DESCRIPTION

Type: Package
Package: maftools
Title: Summarize, Analyze and Visualize MAF Files
Version: 2.12.05
Date: 2021-04-30
Authors@R: 
    person(given = "Anand",
           family = "Mayakonda",
           role = c("aut", "cre"),
           email = "anand_mt@hotmail.com",
           comment = c(ORCID = "0000-0003-1162-687X"))
Maintainer: Anand Mayakonda <anand_mt@hotmail.com>
Description: Analyze and visualize Mutation Annotation Format (MAF) files
    from large scale sequencing studies. This package provides various
    functions to perform most commonly used analyses in cancer genomics
    and to create feature rich customizable visualzations with minimal
    effort.
License: MIT + file LICENSE
URL: https://github.com/PoisonAlien/maftools
BugReports: https://github.com/PoisonAlien/maftools/issues
Depends: 
    R (>= 3.3)
Imports: 
    data.table,
    grDevices,
    methods,
    RColorBrewer,
    Rhtslib,
    survival,
    DNAcopy
Suggests: 
    berryFunctions,
    Biostrings,
    BSgenome,
    BSgenome.Hsapiens.UCSC.hg19,
    GenomicRanges,
    IRanges,
    knitr,
    mclust,
    MultiAssayExperiment,
    NMF,
    R.utils,
    RaggedExperiment,
    rmarkdown,
    S4Vectors,
    pheatmap,
    curl
LinkingTo: 
    Rhtslib,
    zlibbioc
VignetteBuilder: 
    knitr
biocViews: DataRepresentation, DNASeq, Visualization, DriverMutation,
    VariantAnnotation, FeatureExtraction, Classification, SomaticMutation,
    Sequencing, FunctionalGenomics, Survival
Encoding: UTF-8
LazyData: TRUE
NeedsCompilation: no
Packaged: 2016-04-08 02:06:05 UTC; anand
RoxygenNote: 7.1.1
SystemRequirements: GNU make