Change Log

2024-11-21

Changes by Brandon Johns. Bugfixes and removed use of latex.

Added

requirements-cpu.txt file because the JAX devs are in a hurry to deprecate code

Changed

Removed use of latex from plots
Added some more instructions to the readme

Fixed

Internal Bug
- In "example_DeLaN.py", "load_dataset()" had a mismatching number of output arguments
Matplotlib deprecations 1
- Replace fig.canvas.set_window_title
- with fig.canvas.manager.set_window_title
Matplotlib deprecations 2
- Replace cm.get_cmap
- with matplotlib.colormaps.get_cmap
- and add import matplotlib to the top of each file that uses it
JAX deprecations 1
- See: jax-ml/jax#11280
- Replace jax.partial
- with functools.partial
- and add import functools to the top of each file that uses it
JAX deprecations 2
- See: jax-ml/jax#11706
- Remove mat_idx = jax.ops.index[..., mat_idx[0], mat_idx[1]]
- and
- Replace triangular_mat = jax.ops.index_update(triangular_mat, mat_idx, vec_lower_triangular[:])
- with triangular_mat = triangular_mat.at[mat_idx].set(vec_lower_triangular[:])
JAX deprecations 3
- Replace jax.tree_map
- with jax.tree.map