Permission error using when using " from fenicstools.Interpolation import interpolate_nonmatching_mesh_any "

[thierrydjoumessi]

Hi Mikaem,

I installed fenicstools with the command "python setup.py install". Importing your library I have the following error:

please can you helps me? Thanks

/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:7: UserWarning: Probe/Probes/StatisticsProbe/StatisticsProbes not installed
warnings.warn("Probe/Probes/StatisticsProbe/StatisticsProbes not installed")
/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:12: UserWarning: StructuredGrid/ChannelGrid not installed
warnings.warn("StructuredGrid/ChannelGrid not installed")
/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:17: UserWarning: weighted_gradient_matrix/compiled_gradient_module not installed
warnings.warn("weighted_gradient_matrix/compiled_gradient_module not installed")
/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:22: UserWarning: getMemoryUsage/SetMatrixValue not installed
warnings.warn("getMemoryUsage/SetMatrixValue not installed")
/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:27: UserWarning: gauss_divergence/divergence_matrix not installed
warnings.warn("gauss_divergence/divergence_matrix not installed")
/usr/local/lib/python3.6/dist-packages/fenicstools/init.py:32: UserWarning: interpolate_nonmatching_mesh/interpolate_nonmatching_mesh_any not installed
warnings.warn("interpolate_nonmatching_mesh/interpolate_nonmatching_mesh_any not installed")

Bad key text.latex.unicode in file /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 112 ('text.latex.unicode : False # use "ucs" and "inputenc" LaTeX packages for handling')
You probably need to get an updated matplotlibrc file from
https://github.com/matplotlib/matplotlib/blob/v3.3.4/matplotlibrc.template
or from the matplotlib source distribution

Bad key savefig.frameon in file /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 423 ('savefig.frameon : True')
You probably need to get an updated matplotlibrc file from
https://github.com/matplotlib/matplotlib/blob/v3.3.4/matplotlibrc.template
or from the matplotlib source distribution

Bad key pgf.debug in file /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 444 ('pgf.debug : False')
You probably need to get an updated matplotlibrc file from
https://github.com/matplotlib/matplotlib/blob/v3.3.4/matplotlibrc.template
or from the matplotlib source distribution

Bad key verbose.level in file /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 475 ('verbose.level : silent # one of silent, helpful, debug, debug-annoying')
You probably need to get an updated matplotlibrc file from
https://github.com/matplotlib/matplotlib/blob/v3.3.4/matplotlibrc.template
or from the matplotlib source distribution

Bad key verbose.fileo in file /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle, line 476 ('verbose.fileo : sys.stdout # a log filename, sys.stdout or sys.stderr')
You probably need to get an updated matplotlibrc file from
https://github.com/matplotlib/matplotlib/blob/v3.3.4/matplotlibrc.template
or from the matplotlib source distribution
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The text.latex.preview rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The mathtext.fallback_to_cm rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle: Support for setting the 'mathtext.fallback_to_cm' rcParam is deprecated since 3.3 and will be removed two minor releases later; use 'mathtext.fallback : 'cm' instead.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The validate_bool_maybe_none function was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The savefig.jpeg_quality rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The keymap.all_axes rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The animation.avconv_path rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
In /home/rene-sims/.local/lib/python3.6/site-packages/matplotlib/mpl-data/stylelib/_classic_test.mplstyle:
The animation.avconv_args rcparam was deprecated in Matplotlib 3.3 and will be removed two minor releases later.
Traceback (most recent call last):
File "EM_phase.py", line 6, in
from fenicstools.Interpolation import interpolate_nonmatching_mesh_any
File "/usr/local/lib/python3.6/dist-packages/fenicstools/Interpolation.py", line 8, in
compiled_fem_module = cppimport.imp('fenicstools.fem.interpolation')
File "/usr/local/lib/python3.6/dist-packages/cppimport/init.py", line 35, in imp
return imp_from_filepath(filepath, fullname)
File "/usr/local/lib/python3.6/dist-packages/cppimport/init.py", line 65, in imp_from_filepath
template_and_build(filepath, module_data)
File "/usr/local/lib/python3.6/dist-packages/cppimport/importer.py", line 17, in template_and_build
run_templating(module_data)
File "/usr/local/lib/python3.6/dist-packages/cppimport/templating.py", line 36, in run_templating
with open(rendered_src_filepath, "w", newline="") as f:
PermissionError: [Errno 13] Permission non accordée: '/usr/local/lib/python3.6/dist-packages/fenicstools/fem/.rendered.interpolation.cpp
error.txt