ([d5a2444](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d5a24444b358a3ccb4bfeb3cff3f233177252994))
#### Docs
- switched to building man pages with markdown
- ([fc16321](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fc1632195474eb128abdeba4eb5ccd5d3c674e82))
+ ([fc16321](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fc1632195474eb128abdeba4eb5ccd5d3c674e82))
#### Other changes
- updated news.md
- ([dbb16cb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/dbb16cb29c084281ebc73494792ca51eb4dff095))
+ ([dbb16cb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/dbb16cb29c084281ebc73494792ca51eb4dff095))
- updated dev-version
- ([91a749c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/91a749cf1232b86af3d499c60b3cbb06dfe68618))
+ ([91a749c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/91a749cf1232b86af3d499c60b3cbb06dfe68618))
Full set of changes:
-[`v0.3.2...v0.3.3`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.3.2...v0.3.3)
+[`v0.3.2...v0.3.3`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.2...v0.3.3)
## v0.3.2 (2023-01-23)
#### New features
- do not read sqls from file if loaded elsewhere
- ([e3e799b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e3e799b7a3d653c909330653f4f8640f0f19785f))
+ ([e3e799b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e3e799b7a3d653c909330653f4f8640f0f19785f))
#### Refactorings
- sql date restrictions now use between
- ([5d492c1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5d492c174b1fc0a4129c23ccad573075ce79790d))
+ ([5d492c1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5d492c174b1fc0a4129c23ccad573075ce79790d))
- namespace imports to zzz.r
- ([8d8354f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8d8354f5f741b37685353305e3114a26b3ee8f71))
+ ([8d8354f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8d8354f5f741b37685353305e3114a26b3ee8f71))
#### CI
- fixed unit tests
- ([04c53cc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/04c53cce99f791766baddf98ad3137aa0e669006))
+ ([04c53cc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/04c53cce99f791766baddf98ad3137aa0e669006))
- fixed errors
- ([9396a7d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9396a7d7c6cceb55375b827e42425d417e8312c1))
+ ([9396a7d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9396a7d7c6cceb55375b827e42425d417e8312c1))
- fixing github actions with tic
- ([6c7ae2f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6c7ae2f3796f7ff87a4f4cd408a20a598a262829))
+ ([6c7ae2f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6c7ae2f3796f7ff87a4f4cd408a20a598a262829))
- fixing gha (wip)
- ([9dcbc32](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9dcbc3278c29501c9b16b3fccd492574afba9fc8))
+ ([9dcbc32](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9dcbc3278c29501c9b16b3fccd492574afba9fc8))
- removed gitlab-ci in favor of github actions
- ([2527c90](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2527c9027823b4ada66d7899a168366f9f3d46d2))
+ ([2527c90](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2527c9027823b4ada66d7899a168366f9f3d46d2))
- added deps for devtools
- ([92c63df](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/92c63df265ef8d2a4a09a5c8c9e47df41d6b385b))
+ ([92c63df](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/92c63df265ef8d2a4a09a5c8c9e47df41d6b385b))
#### Other changes
- updated cran errors url
- ([763a983](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/763a983548b52a2ef63d453c9f8f6f35315493cd))
+ ([763a983](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/763a983548b52a2ef63d453c9f8f6f35315493cd))
- updated description and news.md
- ([567fce8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/567fce8d4e8d300d5079aded2532d63b9866a15c))
+ ([567fce8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/567fce8d4e8d300d5079aded2532d63b9866a15c))
- updated news.md
- ([9c1fde0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9c1fde02a9613bf8d8e53e50f28af22af93a0b56))
+ ([9c1fde0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9c1fde02a9613bf8d8e53e50f28af22af93a0b56))
- updated news.md
- ([b44da32](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b44da32ad6e55b03325758688e4b3b95d2656f00))
+ ([b44da32](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b44da32ad6e55b03325758688e4b3b95d2656f00))
- better logging messages to understand origin of sql statements
- ([fa8c4e2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fa8c4e2c955b642ccb390cc37d2762976f671069))
+ ([fa8c4e2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fa8c4e2c955b642ccb390cc37d2762976f671069))
- updated rbuildignore
- ([77a1e9c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/77a1e9c318e8046412c9c45373d0dbd9a208fb8c))
+ ([77a1e9c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/77a1e9c318e8046412c9c45373d0dbd9a208fb8c))
- updated news.md
- ([7bb425d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7bb425d4951f7e6c155e9d7d3b8f880e9b60f480))
+ ([7bb425d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7bb425d4951f7e6c155e9d7d3b8f880e9b60f480))
- news.md now with autonewsmd package
- ([025d3b9](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/025d3b942ccd8e1cb5ce1c407e915cfe06825a4e))
+ ([025d3b9](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/025d3b942ccd8e1cb5ce1c407e915cfe06825a4e))
- updated descr
- ([4130add](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4130adde7eae47622b9829f47ed7ad60b9201102))
+ ([4130add](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4130adde7eae47622b9829f47ed7ad60b9201102))
Full set of changes:
-[`v0.3.1...v0.3.2`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.3.1...v0.3.2)
+[`v0.3.1...v0.3.2`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.1...v0.3.2)
## v0.3.1 (2022-06-27)
#### Bug fixes
- fixed wrong calculation of target-completness; closes #50
- ([60830d5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/60830d5abb67ea03e03af0c6ee76e28ae4498f87))
+ ([60830d5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/60830d5abb67ea03e03af0c6ee76e28ae4498f87))
- fixed checking if plausibility checks are possible with subset of
data elements
- ([e7c9320](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e7c9320ce5fdced437a7d467533f0c8b73e78697))
+ ([e7c9320](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e7c9320ce5fdced437a7d467533f0c8b73e78697))
- json-object to character for storing in pl-list
- ([683a355](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/683a3551337f2d6578afe9d9213e276facfcedf3))
+ ([683a355](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/683a3551337f2d6578afe9d9213e276facfcedf3))
#### Refactorings
- failing if info from mdr is lacking for plausibilities
- ([fc1d40c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fc1d40c9b1ae753aa55035ebddf663ea7777d465))
+ ([fc1d40c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fc1d40c9b1ae753aa55035ebddf663ea7777d465))
#### Build
- dizutils dependency to 0.1.1
- ([bb20c6d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bb20c6dd4b5a3fba8f2574f58204dd8c8a4ec2f7))
+ ([bb20c6d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bb20c6dd4b5a3fba8f2574f58204dd8c8a4ec2f7))
#### Tests
- new unit tests for datetime-restriction
- ([876a026](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/876a0267842e910ec4b8ba183fccfa8dc88aaa23))
+ ([876a026](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/876a0267842e910ec4b8ba183fccfa8dc88aaa23))
- added missing lintr dependency to suggests
- ([ee98ebc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ee98ebc265b52a6e2583d2c3075d55ae7bc9508a))
+ ([ee98ebc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ee98ebc265b52a6e2583d2c3075d55ae7bc9508a))
- added linting tests
- ([89df2c7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/89df2c7e4335137e930073386414fadcfff49ad4))
+ ([89df2c7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/89df2c7e4335137e930073386414fadcfff49ad4))
#### CI
- updated gha 2
- ([9e3da23](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9e3da23ee00970c7c68070520e22651c27fcb058))
+ ([9e3da23](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9e3da23ee00970c7c68070520e22651c27fcb058))
- updated gha
- ([8972407](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8972407a09d803a3f95a25ec252841ece2b3780d))
+ ([8972407](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8972407a09d803a3f95a25ec252841ece2b3780d))
#### Other changes
- updated lintr
- ([f95d2de](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f95d2dee793633d5b104b6667d1436e3f1bbedd7))
+ ([f95d2de](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f95d2dee793633d5b104b6667d1436e3f1bbedd7))
- preparing next cran-release
- ([ae09c62](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ae09c627343e37be004ed1a08a033abf424bb502))
+ ([ae09c62](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ae09c627343e37be004ed1a08a033abf424bb502))
- added demo sitename.json
- ([69a9706](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/69a9706a88f9652cd1c3463be935935b5e4e68b3))
+ ([69a9706](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/69a9706a88f9652cd1c3463be935935b5e4e68b3))
- replaced “data system” with “database”
- ([60655cd](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/60655cd410dfa33043e5d57a605d25d774bec663))
+ ([60655cd](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/60655cd410dfa33043e5d57a605d25d774bec663))
- updated description
- ([d85e4f6](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d85e4f603dde1549a154171cb615dc4dfe791e3f))
+ ([d85e4f6](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d85e4f603dde1549a154171cb615dc4dfe791e3f))
- making json prettier
- ([0498fee](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/0498fee83d3ca5285a9d88ef69abfc152041ef2d))
+ ([0498fee](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/0498fee83d3ca5285a9d88ef69abfc152041ef2d))
- updating description and news.md
- ([3fa87cb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3fa87cbf2fed96fb67f17a84809503ccd47b67c4))
+ ([3fa87cb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3fa87cbf2fed96fb67f17a84809503ccd47b67c4))
Full set of changes:
-[`v0.3.0...v0.3.1`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.3.0...v0.3.1)
+[`v0.3.0...v0.3.1`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.3.0...v0.3.1)
## v0.3.0 (2022-05-19)
#### New features
- added logo
- ([fb697c1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fb697c172f7a7561171a4fb28f147488d51fbe2e))
+ ([fb697c1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fb697c172f7a7561171a4fb28f147488d51fbe2e))
- ‘no data available’ now available for conformance checks
- ([94279d7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/94279d7ffd38eff58ce06d3ed53a431f74eacf91))
+ ([94279d7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/94279d7ffd38eff58ce06d3ed53a431f74eacf91))
- added creation of temporal view to sql display
- ([58f8775](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/58f8775ae6340e65eb36597486f7631ee0411c69))
+ ([58f8775](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/58f8775ae6340e65eb36597486f7631ee0411c69))
- more flexibility to use read_mdr
- ([c96a30c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c96a30cb4c2da26a04d3c3cc99ae6e511152d2c0))
+ ([c96a30c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c96a30cb4c2da26a04d3c3cc99ae6e511152d2c0))
- now returning modified sql statements for pdf / gui-button
- ([152bd52](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/152bd52d2378b377e38f3c75393c0e781505d14b))
+ ([152bd52](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/152bd52d2378b377e38f3c75393c0e781505d14b))
- added new constraints functionality for datetime variables
- ([04f8cf3](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/04f8cf30de50e9e766b3f23f024bc8e78081184b))
+ ([04f8cf3](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/04f8cf30de50e9e766b3f23f024bc8e78081184b))
- adding functionality for datetime constraints (wip)
- ([9752969](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9752969e11189fd6618e18af585022bc1ef5b171))
+ ([9752969](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9752969e11189fd6618e18af585022bc1ef5b171))
#### Bug fixes
- fixed rendering of report when datetime future checks present
- ([a427c4a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a427c4a1e6d031bf1ec179e44d9ade7bb7a6ca04))
+ ([a427c4a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a427c4a1e6d031bf1ec179e44d9ade7bb7a6ca04))
- error with diztools::is.empty
- ([867d659](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/867d659c5169524b7088eeceffc22895412efa98))
+ ([867d659](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/867d659c5169524b7088eeceffc22895412efa98))
- fixed displaying of conformance results, when no data available to
perform conformance checks
- ([73eae27](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/73eae2713e92147a33f0551060ffe18503965842))
+ ([73eae27](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/73eae2713e92147a33f0551060ffe18503965842))
- fixed recognition of empty data for datetime variables
- ([e8f6c4f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e8f6c4fdf086997c060909dc9cedb459ffca4f52))
+ ([e8f6c4f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e8f6c4fdf086997c060909dc9cedb459ffca4f52))
- fixed missing of view creation / deletion in displayed sqls
- ([895d9b0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/895d9b07c88856a70dccab03766f3bede3d216e1))
+ ([895d9b0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/895d9b07c88856a70dccab03766f3bede3d216e1))
- fixed issues when source_table_name included where-clause
- ([e4dc982](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e4dc98243bd67a9ba10adc7c9caa0ce05c8921b6))
+ ([e4dc982](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e4dc98243bd67a9ba10adc7c9caa0ce05c8921b6))
- only the first sql showed the view-creation sql. This is now fixed.
- ([b69c716](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b69c71634c85a80b3db0e3a7464ec3ddf2e55644))
+ ([b69c716](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b69c71634c85a80b3db0e3a7464ec3ddf2e55644))
- added all view creations to display-sql where only the last one was
- ([0310356](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/03103563646566f07d1c1c6c03ec317ddcb0f0f6))
+ ([0310356](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/03103563646566f07d1c1c6c03ec317ddcb0f0f6))
- corrected hierarchy of outlist list to transform variables 2
- ([22b5c16](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/22b5c161ab4f602ba9cf89c77451e28eaf353c54))
+ ([22b5c16](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/22b5c161ab4f602ba9cf89c77451e28eaf353c54))
- corrected hierarchy of outlist list to transform variables
- ([090e7e4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/090e7e49eef510b481b532659463ecae2c7486ac))
+ ([090e7e4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/090e7e49eef510b481b532659463ecae2c7486ac))
- replaced wrong argument to future::plan: ‘worker’ to ‘workers’
- ([b8a4e32](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b8a4e32e29d78b998e2c93f6602fa7c0167c2af6))
+ ([b8a4e32](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b8a4e32e29d78b998e2c93f6602fa7c0167c2af6))
- fixed errors in vignette
- ([74c8e0c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/74c8e0cd74f44fb9e6a86e8ef9e7f512ba62517e))
+ ([74c8e0c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/74c8e0cd74f44fb9e6a86e8ef9e7f512ba62517e))
- better error handling for parallel backend
- ([94727be](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/94727be6002082c71b736dfcbd66dbde68c351df))
+ ([94727be](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/94727be6002082c71b736dfcbd66dbde68c351df))
- added on.exit for future plan
- ([5b4113b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5b4113b460834958f21e04afe8e4d13e45b06ec8))
+ ([5b4113b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5b4113b460834958f21e04afe8e4d13e45b06ec8))
- parallel=FALSE by default
- ([d11943b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d11943b5c95709c12ff1ad7cfa833f6c7dc4ae1d))
+ ([d11943b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d11943b5c95709c12ff1ad7cfa833f6c7dc4ae1d))
- sql statements to target system, if source=target
- ([9f71b7f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9f71b7f175c83131fe67973da69c83ed70886c17))
+ ([9f71b7f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9f71b7f175c83131fe67973da69c83ed70886c17))
#### Refactorings
- formating value conformance results for reuse in dqagui
- ([a1e0f97](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a1e0f974a9645a330b67cee7fd64b45d9dd8a2e4))
+ ([a1e0f97](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a1e0f974a9645a330b67cee7fd64b45d9dd8a2e4))
- improved detection of missing datetime data
- ([b6d78ad](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b6d78adecde3a7cd72083d048499416ba30197ac))
+ ([b6d78ad](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b6d78adecde3a7cd72083d048499416ba30197ac))
- added ‘no data available’ category for etl checks
- ([23c6632](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/23c6632afc9eb200b7f627ab86015b7db5967f42))
+ ([23c6632](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/23c6632afc9eb200b7f627ab86015b7db5967f42))
- enhanced formatting of displayed sqls
- ([6b10231](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6b1023165d89211e05e3100308a3729916dbbf39))
+ ([6b10231](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6b1023165d89211e05e3100308a3729916dbbf39))
#### Tests
- removed contexts
- ([64377bf](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/64377bf9423b813d4f4a95944f337f2d8c3cc029))
+ ([64377bf](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/64377bf9423b813d4f4a95944f337f2d8c3cc029))
- fixed unittest for new mdr
- ([5884ddc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5884ddce6a2d8a02f3183247ca182bd11c9613f3))
+ ([5884ddc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5884ddce6a2d8a02f3183247ca182bd11c9613f3))
#### Docs
- replace missing definition with informatino
- ([ffa1e7b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ffa1e7b7446103c8e61cb55a19895011073aecdc))
+ ([ffa1e7b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ffa1e7b7446103c8e61cb55a19895011073aecdc))
- removed dataquier as soft dependency; now loading datasets directly
from url in vignette
- ([bad2da4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bad2da4d6487bec70a86e34bcc3a22b22a121f77))
+ ([bad2da4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bad2da4d6487bec70a86e34bcc3a22b22a121f77))
- added wiki-page for gui to vignette
- ([f4339c8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f4339c8fa82179d01fa23a273968e391f20d1422))
+ ([f4339c8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f4339c8fa82179d01fa23a273968e391f20d1422))
- fixed wrong paths in vignette
- ([4c18db2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4c18db259e1c9984daf7bda4334612e9f8f6a80e))
+ ([4c18db2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4c18db259e1c9984daf7bda4334612e9f8f6a80e))
- update vignette
- ([767a677](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/767a6777dc82715b28acc0350d0a8dad27ceadef))
+ ([767a677](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/767a6777dc82715b28acc0350d0a8dad27ceadef))
- adding vignette that analyzes dataquier ship-dataset
- ([b92d55a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b92d55a8fe8f2f21446ae9b9fe80d329922ebb8e))
+ ([b92d55a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b92d55a8fe8f2f21446ae9b9fe80d329922ebb8e))
#### Other changes
- preparing new cran release v0.3.0
- ([288a429](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/288a42953876e970e46f7c1c429f8b9ac3b66c1f))
+ ([288a429](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/288a42953876e970e46f7c1c429f8b9ac3b66c1f))
- updated description / news.md
- ([b097bcb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b097bcba809f4151e7ca7807a2e51430a4baa437))
+ ([b097bcb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b097bcba809f4151e7ca7807a2e51430a4baa437))
- removed unnecessary paste
- ([85c3866](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/85c38660ecbed1a72c0a8105e2b9a48b4caf170a))
+ ([85c3866](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/85c38660ecbed1a72c0a8105e2b9a48b4caf170a))
- updated version, news.md, etc.
- ([603897e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/603897e75b72575737139f61c4704d933cf11578))
+ ([603897e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/603897e75b72575737139f61c4704d933cf11578))
- added linebreake after sql-where
- ([15921fc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/15921fc6eff5cd1e7d34e97f9bba73c0b2ec1dc5))
+ ([15921fc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/15921fc6eff5cd1e7d34e97f9bba73c0b2ec1dc5))
- function create_markdown to extra file
- ([4e565f0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4e565f0fff752c30507e3cdcdd12fd2a90359d2d))
+ ([4e565f0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4e565f0fff752c30507e3cdcdd12fd2a90359d2d))
- updated news.md
- ([c8dae31](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c8dae312d837f04ce3e1844783b795e22306add5))
+ ([c8dae31](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c8dae312d837f04ce3e1844783b795e22306add5))
- updated news.md
- ([1e17de9](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1e17de931084e6ee8c1a23c53ad983fc0a3091fc))
+ ([1e17de9](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1e17de931084e6ee8c1a23c53ad983fc0a3091fc))
- added diztools version to logging
- ([6d94f8e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6d94f8effc3b0e04dfa0e09a48e778243b51c616))
+ ([6d94f8e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6d94f8effc3b0e04dfa0e09a48e778243b51c616))
- updated package metadata and news.md
- ([3402dc7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3402dc787ac446cc6e2afa2d58ac017727a57100))
+ ([3402dc7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3402dc787ac446cc6e2afa2d58ac017727a57100))
- updated news.md
- ([f76c07c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f76c07c748f5746bec9a1f0eee6f625bc643207c))
+ ([f76c07c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f76c07c748f5746bec9a1f0eee6f625bc643207c))
- updated news.md; fixed git config to work with auto-changelog again
- ([e9bbed7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e9bbed7b7a08ddeaca7706c7299550dfc4f14178))
+ ([e9bbed7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e9bbed7b7a08ddeaca7706c7299550dfc4f14178))
- update debugging.info
- ([90d2f32](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/90d2f32cdf2badcf3bda01fd27cb390b95140962))
+ ([90d2f32](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/90d2f32cdf2badcf3bda01fd27cb390b95140962))
- updated debugging info
- ([6b4917c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6b4917c6900e36bd0133ce628e925a8ace24701e))
+ ([6b4917c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6b4917c6900e36bd0133ce628e925a8ace24701e))
- removed comments from display sql
- ([ce0dd47](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ce0dd47c74b32095904f73ff9a0067c214351886))
+ ([ce0dd47](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ce0dd47c74b32095904f73ff9a0067c214351886))
- merged development
- ([fc09efc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fc09efcf583f2f1c6a6ebfd100055400927ae9b8))
+ ([fc09efc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fc09efcf583f2f1c6a6ebfd100055400927ae9b8))
- extened SQL hints in display message
- ([23d8d9d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/23d8d9d7199789e733a87543d2a7a0332a24c1d2))
+ ([23d8d9d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/23d8d9d7199789e733a87543d2a7a0332a24c1d2))
- updated news.md
- ([8c24f8a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8c24f8aebb30a90d21586310940df182434454c6))
+ ([8c24f8a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8c24f8aebb30a90d21586310940df182434454c6))
- updated news.md
- ([8ebda0a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8ebda0a52baa0667b52f855c594daef4f42a1eec))
+ ([8ebda0a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8ebda0a52baa0667b52f855c594daef4f42a1eec))
- updated news
- ([d7bbbe6](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d7bbbe670f7b70e7090acf2b50458052702c0b07))
+ ([d7bbbe6](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d7bbbe670f7b70e7090acf2b50458052702c0b07))
- added feedback msg to error
- ([ba13828](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ba13828057dd1f8246586eb344ce0e491c27a318))
+ ([ba13828](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ba13828057dd1f8246586eb344ce0e491c27a318))
- updated cran comments
- ([e179ddd](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e179ddd3be76028a7e6a4cc7f852729bb7ecaa82))
+ ([e179ddd](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e179ddd3be76028a7e6a4cc7f852729bb7ecaa82))
- added unname after ncores
- ([9b9ab35](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9b9ab35dc4fd0823dcd0947cd164b55b1e9fbca9))
+ ([9b9ab35](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9b9ab35dc4fd0823dcd0947cd164b55b1e9fbca9))
- outscourced dqagui deployment to dqagui
- ([1aa545b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1aa545b4d1a9c85114f22ac9e5d3118bca05b13b))
+ ([1aa545b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1aa545b4d1a9c85114f22ac9e5d3118bca05b13b))
- added dqastats and dqagui docker-compse files
- ([4215868](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/421586829a561c4414b8490c00443321152b1402))
+ ([4215868](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/421586829a561c4414b8490c00443321152b1402))
- added dqagui image deployment
- ([ef5c249](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ef5c2493685ef4fe24c6c6bf7b73ca1bf7f99498))
+ ([ef5c249](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ef5c2493685ef4fe24c6c6bf7b73ca1bf7f99498))
- fixed typo in vignette
- ([1f00aa1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1f00aa191d18edfe4335b44e18c6fda5badd4131))
+ ([1f00aa1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1f00aa191d18edfe4335b44e18c6fda5badd4131))
- updated news.md
- ([4098434](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/409843444f1f08341736e2f54d06a4f6b7a5b0f8))
+ ([4098434](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/409843444f1f08341736e2f54d06a4f6b7a5b0f8))
- fixed localhost url in vignette
- ([55c9210](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/55c9210f4b03b6c24589187e9aafb0c0abb7f0be))
+ ([55c9210](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/55c9210f4b03b6c24589187e9aafb0c0abb7f0be))
- removed unnecessary columns from example mdr
- ([3579cd6](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3579cd61c0aecefef7db6033da82128917abee94))
+ ([3579cd6](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3579cd61c0aecefef7db6033da82128917abee94))
Full set of changes:
-[`v0.2.6...v0.3.0`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.6...v0.3.0)
+[`v0.2.6...v0.3.0`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.6...v0.3.0)
## v0.2.6 (2022-03-02)
#### Bug fixes
- renaming data.table columns when modified by sql
- ([708fd4c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/708fd4c58f3b837ca86488e7045151c2793546d2))
+ ([708fd4c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/708fd4c58f3b837ca86488e7045151c2793546d2))
#### Other changes
- updated news.md
- ([de0b617](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/de0b617131cf4abb6fdaaaf473df25920ef8d71b))
+ ([de0b617](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/de0b617131cf4abb6fdaaaf473df25920ef8d71b))
- updated version; news.md
- ([156c08a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/156c08af623be54d46783c791a6155113d0db7aa))
+ ([156c08a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/156c08af623be54d46783c791a6155113d0db7aa))
- added error message to agrepl command
- ([60f8c8a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/60f8c8a3fe0ff6f70bbd440e9e2a8ef22c1128ac))
+ ([60f8c8a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/60f8c8a3fe0ff6f70bbd440e9e2a8ef22c1128ac))
- updated readme to comply with diztools/dizutils
- ([948c5d1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/948c5d14acf5a865f668668913fb37d279026987))
+ ([948c5d1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/948c5d14acf5a865f668668913fb37d279026987))
- updated readme to comply with diztools
- ([aa85f3c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/aa85f3c7208dc1dbdbe7e4f6fb90d9049031338f))
+ ([aa85f3c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/aa85f3c7208dc1dbdbe7e4f6fb90d9049031338f))
- removed gitlab badges from readme
- ([384b017](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/384b01727728e74c4dabe79ce1313d4f63cef028))
+ ([384b017](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/384b01727728e74c4dabe79ce1313d4f63cef028))
Full set of changes:
-[`v0.2.5...v0.2.6`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.5...v0.2.6)
+[`v0.2.5...v0.2.6`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.5...v0.2.6)
## v0.2.5 (2022-02-21)
#### Refactorings
- switch to diztools dependency
- ([9a6794c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9a6794cf5f86c8e560f63b93ffe833fcf70d2b2a))
+ ([9a6794c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9a6794cf5f86c8e560f63b93ffe833fcf70d2b2a))
#### Other changes
- updated dizutils version
- ([1ab17f1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1ab17f181f3d48bad9ca414b7e253caf8179f95e))
+ ([1ab17f1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1ab17f181f3d48bad9ca414b7e253caf8179f95e))
Full set of changes:
-[`v0.2.4...v0.2.5`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.4...v0.2.5)
+[`v0.2.4...v0.2.5`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.4...v0.2.5)
## v0.2.4 (2022-02-11)
#### Other changes
- preparing cran update
- ([269ad14](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/269ad142e9e725908fa98a464a1c988e6b78a42b))
+ ([269ad14](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/269ad142e9e725908fa98a464a1c988e6b78a42b))
- updated news.md, adaptions to new diztools/dizutils
- ([c038c44](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c038c4478cb0f201350253bc3c9e379a1b3d1121))
+ ([c038c44](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c038c4478cb0f201350253bc3c9e379a1b3d1121))
- updated news.md and description
- ([f6b315f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f6b315f668dc250bb267511e95301bcd27b8b015))
+ ([f6b315f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f6b315f668dc250bb267511e95301bcd27b8b015))
- some revisions to file path handling to avoid warnings
- ([6b57449](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6b574492dffa102a3b61a306e7ee0e99f863e7a3))
+ ([6b57449](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6b574492dffa102a3b61a306e7ee0e99f863e7a3))
- updated news.md
- ([90725c2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/90725c273e108b581187091f7af6c9ecd0896db9))
+ ([90725c2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/90725c273e108b581187091f7af6c9ecd0896db9))
Full set of changes:
-[`v0.2.3...v0.2.4`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.3...v0.2.4)
+[`v0.2.3...v0.2.4`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.3...v0.2.4)
## v0.2.3 (2022-02-04)
@@ -506,467 +539,467 @@ Full set of changes:
- added datamap variables; updated tests accordingly; added unique
plausi check irregularity
- ([cf384a6](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/cf384a6550071bb8b3a0844a0d04a3c99f9672d4))
+ ([cf384a6](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/cf384a6550071bb8b3a0844a0d04a3c99f9672d4))
- updated docker image
- ([15c18a8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/15c18a8bf313034700de639e8d952bba65c01530))
+ ([15c18a8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/15c18a8bf313034700de639e8d952bba65c01530))
- added demo `email.yml` file
- ([907cd24](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/907cd24fd65490dc336b7019bafd9970de69f3e9))
+ ([907cd24](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/907cd24fd65490dc336b7019bafd9970de69f3e9))
- removed e1071 dependency; expect value_set to be array
- ([ebfa59b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ebfa59ba620a3c3afe7e50be1c967e1b468ce226))
+ ([ebfa59b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ebfa59ba620a3c3afe7e50be1c967e1b468ce226))
#### Bug fixes
- fallback in csv path extraction to handed over variable
- ([5dee04e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5dee04e2a947b8c0c96bd0c2a9353683c1d14fc5))
+ ([5dee04e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5dee04e2a947b8c0c96bd0c2a9353683c1d14fc5))
#### Tests
- deleting logfiles after each test
- ([123c172](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/123c17253fbe13b96085c1c843e14404e2ecb4f7))
+ ([123c172](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/123c17253fbe13b96085c1c843e14404e2ecb4f7))
- adapt checks to MDR columns
- ([31562c8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/31562c82b06f4f4644f649167e8f5b897d1d17bc))
+ ([31562c8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/31562c82b06f4f4644f649167e8f5b897d1d17bc))
#### Docs
- updated documentation
- ([59f51ac](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/59f51ac578adb138c1233d0f6b423e9478bbe3fb))
+ ([59f51ac](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/59f51ac578adb138c1233d0f6b423e9478bbe3fb))
- updated readme
- ([00402d2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/00402d2ff03bb6fea471eaa664d427d6754b874e))
+ ([00402d2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/00402d2ff03bb6fea471eaa664d427d6754b874e))
- restructured files and docs
- ([083442d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/083442de70b2d08d41f24ea4b8d8feb5a6a97b38))
+ ([083442d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/083442de70b2d08d41f24ea4b8d8feb5a6a97b38))
- updated `NEWS.md`
- ([06f8e91](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/06f8e913602d929bb712055a4091142828fcbf59))
+ ([06f8e91](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/06f8e913602d929bb712055a4091142828fcbf59))
#### Other changes
- wrap examples into dont-test due to long runtime on cran
- ([a588fa3](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a588fa35aeabfd0f33914ecc1a49b80c41a45fcf))
+ ([a588fa3](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a588fa35aeabfd0f33914ecc1a49b80c41a45fcf))
- updated rbuildignore, gitignore, news.md
- ([2f478eb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2f478eb3bca29ab12940188c35822d42a15d5a14))
+ ([2f478eb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2f478eb3bca29ab12940188c35822d42a15d5a14))
- updated description and news.md
- ([cf545bb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/cf545bb8a034c47b82f9bc5e34935bb353ee51c8))
+ ([cf545bb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/cf545bb8a034c47b82f9bc5e34935bb353ee51c8))
- updated version for cran submission
- ([9b19b3e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9b19b3e1f199d49e56b5e06841507dd90084ffe2))
+ ([9b19b3e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9b19b3e1f199d49e56b5e06841507dd90084ffe2))
- updated news.md; .rbuildignore
- ([a3e9060](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a3e90600537a69adc9ce14830b9ee6460adb7a35))
+ ([a3e9060](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a3e90600537a69adc9ce14830b9ee6460adb7a35))
- updated date range in license statements
- ([b10d53b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b10d53b0fab173bc0dac45e77529dcf7ee03522d))
+ ([b10d53b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b10d53b0fab173bc0dac45e77529dcf7ee03522d))
- added env var content to logging msg
- ([936c5b4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/936c5b43cc1b1547f9d14007e15e5a01fefb61f6))
+ ([936c5b4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/936c5b43cc1b1547f9d14007e15e5a01fefb61f6))
- re-added roxygennote
- ([50b616f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/50b616f91a2b56ff6ed38ca4bb058181182a4a2c))
+ ([50b616f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/50b616f91a2b56ff6ed38ca4bb058181182a4a2c))
- updated url in readme
- ([535df53](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/535df539f7207f70dc118b918b8641df8e5d3edc))
+ ([535df53](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/535df539f7207f70dc118b918b8641df8e5d3edc))
- removed print-statement from datetime_restrictions
- ([e48d477](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e48d4778ae88ca44172a3004b3a3084f3183c3b8))
+ ([e48d477](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e48d4778ae88ca44172a3004b3a3084f3183c3b8))
- updated MDR and example data
- ([6c8a4f4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6c8a4f49ef96cbbf61a89ede49f2243b1c9ede80))
+ ([6c8a4f4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6c8a4f49ef96cbbf61a89ede49f2243b1c9ede80))
- repair codecov badge
- ([a9ad523](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a9ad523f85d0a71e38114039d371b68b5bd9703d))
+ ([a9ad523](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a9ad523f85d0a71e38114039d371b68b5bd9703d))
- fixed wrong formatting of markdown in readme.md badges section
- ([80afe85](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/80afe85fe9098b8ea12c0f4084e6b0394075e609))
+ ([80afe85](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/80afe85fe9098b8ea12c0f4084e6b0394075e609))
- removed html comments
- ([2e36321](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2e36321c093c25cb15bf8989132acfb9697d4c66))
+ ([2e36321](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2e36321c093c25cb15bf8989132acfb9697d4c66))
- reactivated cran-badges in readme.md
- ([5055a0a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5055a0a48498b272488b600e47783ef4aac35d9a))
+ ([5055a0a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5055a0a48498b272488b600e47783ef4aac35d9a))
Full set of changes:
-[`v0.2.2...v0.2.3`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.2...v0.2.3)
+[`v0.2.2...v0.2.3`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.2...v0.2.3)
## v0.2.2 (2022-01-12)
#### Bug fixes
- merging origin/development
- ([bd79108](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bd791085c718c8746f6f47b29c677da9dea5848c))
+ ([bd79108](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bd791085c718c8746f6f47b29c677da9dea5848c))
#### Refactorings
- updated K8s manifest and docs
- ([0026dfc](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/0026dfce5a988e9a27f0d34f2c93b3841652f2a4))
+ ([0026dfc](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/0026dfce5a988e9a27f0d34f2c93b3841652f2a4))
#### Tests
- fix failing cran checks due to failing unit tests in rdevel
- ([676bfcb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/676bfcbe41d2f06068f073b021873c0c2e340f7f))
+ ([676bfcb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/676bfcbe41d2f06068f073b021873c0c2e340f7f))
#### Docs
- added @chgl / @christian.gulden to thanks
- ([4c1dddf](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4c1dddf4da9ffe4d21ffed600e1e6976685bbedc))
+ ([4c1dddf](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4c1dddf4da9ffe4d21ffed600e1e6976685bbedc))
- updated k8s docs
- ([947c0a6](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/947c0a6f403568bdca00d52bbbe0c7fc37715305))
+ ([947c0a6](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/947c0a6f403568bdca00d52bbbe0c7fc37715305))
#### Other changes
- updated news.md
- ([177aaf5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/177aaf59b16489aa1b722f09df1500f90bff5595))
+ ([177aaf5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/177aaf59b16489aa1b722f09df1500f90bff5595))
- cran-submission to rbuildignore
- ([f288671](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f288671ae43158cf5aeb4e233b183ae86aa74e62))
+ ([f288671](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f288671ae43158cf5aeb4e233b183ae86aa74e62))
Full set of changes:
-[`v0.2.1...v0.2.2`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.1...v0.2.2)
+[`v0.2.1...v0.2.2`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.1...v0.2.2)
## v0.2.1 (2022-01-04)
#### New features
- added script to run testdata
- ([9a347df](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9a347df1341e090bccc40cf12754501a1e331a89))
+ ([9a347df](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9a347df1341e090bccc40cf12754501a1e331a89))
- added kubernetes manifest
- ([f0ca10a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f0ca10a7956dc4dbdc0d420304484ff79a6ba1fd))
+ ([f0ca10a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f0ca10a7956dc4dbdc0d420304484ff79a6ba1fd))
#### Bug fixes
- will not fail when tinytex is missing
- ([7d6748d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7d6748deb432f8e584e0491ce408ceb4a3cc8210))
+ ([7d6748d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7d6748deb432f8e584e0491ce408ceb4a3cc8210))
- removed tinytex-installation from report.r due to cran policy
violation
- ([79c7a87](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/79c7a87c60e3fe027cb7390b1fe934c5b75bd5ea))
+ ([79c7a87](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/79c7a87c60e3fe027cb7390b1fe934c5b75bd5ea))
#### Docs
- cran-installation to readme
- ([05785d0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/05785d049d6082962971526ea6b934f4926f5f6a))
+ ([05785d0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/05785d049d6082962971526ea6b934f4926f5f6a))
#### Other changes
- updated news.md
- ([a38d63b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a38d63bf7e0996fae8c3394dd699200112ef36d1))
+ ([a38d63b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a38d63bf7e0996fae8c3394dd699200112ef36d1))
- fixed typo in rbuildignore
- ([fd782e8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fd782e896759ed67a7d2b21cf7794ea8b9b01e47))
+ ([fd782e8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fd782e896759ed67a7d2b21cf7794ea8b9b01e47))
- updated `news.md`
- ([8931b2c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8931b2c91f38a302a9bdd0f9574a924a37055b46))
+ ([8931b2c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8931b2c91f38a302a9bdd0f9574a924a37055b46))
- detailed error message for `tinytex`
- ([b956b76](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b956b765a33c646bb85b01ed86b87b507c5f1766))
+ ([b956b76](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b956b765a33c646bb85b01ed86b87b507c5f1766))
- updated news.md
- ([5d78080](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5d780803e926548e73bce4fcc86fbba689bbf424))
+ ([5d78080](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5d780803e926548e73bce4fcc86fbba689bbf424))
- allow news.md in .gitignore and add to .Rbuildignore
- ([e469966](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e469966750c3a3598248662e85767c7c3d9f6f72))
+ ([e469966](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e469966750c3a3598248662e85767c7c3d9f6f72))
- added creation of news.md to devstuffs.R
- ([6f551b8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6f551b8f149b791ec9805ec229e3a377d36e78a0))
+ ([6f551b8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6f551b8f149b791ec9805ec229e3a377d36e78a0))
Full set of changes:
-[`v0.2.0...v0.2.1`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.2.0...v0.2.1)
+[`v0.2.0...v0.2.1`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.2.0...v0.2.1)
## v0.2.0 (2022-01-03)
#### New features
- new possibility for time constraints using sql modifications
- ([933bcf3](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/933bcf3b696c9a8a8d94c258395f7ec0c3e16a22))
+ ([933bcf3](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/933bcf3b696c9a8a8d94c258395f7ec0c3e16a22))
- added build script and docker images
- ([21bbe79](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/21bbe79a39b49bd54ec456e4ee828c9e632978a5))
+ ([21bbe79](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/21bbe79a39b49bd54ec456e4ee828c9e632978a5))
- switched to rocker-verse with included latex
- ([b4abb96](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b4abb9677e3da395a12b7ee265d54588a564c59c))
+ ([b4abb96](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b4abb9677e3da395a12b7ee265d54588a564c59c))
- added demo-dockerfile and dc
- ([97f2f85](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/97f2f85e6f39f48eb7b1045f273fe49667a76e5b))
+ ([97f2f85](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/97f2f85e6f39f48eb7b1045f273fe49667a76e5b))
- added `run_once` function for container runs
- ([f762009](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f762009b1e58005b221434c4f6f44c304ad4f9f3))
+ ([f762009](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f762009b1e58005b221434c4f6f44c304ad4f9f3))
- added `run_once.R` file for one-shot-container-runs
- ([7c7ac8c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7c7ac8c7c15ba8e42d37f04375c9ae2defdbab64))
+ ([7c7ac8c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7c7ac8c7c15ba8e42d37f04375c9ae2defdbab64))
#### Bug fixes
- added `xcolor` to latex deps to avoid latex crashing in the image
- ([961958a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/961958a67b7f199a6b02085b7f0bc3faa5909570))
+ ([961958a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/961958a67b7f199a6b02085b7f0bc3faa5909570))
- build script image tagging fixed
- ([8dabd0d](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8dabd0d96ae062d5e8c85378168c1cacff4c4496))
+ ([8dabd0d](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8dabd0d96ae062d5e8c85378168c1cacff4c4496))
- moved `run_once` file to the right folder
- ([1f6b5a1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1f6b5a16262eb781c53b77db4a80222d6b1f7afa))
+ ([1f6b5a1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1f6b5a16262eb781c53b77db4a80222d6b1f7afa))
#### Docs
- added hints for rocker/verse to readme
- ([fcc95c2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fcc95c2930c5e872f9972f7de9925d0bb1645371))
+ ([fcc95c2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fcc95c2930c5e872f9972f7de9925d0bb1645371))
- updated readme
- ([8f09194](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8f091942798ee869a4d229f186fc4baf13caa342))
+ ([8f09194](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8f091942798ee869a4d229f186fc4baf13caa342))
#### Other changes
- updated image and added renovate
- ([b8463b1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b8463b12c28f787a81789e2c11f5d4e430b7c9a5))
+ ([b8463b1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b8463b12c28f787a81789e2c11f5d4e430b7c9a5))
- added printing of current versions to dqa function
- ([206f39c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/206f39c358adb4be0fb4bdd7eef517a7401441bb))
+ ([206f39c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/206f39c358adb4be0fb4bdd7eef517a7401441bb))
- added tinitex dependency
- ([f85cf43](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f85cf43b19c180dfeeb1e3ea4406ea16db7b97fc))
+ ([f85cf43](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f85cf43b19c180dfeeb1e3ea4406ea16db7b97fc))
- switched to dev version of miracumdqa
- ([d465cae](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d465cae103e3a64663c451af3dbd54fc8a364b44))
+ ([d465cae](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d465cae103e3a64663c451af3dbd54fc8a364b44))
- fixed intendation in readme
- ([cf23a26](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/cf23a26ae08ceefbefc2bac9d8689007b0d6aaf4))
+ ([cf23a26](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/cf23a26ae08ceefbefc2bac9d8689007b0d6aaf4))
- added miracumdqa and docs
- ([bdc42b0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bdc42b05740a3704dd2e97c2383bda9644105312))
+ ([bdc42b0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bdc42b05740a3704dd2e97c2383bda9644105312))
- added tinytex packages to dockerfile
- ([88f78d4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/88f78d48010a5e8d85e9681e94e9b63351aff4a3))
+ ([88f78d4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/88f78d48010a5e8d85e9681e94e9b63351aff4a3))
- switched to variables in docker compose
- ([0352144](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/03521446c10f0c5019bbbbd2fc6efb7f37f6a0f2))
+ ([0352144](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/03521446c10f0c5019bbbbd2fc6efb7f37f6a0f2))
- catched fromjson error
- ([0a96b58](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/0a96b58719a5f05834c9dd4a5c35f0fdec5beaf5))
+ ([0a96b58](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/0a96b58719a5f05834c9dd4a5c35f0fdec5beaf5))
- added logmessages
- ([1bed01a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1bed01adfc551dad578f092359cff7b6ba2a1a3a))
+ ([1bed01a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1bed01adfc551dad578f092359cff7b6ba2a1a3a))
- removed `run_once()` function
- ([8bfe9e5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8bfe9e584f0713c098b62133dcd36c2642a9237b))
+ ([8bfe9e5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8bfe9e584f0713c098b62133dcd36c2642a9237b))
Full set of changes:
-[`v0.1.7...v0.2.0`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.7...v0.2.0)
+[`v0.1.7...v0.2.0`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.7...v0.2.0)
## v0.1.7 (2021-07-01)
#### New features
- new release
- ([b60d779](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b60d779154936db5fd416b5a530a73295698dce8))
+ ([b60d779](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b60d779154936db5fd416b5a530a73295698dce8))
- added uniqueness and atemporal plausibility checks
- ([ff37132](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/ff371327855f738682b829d802b90baeee122589))
+ ([ff37132](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/ff371327855f738682b829d802b90baeee122589))
- integrated support for non-timestamp columns for time-filtering
- ([2608a86](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2608a861943c7ebdcc357bb3343c2d89358bd7bf))
+ ([2608a86](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2608a861943c7ebdcc357bb3343c2d89358bd7bf))
- integrated temporal filtering
- ([3692da9](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/3692da9684ce6be208f7e2efd9637ce38317ade4))
+ ([3692da9](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/3692da9684ce6be208f7e2efd9637ce38317ade4))
- added time filtering function for databases
- ([2da4a6f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2da4a6ff9b66422043de3b32776a98dea2f0b468))
+ ([2da4a6f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2da4a6ff9b66422043de3b32776a98dea2f0b468))
- added time-filtering for csv files
- ([591c720](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/591c720e4f2c63bb644567a2ce5a58b478b6dfd4))
+ ([591c720](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/591c720e4f2c63bb644567a2ce5a58b478b6dfd4))
#### Bug fixes
- report display if no datamap variable was analysed
- ([2c4283e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2c4283ece768e74e9e481017531ad87989594c6c))
+ ([2c4283e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2c4283ece768e74e9e481017531ad87989594c6c))
- if analysis was performed without elements from the datamap no error
is displayed now
- ([b3681bf](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/b3681bf16842cf89f4181574180623b6fdbdb32e))
+ ([b3681bf](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/b3681bf16842cf89f4181574180623b6fdbdb32e))
- improved error handling with missing constraints
- ([337d0a0](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/337d0a0cfed410350eab0fae216bd09f5ad2ea3a))
+ ([337d0a0](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/337d0a0cfed410350eab0fae216bd09f5ad2ea3a))
- removing undefined from mdr filtering
- ([94e76ba](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/94e76ba890cc79b22867014ea76a136ee7b14c94))
+ ([94e76ba](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/94e76ba890cc79b22867014ea76a136ee7b14c94))
- renamed format_POSIXct to lowercase
- ([9306751](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9306751e762b70bda64000edfb45810915cc0ddf))
+ ([9306751](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9306751e762b70bda64000edfb45810915cc0ddf))
- formatting error
- ([1a551d8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1a551d80363bd422e0e2a504117413e078ae6509))
+ ([1a551d8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1a551d80363bd422e0e2a504117413e078ae6509))
- made demo files working
- ([26c864c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/26c864cadbe8323bf7671343e9d4183cb86ad428))
+ ([26c864c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/26c864cadbe8323bf7671343e9d4183cb86ad428))
- added support for datetime_format in conformance checks
- ([bde1f22](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bde1f22350925ef4e9fe8d3cb6c80d26e3888215))
+ ([bde1f22](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bde1f22350925ef4e9fe8d3cb6c80d26e3888215))
- changed default format for date constraint
- ([57fcc54](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/57fcc5451571ef241d1956a22e2e4ae70f4b743b))
+ ([57fcc54](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/57fcc5451571ef241d1956a22e2e4ae70f4b743b))
- fixed bug where empty filter-cols crashed the script
- ([1a1e7c4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1a1e7c4c83d4b2d99db00ccf4db35ea6ece0f615))
+ ([1a1e7c4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1a1e7c4c83d4b2d99db00ccf4db35ea6ece0f615))
- adapted to new version of `DIZutils::db_connection`
- ([73ce62b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/73ce62be0d37f21b08972643691932c1bff112a9))
+ ([73ce62b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/73ce62be0d37f21b08972643691932c1bff112a9))
- fixed date format in db-import
- ([8b29f2b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8b29f2b660774a48a6fc94a21d895bb63eb12b98))
+ ([8b29f2b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8b29f2b660774a48a6fc94a21d895bb63eb12b98))
#### Refactorings
- fixed gh action warnings
- ([8f7d207](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8f7d2076cc1f9c0c199d472406688e42b6fbd579))
+ ([8f7d207](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8f7d2076cc1f9c0c199d472406688e42b6fbd579))
- improved style of the report
- ([61d9725](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/61d9725759c0e192a66dd81c6d786958a5f75fd3))
+ ([61d9725](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/61d9725759c0e192a66dd81c6d786958a5f75fd3))
- updated restricting date calls
- ([38b54db](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/38b54db594f766565d6f31b6107cbf49fdf485b6))
+ ([38b54db](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/38b54db594f766565d6f31b6107cbf49fdf485b6))
#### CI
- moved to central ci-config
- ([fd136b4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/fd136b4d3183cd7c340061cf3305ffb1aea26c72))
+ ([fd136b4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/fd136b4d3183cd7c340061cf3305ffb1aea26c72))
- moving towards central ci-config
- ([7fafa3e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7fafa3e52e6e1f2e64e9f85c450497b5c81f548a))
+ ([7fafa3e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7fafa3e52e6e1f2e64e9f85c450497b5c81f548a))
- test
- ([6092201](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6092201d766716b40d648568451c3e02b0d2f188))
+ ([6092201](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6092201d766716b40d648568451c3e02b0d2f188))
- test
- ([da43245](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/da43245d8d3a06d51e0ccbdadd60e859da6aeb1a))
+ ([da43245](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/da43245d8d3a06d51e0ccbdadd60e859da6aeb1a))
- moved to central gitlab-ci
- ([03d2eed](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/03d2eed9a617ab59105f1d2c43b6afbb72a7150d))
+ ([03d2eed](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/03d2eed9a617ab59105f1d2c43b6afbb72a7150d))
- moved to central ci-config
- ([4fd377a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/4fd377a46114778e910043b71a45dfe0272da082))
+ ([4fd377a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/4fd377a46114778e910043b71a45dfe0272da082))
- moved to central ci-configuration
- ([5f2c3eb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5f2c3eb2a12731c2618192dbb88f018779fe33f2))
+ ([5f2c3eb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5f2c3eb2a12731c2618192dbb88f018779fe33f2))
- moved to decentral ci
- ([175b32f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/175b32fce03949dfa965f9cbffa5806eafa298a8))
+ ([175b32f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/175b32fce03949dfa965f9cbffa5806eafa298a8))
- moved to decentral ci-config
- ([8be72d7](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8be72d7f6637be164f0c58f5dbb37523ef1b47a9))
+ ([8be72d7](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8be72d7f6637be164f0c58f5dbb37523ef1b47a9))
#### Docs
- added `key` docu in function `apply_time_restriciton()`
- ([cf83793](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/cf837934b3e0f05adbf5a27b99f2a6c0672f87dc))
+ ([cf83793](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/cf837934b3e0f05adbf5a27b99f2a6c0672f87dc))
- fixed optionality of parameter in `apply_time_restriciton`
- ([a49a8db](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a49a8db1b03fdb236391bd3183562969d0d17e99))
+ ([a49a8db](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a49a8db1b03fdb236391bd3183562969d0d17e99))
#### Other changes
- updated desc
- ([52b97b1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/52b97b1836063ff8c4913ccd4b1ed0426a4b682f))
+ ([52b97b1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/52b97b1836063ff8c4913ccd4b1ed0426a4b682f))
- removed uncommented code
- ([8126666](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/81266669521a6ea00b6478e87f6b0da5401cf356))
+ ([8126666](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/81266669521a6ea00b6478e87f6b0da5401cf356))
- version increment to 0.1.6.9013
- ([91aba4b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/91aba4b18130edfeb09f4684596df93180311263))
+ ([91aba4b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/91aba4b18130edfeb09f4684596df93180311263))
- version increment
- ([1ea4875](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/1ea4875bf27d8d12ca89e81ea8c2d54125e3606a))
+ ([1ea4875](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/1ea4875bf27d8d12ca89e81ea8c2d54125e3606a))
- added findme in multicore functions
- ([78cbcf5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/78cbcf569ea8378fa080a5320078ae3aa0247016))
+ ([78cbcf5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/78cbcf569ea8378fa080a5320078ae3aa0247016))
- added support for custom format for time filtering csv files
- ([85ac59a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/85ac59a2c886e1bc65bfa0f59cd0e381b034fc48))
+ ([85ac59a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/85ac59a2c886e1bc65bfa0f59cd0e381b034fc48))
- added `check_date_restriction_requirements` as external function
- ([55ecb07](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/55ecb0736e24ebd6675668591c0bfc49be78b74d))
+ ([55ecb07](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/55ecb0736e24ebd6675668591c0bfc49be78b74d))
- fixed potential use of uncommented code
- ([02f6250](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/02f6250fb7969a2d7593f9108717a1dd4ec8691f))
+ ([02f6250](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/02f6250fb7969a2d7593f9108717a1dd4ec8691f))
- moving forwards to temporal restrictions
- ([43f946a](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/43f946aa927f6b7f7f8a677f30d9b183bc226067))
+ ([43f946a](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/43f946aa927f6b7f7f8a677f30d9b183bc226067))
Full set of changes:
-[`v0.1.6...v0.1.7`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.6...v0.1.7)
+[`v0.1.6...v0.1.7`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.6...v0.1.7)
## v0.1.6 (2021-02-18)
#### Bug fixes
- updated dizutils version
- ([f4a6182](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f4a618294af85ba7e00ab224159593b17a9eb79a))
+ ([f4a6182](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f4a618294af85ba7e00ab224159593b17a9eb79a))
- fixed error with missing date_format
- ([31e60a4](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/31e60a4d61509addbd98ce75027a25e0878638f3))
+ ([31e60a4](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/31e60a4d61509addbd98ce75027a25e0878638f3))
- custom setting inputs (from the ui) are now used as db-connection
parameters
- ([5fbd23f](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5fbd23f122be10767054950bc115f668f5361ef0))
+ ([5fbd23f](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5fbd23f122be10767054950bc115f668f5361ef0))
#### Refactorings
- reverted changes in example mdr
- ([2c65a18](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/2c65a181256486947c0084bab7812138f0cbf5fa))
+ ([2c65a18](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/2c65a181256486947c0084bab7812138f0cbf5fa))
- preparation for new release v0.1.6
- ([854d3b5](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/854d3b5e971db9ec2ce66742183faed7a1d8854d))
+ ([854d3b5](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/854d3b5e971db9ec2ce66742183faed7a1d8854d))
#### CI
- run ci also for new tags
- ([bc338b2](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/bc338b27d448d47f86798cc11de0778ee42da280))
+ ([bc338b2](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/bc338b27d448d47f86798cc11de0778ee42da280))
- xied ci
- ([94bcf25](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/94bcf2554a0d074c04d302de7ec20e403db9f0cb))
+ ([94bcf25](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/94bcf2554a0d074c04d302de7ec20e403db9f0cb))
- update
- ([d917729](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d917729d6daac72b4ea5246321750667e972a331))
+ ([d917729](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d917729d6daac72b4ea5246321750667e972a331))
- excluded building a new base_image for all dev-commits
- ([e4cbc09](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/e4cbc09d9ac510a22c50f5916a145830361a52b5))
+ ([e4cbc09](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/e4cbc09d9ac510a22c50f5916a145830361a52b5))
- fixed ci pipeline
- ([816dc34](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/816dc3441192084e3f33a819ef8efd6d828a27b0))
+ ([816dc34](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/816dc3441192084e3f33a819ef8efd6d828a27b0))
- fix
- ([84ef752](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/84ef752276210302537c2d1e2cb7997bb37f1b0d))
+ ([84ef752](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/84ef752276210302537c2d1e2cb7997bb37f1b0d))
- updated ci for updateing the base_image in ci-run
- ([c6cc1ee](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/c6cc1ee62db06b38be9f2230319a53d4aba1ca58))
+ ([c6cc1ee](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/c6cc1ee62db06b38be9f2230319a53d4aba1ca58))
- updated ci
- ([55b7631](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/55b76319e490779876b2cb9c992292f9c2f28e48))
+ ([55b7631](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/55b76319e490779876b2cb9c992292f9c2f28e48))
- fixed ci
- ([980ac31](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/980ac31f40d4706959c68179eb6a58804a0fe60e))
+ ([980ac31](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/980ac31f40d4706959c68179eb6a58804a0fe60e))
- removed apk
- ([98cd55b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/98cd55b0d6a42b0b2fab68be6b89a66151438deb))
+ ([98cd55b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/98cd55b0d6a42b0b2fab68be6b89a66151438deb))
- updated harbor url
- ([5af0465](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/5af0465a66b7225d95c95381f55a801bb3f6763b))
+ ([5af0465](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/5af0465a66b7225d95c95381f55a801bb3f6763b))
- docker login
- ([53348bb](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/53348bb560daf4f1201a94fdeeb7b3a0df0840a5))
+ ([53348bb](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/53348bb560daf4f1201a94fdeeb7b3a0df0840a5))
- fixed docker login
- ([f9b977b](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/f9b977bf2b56087b93b6d4bc1ae0e225245d7969))
+ ([f9b977b](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/f9b977bf2b56087b93b6d4bc1ae0e225245d7969))
- ci fixes for harbor login
- ([9b79009](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/9b79009ea821008164e6fa029fb34d6d587ab38b))
+ ([9b79009](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/9b79009ea821008164e6fa029fb34d6d587ab38b))
- updated ci
- ([d5040c1](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/d5040c174cbdda75a4217d9c75e39e73086a9a41))
+ ([d5040c1](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/d5040c174cbdda75a4217d9c75e39e73086a9a41))
- added dqa_base_image as ci-source
- ([7f595fd](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/7f595fd8f812accb137364db3d2eaa8acb513288))
+ ([7f595fd](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/7f595fd8f812accb137364db3d2eaa8acb513288))
- switched from install.packages() to install2.r due to speed
improvements
- ([0ea737e](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/0ea737e7cdd564674c04a23597bee6bd4817d632))
+ ([0ea737e](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/0ea737e7cdd564674c04a23597bee6bd4817d632))
- switched from install.packages() to install2.r due to speed
improvements
- ([a619a59](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/a619a59dbb149a16c4f401959404dea5dd7601e1))
+ ([a619a59](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/a619a59dbb149a16c4f401959404dea5dd7601e1))
- switched from install.packages() to install2.r due to speed
improvements
- ([be5666c](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/be5666cd94a3ba18e0e364dcf675af4cfbfdc57b))
+ ([be5666c](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/be5666cd94a3ba18e0e364dcf675af4cfbfdc57b))
- switched from install.packages() to install2.r due to speed
improvements
- ([8dfcffd](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/8dfcffdcef1019a997be89c9a5857ac5c7fa69a1))
+ ([8dfcffd](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/8dfcffdcef1019a997be89c9a5857ac5c7fa69a1))
- switched from install.packages() to install2.r due to speed
improvements
- ([dfe9f70](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/dfe9f709686473353015e6a18619d2b3511defbe))
+ ([dfe9f70](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/dfe9f709686473353015e6a18619d2b3511defbe))
- switched from install.packages() to install2.r due to speed
improvements
- ([6ca1dd8](https://gitlab.miracum.org/miracum/dqa/dqastats/tree/6ca1dd871b98c634a693ccaf52591d0461d67f5a))
+ ([6ca1dd8](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/tree/6ca1dd871b98c634a693ccaf52591d0461d67f5a))
Full set of changes:
-[`v0.1.5...v0.1.6`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.5...v0.1.6)
+[`v0.1.5...v0.1.6`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.5...v0.1.6)
## v0.1.5 (2020-05-07)
Full set of changes:
-[`v0.1.4...v0.1.5`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.4...v0.1.5)
+[`v0.1.4...v0.1.5`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.4...v0.1.5)
## v0.1.4 (2020-04-28)
Full set of changes:
-[`v0.1.3...v0.1.4`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.3...v0.1.4)
+[`v0.1.3...v0.1.4`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.3...v0.1.4)
## v0.1.3 (2020-04-20)
Full set of changes:
-[`v0.1.2...v0.1.3`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.2...v0.1.3)
+[`v0.1.2...v0.1.3`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.2...v0.1.3)
## v0.1.2 (2020-03-20)
Full set of changes:
-[`v0.1.1...v0.1.2`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.1...v0.1.2)
+[`v0.1.1...v0.1.2`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.1...v0.1.2)
## v0.1.1 (2020-03-18)
Full set of changes:
-[`v0.1.0...v0.1.1`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.1.0...v0.1.1)
+[`v0.1.0...v0.1.1`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.1.0...v0.1.1)
## v0.1.0 (2020-03-16)
Full set of changes:
-[`v0.0.7...v0.1.0`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.7...v0.1.0)
+[`v0.0.7...v0.1.0`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.7...v0.1.0)
## v0.0.7 (2020-02-25)
Full set of changes:
-[`v0.0.6...v0.0.7`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.6...v0.0.7)
+[`v0.0.6...v0.0.7`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.6...v0.0.7)
## v0.0.6 (2020-01-29)
Full set of changes:
-[`v0.0.5...v0.0.6`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.5...v0.0.6)
+[`v0.0.5...v0.0.6`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.5...v0.0.6)
## v0.0.5 (2019-12-02)
Full set of changes:
-[`v0.0.4...v0.0.5`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.4...v0.0.5)
+[`v0.0.4...v0.0.5`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.4...v0.0.5)
## v0.0.4 (2019-11-15)
Full set of changes:
-[`v0.0.3...v0.0.4`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.3...v0.0.4)
+[`v0.0.3...v0.0.4`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.3...v0.0.4)
## v0.0.3 (2019-11-12)
Full set of changes:
-[`v0.0.2...v0.0.3`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.2...v0.0.3)
+[`v0.0.2...v0.0.3`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.2...v0.0.3)
## v0.0.2 (2019-09-27)
Full set of changes:
-[`v0.0.2.9000...v0.0.2`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.2.9000...v0.0.2)
+[`v0.0.2.9000...v0.0.2`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.2.9000...v0.0.2)
## v0.0.2.9000 (2019-08-30)
Full set of changes:
-[`v0.0.1.9000...v0.0.2.9000`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.1.9000...v0.0.2.9000)
+[`v0.0.1.9000...v0.0.2.9000`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.1.9000...v0.0.2.9000)
## v0.0.1.9000 (2019-08-20)
Full set of changes:
-[`v0.0.0.9003...v0.0.1.9000`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.0.9003...v0.0.1.9000)
+[`v0.0.0.9003...v0.0.1.9000`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.0.9003...v0.0.1.9000)
## v0.0.0.9003 (2019-08-14)
Full set of changes:
-[`v0.0.0.9002...v0.0.0.9003`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/v0.0.0.9002...v0.0.0.9003)
+[`v0.0.0.9002...v0.0.0.9003`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/v0.0.0.9002...v0.0.0.9003)
## v0.0.0.9002 (2019-08-08)
Full set of changes:
-[`0567007...v0.0.0.9002`](https://gitlab.miracum.org/miracum/dqa/dqastats/-/compare/0567007...v0.0.0.9002)
+[`0567007...v0.0.0.9002`](https://git.uk-erlangen.de/mik-diz/mik-diz-phd/DQA/dqastats/compare/0567007...v0.0.0.9002)
diff --git a/R/DQA.R b/R/DQA.R
index a31be20..2d7f79c 100644
--- a/R/DQA.R
+++ b/R/DQA.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/calc_cat_stats.R b/R/calc_cat_stats.R
index 9696150..68a2172 100644
--- a/R/calc_cat_stats.R
+++ b/R/calc_cat_stats.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/calc_counts.R b/R/calc_counts.R
index 0f9d54d..8bf9257 100644
--- a/R/calc_counts.R
+++ b/R/calc_counts.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/calc_description.R b/R/calc_description.R
index 56ae6c8..fe107f9 100644
--- a/R/calc_description.R
+++ b/R/calc_description.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/calc_stats.R b/R/calc_stats.R
index 0aeb6aa..48b4eab 100644
--- a/R/calc_stats.R
+++ b/R/calc_stats.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/categorical_analysis.R b/R/categorical_analysis.R
index 3d596ed..44b21ef 100644
--- a/R/categorical_analysis.R
+++ b/R/categorical_analysis.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/completeness.R b/R/completeness.R
index 3a6cdf8..61d756c 100644
--- a/R/completeness.R
+++ b/R/completeness.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/conformance.R b/R/conformance.R
index 6880e5c..7bac6bb 100644
--- a/R/conformance.R
+++ b/R/conformance.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/count_uniques.R b/R/count_uniques.R
index 1ef1036..19e8142 100644
--- a/R/count_uniques.R
+++ b/R/count_uniques.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/create_pdf_report.R b/R/create_pdf_report.R
index ff60d0e..8c2924d 100644
--- a/R/create_pdf_report.R
+++ b/R/create_pdf_report.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
@@ -220,9 +220,11 @@ create_pdf_report <- function(rv = rv,
tmpdir = tempdir(),
fileext = "-params.yml"
)
+
writeLines(
text = c(paste0("source_system_name: \"", rv$source$system_name, "\""),
paste0("target_system_name: \"", rv$target$system_name, "\""),
+ paste0("sitename: \"", rv$sitename, "\""),
paste0("restricting_date: \"", get_restricting_date_info(
restricting_date = rv$restricting_date, time = FALSE), "\""
)),
@@ -264,145 +266,3 @@ create_pdf_report <- function(rv = rv,
})
}
}
-
-
-#' @title create_markdown helper function
-#'
-#' @description Internal function to generate the final PDF report.
-#'
-#' @param outdir A character string. The directory to store the resulting
-#' PDF document. Default: \code{tempdir}.
-#' @inheritParams load_csv
-#' @inheritParams dqa
-#'
-#' @return No return value. This function renders the PDF markdown report with
-#' the data quality assessment results and saves it to `outdir`.
-#'
-#' @examples
-#' \donttest{# runtime > 5 sec.
-#' utils_path <- system.file(
-#' "demo_data/utilities/",
-#' package = "DQAstats"
-#' )
-#' mdr_filename <- "mdr_example_data.csv"
-#' rv <- list()
-#' rv$mdr <- read_mdr(
-#' utils_path = utils_path,
-#' mdr_filename <- mdr_filename
-#' )
-#'
-#' source_system_name <- "exampleCSV_source"
-#' target_system_name <- "exampleCSV_target"
-#'
-#' rv <- c(rv, create_helper_vars(
-#' mdr = rv$mdr,
-#' source_db = source_system_name,
-#' target_db = target_system_name
-#' ))
-#' # save source/target vars
-#' rv$source$system_name <- source_system_name
-#' rv$target$system_name <- target_system_name
-#' rv$source$system_type <- "csv"
-#' rv$target$system_type <- "csv"
-#'
-#' rv$log$logfile_dir <- tempdir()
-#'
-#' # set headless (without GUI, progressbars, etc.)
-#' rv$headless <- TRUE
-#'
-#' # set configs
-#' demo_files <- system.file("demo_data", package = "DQAstats")
-#' Sys.setenv("EXAMPLECSV_SOURCE_PATH" = demo_files)
-#' Sys.setenv("EXAMPLECSV_TARGET_PATH" = demo_files)
-#'
-#' # get configs
-#' rv$source$settings <- DIZutils::get_config_env(
-#' system_name = rv$source$system_name,
-#' logfile_dir = rv$log$logfile_dir,
-#' headless = rv$headless
-#' )
-#' rv$target$settings <- DIZutils::get_config_env(
-#' system_name = tolower(rv$target$system_name),
-#' logfile_dir = rv$log$logfile_dir,
-#' headless = rv$headless
-#' )
-#'
-#' # set start_time (e.g. when clicking the 'Load Data'-button in shiny
-#' rv$start_time <- format(Sys.time(), usetz = TRUE, tz = "CET")
-#'
-#' # define restricting date
-#' rv$restricting_date$use_it <- FALSE
-#'
-#' # load source data
-#' tempdat <- data_loading(
-#' rv = rv,
-#' system = rv$source,
-#' keys_to_test = rv$keys_source
-#' )
-#' rv$data_source <- tempdat$outdata
-#'
-#' # load target data
-#' tempdat <- data_loading(
-#' rv = rv,
-#' system = rv$target,
-#' keys_to_test = rv$keys_target
-#' )
-#' rv$data_target <- tempdat$outdata
-#'
-#' rv$data_plausibility$atemporal <- get_atemp_plausis(
-#' rv = rv,
-#' atemp_vars = rv$pl$atemp_vars,
-#' mdr = rv$mdr,
-#' headless = rv$headless
-#' )
-#'
-#' # add the plausibility raw data to data_target and data_source
-#' for (i in names(rv$data_plausibility$atemporal)) {
-#' for (k in c("source_data", "target_data")) {
-#' w <- gsub("_data", "", k)
-#' raw_data <- paste0("data_", w)
-#' rv[[raw_data]][[i]] <-
-#' rv$data_plausibility$atemporal[[i]][[k]][[raw_data]]
-#' rv$data_plausibility$atemporal[[i]][[k]][[raw_data]] <- NULL
-#' }
-#' gc()
-#' }
-#'
-#' # calculate descriptive results
-#' rv$results_descriptive <- descriptive_results(
-#' rv = rv,
-#' headless = rv$headless
-#' )
-#'
-#' # calculate unique plausibilites
-#' rv$results_plausibility_unique <- uniq_plausi_results(
-#' rv = rv,
-#' uniq_vars = rv$pl$uniq_vars,
-#' mdr = rv$mdr,
-#' headless = rv$headless
-#' )
-#'
-#' create_markdown(
-#' rv = rv,
-#' utils_path = rv$utilspath,
-#' outdir = output_dir,
-#' headless = rv$headless
-#' )
-#' }
-#' @export
-#'
-create_markdown <- function(rv = rv,
- utils_path,
- outdir = tempdir(),
- headless = FALSE) {
- warning(paste0(
- "'create_markdown()' is deprecated ",
- "and will be removed in a future version. ",
- "Use 'create_pdf_report' instead."))
- create_pdf_report(
- rv = rv,
- utils_path,
- outdir = tempdir(),
- headless = FALSE
- )
-}
diff --git a/R/dataloading.R b/R/dataloading.R
index 1adff42..14ec241 100644
--- a/R/dataloading.R
+++ b/R/dataloading.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
@@ -26,7 +26,6 @@ load_csv_files <- function(mdr,
# original beginning of function
inputdir <- DIZtools::clean_path_name(inputdir)
-
available_systems <- mdr[get("source_system_name") == sourcesystem &
get("source_system_type") == "csv", ]
@@ -328,7 +327,6 @@ load_database <- function(rv,
## Initialize outlist:
outlist <- list()
-
## Read data:
outlist <- sapply(
X = keys_to_test,
@@ -360,20 +358,51 @@ load_database <- function(rv,
# blob/91a749cf1232b86af3d499c60b3cbb06dfe68618/R/
# datetime_restrictions.R#L333
# --> maybe try to resolve them / add replace string there
- replace_string <- paste0(
- "AS r_intermediate WHERE r_intermediate.",
- restricting_date_var, " BETWEEN TO_TIMESTAMP('",
- as.Date(
- rv$restricting_date$start,
- format = restricting_date_format
- ),
- "', 'YYYY-MM-DD') AND TO_TIMESTAMP('",
- as.Date(
- rv$restricting_date$end,
- format = restricting_date_format
- ),
- " 23:59:59', 'YYYY-MM-DD HH24:MI:SS')"
- )
+ if (db_type == "trino"){
+ replace_string <- paste0(
+ "AS r_intermediate WHERE r_intermediate.",
+ restricting_date_var, " BETWEEN TO_TIMESTAMP('",
+ as.Date(
+ rv$restricting_date$start,
+ format = restricting_date_format
+ ),
+ "', 'yyyy-mm-dd') AND TO_TIMESTAMP('",
+ as.Date(
+ rv$restricting_date$end,
+ format = restricting_date_format
+ ),
+ " 23:59:59', 'yyyy-mm-dd hh24:mi:ss')"
+ )
+ }else{
+ replace_string <- paste0(
+ "AS r_intermediate WHERE r_intermediate.",
+ restricting_date_var, " BETWEEN TO_TIMESTAMP('",
+ as.Date(
+ rv$restricting_date$start,
+ format = restricting_date_format
+ ),
+ "', 'YYYY-MM-DD') AND TO_TIMESTAMP('",
+ as.Date(
+ rv$restricting_date$end,
+ format = restricting_date_format
+ ),
+ " 23:59:59', 'YYYY-MM-DD HH24:MI:SS')"
+ )
+ }
+ # replace_string <- paste0(
+ # "AS r_intermediate WHERE r_intermediate.",
+ # restricting_date_var, " BETWEEN TO_TIMESTAMP('",
+ # as.Date(
+ # rv$restricting_date$start,
+ # format = restricting_date_format
+ # ),
+ # "', 'YYYY-MM-DD') AND TO_TIMESTAMP('",
+ # as.Date(
+ # rv$restricting_date$end,
+ # format = restricting_date_format
+ # ),
+ # " 23:59:59', 'YYYY-MM-DD HH24:MI:SS')"
+ # )
sql <- gsub("AS r_intermediate", replace_string, sql_statements[[i]])
msg <- paste0(msg, " (using a MODIFIED SUBSELECT)")
} else {
@@ -658,6 +687,7 @@ load_database <- function(rv,
return(outlist)
}
+
#' @title data_loading helper function
#'
#' @description Internal function to load the source and target data
@@ -735,7 +765,6 @@ load_database <- function(rv,
#' @export
data_loading <- function(rv, system, keys_to_test) {
# TODO: Test it!
- #
# check if all now necessary parameters are correct:
stopifnot(
@@ -830,7 +859,7 @@ data_loading <- function(rv, system, keys_to_test) {
)
outlist$sql_statements <- NA
- } else if (system$system_type %in% c("oracle", "postgres")) {
+ } else if (system$system_type %in% c("oracle", "postgres", "trino")) {
# import target SQL
msg <- "Loaded SQL statements from "
@@ -916,6 +945,32 @@ data_loading <- function(rv, system, keys_to_test) {
)
}
stopifnot(!is.null(db_con))
+ } else if (system$system_type == "trino") {
+
+ # test target_db
+ if (is.null(system$settings)) {
+ ## Use environment-settings:
+ db_con <-
+ DIZutils::db_connection(
+ system_name = system$system_name,
+ db_type = system$system_type,
+ headless = rv$headless,
+ logfile_dir = rv$log$logfile_dir
+ )
+ } else {
+ ## Use included settings:
+ db_con <-
+ DIZutils::db_connection(
+ system_name = system$system_name,
+ db_type = system$system_type,
+ headless = rv$headless,
+ logfile_dir = rv$log$logfile_dir,
+ from_env = FALSE,
+ settings = system$settings
+ )
+ }
+ stopifnot(!is.null(db_con))
+
}
# load target data
loaded_from_db <- load_database(
@@ -927,6 +982,7 @@ data_loading <- function(rv, system, keys_to_test) {
db_name = system$system_name,
db_type = system$system_type
)
+
outlist$outdata <- sapply(
X = names(loaded_from_db),
FUN = function(x) {
@@ -948,5 +1004,6 @@ data_loading <- function(rv, system, keys_to_test) {
} else {
stop("\nThis source_system_type is currently not implemented.\n\n")
}
+
return(outlist)
}
diff --git a/R/datamap.R b/R/datamap.R
index 092fe03..a76b7dc 100644
--- a/R/datamap.R
+++ b/R/datamap.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/datetime_restrictions.R b/R/datetime_restrictions.R
index fcd7f5a..3f03e59 100644
--- a/R/datetime_restrictions.R
+++ b/R/datetime_restrictions.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
@@ -273,7 +273,7 @@ apply_time_restriciton <- function(data,
data[, (colname_tmp) := NULL]
res <- data
return(res)
- } else if (system_type %in% c("postgres", "oracle")) {
+ } else if (system_type %in% c("postgres", "oracle", "trino")) {
if (is.null(system_name) || is.null(mdr) || is.null(db_con)) {
DIZtools::feedback(
print_this = paste0(
@@ -614,7 +614,7 @@ get_restricting_date_info <- function(restricting_date,
"nkung. Alle vorliegenden Daten wurden analysiert"
)
} else {
- res <- "No time restriction. All available data were analysed"
+ res <- "No time restriction. All available data were analyzed"
}
}
return(res)
diff --git a/R/descriptive_results.R b/R/descriptive_results.R
index 645ea66..a67d573 100644
--- a/R/descriptive_results.R
+++ b/R/descriptive_results.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/difference_check.R b/R/difference_check.R
index 659b9f4..b3b0f7c 100644
--- a/R/difference_check.R
+++ b/R/difference_check.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/etl.R b/R/etl.R
index 19f3bf4..2baeb99 100644
--- a/R/etl.R
+++ b/R/etl.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/export_results.R b/R/export_results.R
index c6cbad1..f3f3310 100644
--- a/R/export_results.R
+++ b/R/export_results.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/extensive_summary.R b/R/extensive_summary.R
index 1464eec..c71ab96 100644
--- a/R/extensive_summary.R
+++ b/R/extensive_summary.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/format_value_conformance_results.R b/R/format_value_conformance_results.R
index 70eb4e2..3e6b4c1 100644
--- a/R/format_value_conformance_results.R
+++ b/R/format_value_conformance_results.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/get_key_col.R b/R/get_key_col.R
index d1c8180..e5144a5 100644
--- a/R/get_key_col.R
+++ b/R/get_key_col.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
@@ -25,14 +25,14 @@ get_key_col <- function(rv) {
# our table is the "variable_name" (correspondingly,
# the variable_name is used to store the sql statements)
} else if (rv$source$system_type %in%
- c("postgres", "mysql", "fhir", "oracle")) {
+ c("postgres", "oracle", "trino")) {
# Back to key: 'variable_name' was assigned here:
key_col_name_src <- "key"
}
if (rv$target$system_type == "csv") {
key_col_name_tar <- "source_table_name"
} else if (rv$target$system_type %in%
- c("postgres", "mysql", "fhir", "oracle")) {
+ c("postgres", "oracle", "trino")) {
# Back to key: 'variable_name' was assigned here:
key_col_name_tar <- "key"
}
diff --git a/R/mdr.R b/R/mdr.R
index 94a8c38..8f72b55 100644
--- a/R/mdr.R
+++ b/R/mdr.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
@@ -204,7 +204,7 @@ create_helper_vars <- function(mdr,
} else if (mdr[get("source_system_name") ==
eval(parse(text = paste0(f, "_db"))),
unique(get("source_system_type"))] %in%
- c("postgres", "oracle")) {
+ c("postgres", "oracle", "trino")) {
outlist[[paste0("keys_", f)]] <-
mdr[get("variable_name") != "undefined" & get("key") != "undefined", ][
get("source_system_name") == eval(parse(text = paste0(f, "_db"))),
diff --git a/R/plausibilities.R b/R/plausibilities.R
index e603054..518c90a 100644
--- a/R/plausibilities.R
+++ b/R/plausibilities.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/plausibility_results.R b/R/plausibility_results.R
index e594653..5d9b127 100644
--- a/R/plausibility_results.R
+++ b/R/plausibility_results.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/reduce_cat.R b/R/reduce_cat.R
index d72072b..b79203f 100644
--- a/R/reduce_cat.R
+++ b/R/reduce_cat.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/report.R b/R/report.R
index 27bcafd..0f49a4a 100644
--- a/R/report.R
+++ b/R/report.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/simple_summary.R b/R/simple_summary.R
index 8480f36..e5f1580 100644
--- a/R/simple_summary.R
+++ b/R/simple_summary.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/test_csv.R b/R/test_csv.R
index b64397f..ecf7fd3 100644
--- a/R/test_csv.R
+++ b/R/test_csv.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/time_compare.R b/R/time_compare.R
index 9f52758..9dedbe0 100644
--- a/R/time_compare.R
+++ b/R/time_compare.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/R/utils.R b/R/utils.R
index 30bf5d0..5987258 100644
--- a/R/utils.R
+++ b/R/utils.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/README.md b/README.md
index 4d836d2..d7961b7 100644
--- a/README.md
+++ b/README.md
@@ -3,7 +3,6 @@
# DQAstats
-
[![](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![](https://www.r-pkg.org/badges/version/DQAstats)](https://cran.r-project.org/package=DQAstats)
[![CRAN
@@ -17,7 +16,7 @@ status](https://github.com/miracum/dqa-dqastats/workflows/R%20CMD%20Check%20via%
status](https://github.com/miracum/dqa-dqastats/workflows/lint/badge.svg)](https://github.com/miracum/dqa-dqastats/actions)
[![R build
status](https://github.com/miracum/dqa-dqastats/workflows/test-coverage/badge.svg)](https://github.com/miracum/dqa-dqastats/actions)
-[![](https://codecov.io/gh/https://github.com/miracum/dqa-dqastats/branch/master/graph/badge.svg)](https://codecov.io/gh/https://github.com/miracum/dqa-dqastats)
+[![](https://codecov.io/gh/https://github.com/miracum/dqa-dqastats/branch/master/graph/badge.svg)](https://app.codecov.io/gh/https://github.com/miracum/dqa-dqastats)
[![](https://img.shields.io/badge/doi-10.1055/s--0041--1733847-yellow.svg)](https://doi.org/10.1055/s-0041-1733847)
diff --git a/data-raw/debugging_info.R b/data-raw/debugging_info.R
index d650a85..cc32056 100644
--- a/data-raw/debugging_info.R
+++ b/data-raw/debugging_info.R
@@ -16,7 +16,7 @@ invisible(gc()) # Garbage collector/Clear unused RAM
# mdr_filename = "mdr_example_data.csv"
# output_dir = "output/"
-
+#test
devtools::load_all()
## using real data:
#source_system_name = "i2b2"
@@ -28,10 +28,11 @@ source_system_name = "kdb"
# target_system_name = "p21csv"
# target_system_name = "p21staging"
# target_system_name = "omop"
-target_system_name = "fhir_gw"
+target_system_name = "dwh"
# config_file = "../demo_settings_INTERNAL.yml"
#utils_path = system.file("application/_utilities/", package = "miRacumDQA")
utils_path = "../ume_dqatool/inst/application/_utilities/"
+utils_path = "./inst/demo_data/utilities/"
#mdr_filename = "samply_export.csv"
mdr_filename = "mdr_mini.csv"
#mdr_filename = "mdr_debug.csv"
@@ -48,8 +49,8 @@ DIZtools::setenv_file(
)
parallel = TRUE
ncores = 4
-restricting_date_start = "2022-01-01"
-restricting_date_end = "2022-12-31"
+restricting_date_start = "2021-01-01"
+restricting_date_end = "2021-12-31"
# Sys.setenv("P21CSV_PATH" = "~/development/_p21/data/2018_merged/")
diff --git a/data-raw/devstuffs.R b/data-raw/devstuffs.R
index fb93260..86cd60f 100644
--- a/data-raw/devstuffs.R
+++ b/data-raw/devstuffs.R
@@ -26,7 +26,7 @@ my_desc$set_authors(c(
# Remove some author fields
my_desc$del("Maintainer")
# Set the version
-my_desc$set_version("0.3.5")
+my_desc$set_version("0.3.6")
# The title of your package
my_desc$set(Title = "Core Functions for Data Quality Assessment")
@@ -109,7 +109,7 @@ usethis::use_package("DT", type = "Suggests")
remotes_append_vector <- NULL
# Development package
-tools_tag <- "dev" # e.g. "v0.1.7", "development" or "cran"
+tools_tag <- "cran" # e.g. "v0.1.7", "development" or "cran"
if (tools_tag == "cran") {
install.packages("DIZtools")
} else{
@@ -133,7 +133,7 @@ if (tools_tag == "cran") {
}
}
-utils_tag <- "development" # e.g. "v0.1.7", "development" or "cran"
+utils_tag <- "cran" # e.g. "v0.1.7", "development" or "cran"
if (utils_tag == "cran") {
install.packages("DIZutils")
} else{
diff --git a/inst/demo_data/utilities/RMD/DQA_report.qmd b/inst/demo_data/utilities/RMD/DQA_report.qmd
index bd24624..e523583 100644
--- a/inst/demo_data/utilities/RMD/DQA_report.qmd
+++ b/inst/demo_data/utilities/RMD/DQA_report.qmd
@@ -17,24 +17,26 @@
# along with this program. If not, see .
-title: "Data Quality Report: Comparison of {{< meta source_system_name >}} and {{< meta target_system_name >}}"
-subtitle: "{{< meta restricting_date >}}"
+
+title: |
+ | Data Quality Report: Comparison of {{< meta source_system_name >}} and {{< meta target_system_name >}}
+ | \normalsize {{< meta restricting_date >}}
author: "(c) Universitätsklinikum Erlangen"
date: today
-output:
+format:
pdf:
- geometry: 'left=2.5cm,right=2.5cm,top=2cm,bottom=2cm'
toc: true
- toc_depth: 2
- number_sections: true
- includes:
- in_header: "./_header/header.tex"
- keep_tex: true
- pandoc_args: [
- "--variable", "graphics=yes",
- "--variable", "compact-title=yes"
- ]
+ toc-depth: 2
+ number-sections: true
+ keep-tex: true
+ include-in-header: "./_header/header.tex"
+ geometry:
+ - left=25mm
+ - right=25mm
+ - top=20mm
+ - bottom=20mm
+
---
diff --git a/inst/demo_data/utilities/RMD/_header/header.tex b/inst/demo_data/utilities/RMD/_header/header.tex
index d94d92e..43b1829 100644
--- a/inst/demo_data/utilities/RMD/_header/header.tex
+++ b/inst/demo_data/utilities/RMD/_header/header.tex
@@ -19,3 +19,23 @@
\usepackage{float}
\usepackage{pdflscape}
\usepackage{longtable}
+
+\thispagestyle{empty}
+
+\pretitle{
+ \begin{center}
+ \LARGE
+ \vspace{4cm}
+}
+\posttitle{
+\end{center}
+}
+
+\predate{
+ \begin{center}
+}
+\postdate{
+\end{center}
+\newpage
+}
+
diff --git a/man/create_markdown.Rd b/man/create_markdown.Rd
deleted file mode 100644
index 15e7dd3..0000000
--- a/man/create_markdown.Rd
+++ /dev/null
@@ -1,141 +0,0 @@
-% Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/create_pdf_report.R
-\name{create_markdown}
-\alias{create_markdown}
-\title{create_markdown helper function}
-\usage{
-create_markdown(rv = rv, utils_path, outdir = tempdir(), headless = FALSE)
-}
-\arguments{
-\item{rv}{A list object. Internal list simulating Shiny's
-'reactive values'.}
-
-\item{utils_path}{A character string. The path to the utils-folder,
-containing the required app utilities like the MDR and the settings folder.}
-
-\item{outdir}{A character string. The directory to store the resulting
-PDF document. Default: \code{tempdir}.}
-
-\item{headless}{A boolean (default: FALSE). Indicating, if the function is
-run only in the console (headless = TRUE) or on a GUI frontend
-(headless = FALSE).}
-}
-\value{
-No return value. This function renders the PDF markdown report with
-the data quality assessment results and saves it to \code{outdir}.
-}
-\description{
-Internal function to generate the final PDF report.
-}
-\examples{
-\donttest{# runtime > 5 sec.
-utils_path <- system.file(
- "demo_data/utilities/",
- package = "DQAstats"
-)
-mdr_filename <- "mdr_example_data.csv"
-rv <- list()
-rv$mdr <- read_mdr(
- utils_path = utils_path,
- mdr_filename <- mdr_filename
-)
-
-source_system_name <- "exampleCSV_source"
-target_system_name <- "exampleCSV_target"
-
-rv <- c(rv, create_helper_vars(
- mdr = rv$mdr,
- source_db = source_system_name,
- target_db = target_system_name
-))
-# save source/target vars
-rv$source$system_name <- source_system_name
-rv$target$system_name <- target_system_name
-rv$source$system_type <- "csv"
-rv$target$system_type <- "csv"
-
-rv$log$logfile_dir <- tempdir()
-
-# set headless (without GUI, progressbars, etc.)
-rv$headless <- TRUE
-
-# set configs
-demo_files <- system.file("demo_data", package = "DQAstats")
-Sys.setenv("EXAMPLECSV_SOURCE_PATH" = demo_files)
-Sys.setenv("EXAMPLECSV_TARGET_PATH" = demo_files)
-
-# get configs
-rv$source$settings <- DIZutils::get_config_env(
- system_name = rv$source$system_name,
- logfile_dir = rv$log$logfile_dir,
- headless = rv$headless
-)
-rv$target$settings <- DIZutils::get_config_env(
- system_name = tolower(rv$target$system_name),
- logfile_dir = rv$log$logfile_dir,
- headless = rv$headless
-)
-
-# set start_time (e.g. when clicking the 'Load Data'-button in shiny
-rv$start_time <- format(Sys.time(), usetz = TRUE, tz = "CET")
-
-# define restricting date
-rv$restricting_date$use_it <- FALSE
-
-# load source data
-tempdat <- data_loading(
- rv = rv,
- system = rv$source,
- keys_to_test = rv$keys_source
-)
-rv$data_source <- tempdat$outdata
-
-# load target data
-tempdat <- data_loading(
- rv = rv,
- system = rv$target,
- keys_to_test = rv$keys_target
-)
-rv$data_target <- tempdat$outdata
-
-rv$data_plausibility$atemporal <- get_atemp_plausis(
- rv = rv,
- atemp_vars = rv$pl$atemp_vars,
- mdr = rv$mdr,
- headless = rv$headless
-)
-
-# add the plausibility raw data to data_target and data_source
-for (i in names(rv$data_plausibility$atemporal)) {
- for (k in c("source_data", "target_data")) {
- w <- gsub("_data", "", k)
- raw_data <- paste0("data_", w)
- rv[[raw_data]][[i]] <-
- rv$data_plausibility$atemporal[[i]][[k]][[raw_data]]
- rv$data_plausibility$atemporal[[i]][[k]][[raw_data]] <- NULL
- }
- gc()
-}
-
-# calculate descriptive results
-rv$results_descriptive <- descriptive_results(
- rv = rv,
- headless = rv$headless
-)
-
-# calculate unique plausibilites
-rv$results_plausibility_unique <- uniq_plausi_results(
- rv = rv,
- uniq_vars = rv$pl$uniq_vars,
- mdr = rv$mdr,
- headless = rv$headless
-)
-
-create_markdown(
- rv = rv,
- utils_path = rv$utilspath,
- outdir = output_dir,
- headless = rv$headless
-)
-}
-}
diff --git a/tests/testthat/test-DQA.R b/tests/testthat/test-DQA.R
index df77e21..2bd081d 100644
--- a/tests/testthat/test-DQA.R
+++ b/tests/testthat/test-DQA.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-MDR.R b/tests/testthat/test-MDR.R
index 66b47ae..57d8101 100644
--- a/tests/testthat/test-MDR.R
+++ b/tests/testthat/test-MDR.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA)
# of electronic health records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-check_date_restriction_requirements.R b/tests/testthat/test-check_date_restriction_requirements.R
index 2b510df..3a5e365 100644
--- a/tests/testthat/test-check_date_restriction_requirements.R
+++ b/tests/testthat/test-check_date_restriction_requirements.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-completeness.R b/tests/testthat/test-completeness.R
index 4b6e5c3..e41bbb6 100644
--- a/tests/testthat/test-completeness.R
+++ b/tests/testthat/test-completeness.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-conformance.R b/tests/testthat/test-conformance.R
index 43fc17c..acae09b 100644
--- a/tests/testthat/test-conformance.R
+++ b/tests/testthat/test-conformance.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-dataloading.R b/tests/testthat/test-dataloading.R
index d7483d4..037f774 100644
--- a/tests/testthat/test-dataloading.R
+++ b/tests/testthat/test-dataloading.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-datamap.R b/tests/testthat/test-datamap.R
index cf4e582..6358aec 100644
--- a/tests/testthat/test-datamap.R
+++ b/tests/testthat/test-datamap.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-datetime_restrictions.R b/tests/testthat/test-datetime_restrictions.R
index b25ec37..d633536 100644
--- a/tests/testthat/test-datetime_restrictions.R
+++ b/tests/testthat/test-datetime_restrictions.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-descriptive_results.R b/tests/testthat/test-descriptive_results.R
index ee00137..66a9e0d 100644
--- a/tests/testthat/test-descriptive_results.R
+++ b/tests/testthat/test-descriptive_results.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-etl_and_differences_checks.R b/tests/testthat/test-etl_and_differences_checks.R
index c0e9f06..703881e 100644
--- a/tests/testthat/test-etl_and_differences_checks.R
+++ b/tests/testthat/test-etl_and_differences_checks.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-export.R b/tests/testthat/test-export.R
index 6669cac..9e42324 100644
--- a/tests/testthat/test-export.R
+++ b/tests/testthat/test-export.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-helper_vars.R b/tests/testthat/test-helper_vars.R
index d56b15c..6410584 100644
--- a/tests/testthat/test-helper_vars.R
+++ b/tests/testthat/test-helper_vars.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-import.R b/tests/testthat/test-import.R
index ad6550f..337502e 100644
--- a/tests/testthat/test-import.R
+++ b/tests/testthat/test-import.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-lints.R b/tests/testthat/test-lints.R
index b063570..e825fdd 100644
--- a/tests/testthat/test-lints.R
+++ b/tests/testthat/test-lints.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-plausibilities.R b/tests/testthat/test-plausibilities.R
index 06fcb98..945966e 100644
--- a/tests/testthat/test-plausibilities.R
+++ b/tests/testthat/test-plausibilities.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-readme.R b/tests/testthat/test-readme.R
index 3d02c94..2595333 100644
--- a/tests/testthat/test-readme.R
+++ b/tests/testthat/test-readme.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-reduce_cat.R b/tests/testthat/test-reduce_cat.R
index b0f0959..6e9c064 100644
--- a/tests/testthat/test-reduce_cat.R
+++ b/tests/testthat/test-reduce_cat.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-render_conformance.R b/tests/testthat/test-render_conformance.R
index b16a60c..b89ab77 100644
--- a/tests/testthat/test-render_conformance.R
+++ b/tests/testthat/test-render_conformance.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-stats.R b/tests/testthat/test-stats.R
index 544b045..db6e688 100644
--- a/tests/testthat/test-stats.R
+++ b/tests/testthat/test-stats.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/tests/testthat/test-time_compare.R b/tests/testthat/test-time_compare.R
index abaf7cd..9ccf51b 100644
--- a/tests/testthat/test-time_compare.R
+++ b/tests/testthat/test-time_compare.R
@@ -1,6 +1,6 @@
# DQAstats - Perform data quality assessment (DQA) of electronic health
# records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
diff --git a/vignettes/DQAstats2SHIPdataset.qmd b/vignettes/DQAstats2SHIPdataset.qmd
index 8e85f3a..81295d3 100644
--- a/vignettes/DQAstats2SHIPdataset.qmd
+++ b/vignettes/DQAstats2SHIPdataset.qmd
@@ -6,7 +6,6 @@ vignette: >
%\VignetteEngine{quarto::html}
editor_options:
chunk_output_type: console
-
execute:
echo: true
message: false