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ge3t_conformal_shim

Custom Conformal Shimming Calibration and Computation Tool for GE3T MRI Scanner

  • Automated using ExSI. A tool made by GE for the GE
  • Built for use with OpenSourceImaging Shim Drivers
  • Runs on ajacent machine to scanner computer, so that you have access to latest python environment
  • GUI built using PyQT6

Setting up and using the Shim Tool

  1. Navigate to the directory and install the required packages
$ cd <path/to/shimTool>
$ pip install -r requirements.txt

  1. Install / setup the pre-commit hooks

    $ pre-commit install

    Now when you commit, the pre-commit hooks will run and lint your code before you push. If you want to run the hooks manually, refer to https://pre-commit.com/#install or use pre-commit run --all-files

  2. There is provided a configsTemplate.json. Copy this file with the name configs.json, and adjust the contents to be dependent on personal preferences and scanner setup. The passwords / host ids are generally common for the GE Nspire

  3. Launch the tool. Use --no-gui to launch the tool in a python CLI or use --quiet to silence most of the logging and output.

$ python -i src/main.py [--no-gui] [--quiet]

Using just the ExSI Client

more details to be added...