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Microbiome: Try to speed up sparcc #2

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d-callan opened this issue Feb 28, 2024 · 0 comments

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d-callan commented Feb 28, 2024

From microbiomeComputations created by d-callan: VEuPathDB/microbiomeComputations#83

were using SpiecEasi::sparcc

it is very not fast.

im wondering if we maintain our own implementation using rcpp or something if we cant improve the situation.

d-callan added the microbiome label

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