michael_afm_testing.cfg

#  Example Qudi configuration file.
#
#
#
# IMPORTANT: The format of every 'module.Class' line has changed on 28.6.2015.
# =========  The class name now needs to be explicitly given here in the config.
#		  the config line must the form package.module.Class.ClassName
global:
    # list of modules to load when starting
    startup: ['man', 'tray', 'tasklogic']

    module_server:
        address: 'localhost'
        port: 12345

    ## For controlling the appearance of the GUI:
    stylesheet: 'qdark.qss'

hardware:

    laserSMD:
       module.Class: 'laser.laserquantum_laser.LaserQuantumLaser'
       psu: 'SMD6000'
       interface: 'ASRL3'
       maxpower: 0.500

    mykrowave:
        module.Class: 'microwave.mw_source_smiq.MicrowaveSmiq'
        gpib_address: 'GPIB0::28::INSTR'
        gpib_timeout: 20
        vector: True

    mynicard:
        module.Class: 'nidaq_afm.NationalInstrumentsXSeries'
        clock_channel: '/Dev1/Ctr2'
        counter_channels: ['/Dev1/Ctr1']
        scanner_clock_channel: '/Dev1/Ctr0'
        scanner_counter_channels: ['/Dev1/Ctr3']
        photon_sources: ['/Dev1/PFI9']
        scanner_ao_channels: ['/Dev1/AO0','/Dev1/AO1','/Dev1/AO2']
        scanner_ai_channels: ['/Dev1/AI0', '/Dev1/AI1', '/Dev1/AI2']
        afm_ao_channels: ['/Dev2/AO0','/Dev2/AO1', '/Dev2/AO2']
        afm_voltage_ranges: [[-9,9],[-9,9],[-9,9]]
        afm_position_ranges: [[-90e-6,90e-6],[-90e-6,90e-6],[-90e-6,90e-6]]
        afm_clock_in_channel: '/Dev2/PFI0'
        #pixel_clock_channel: '/Dev1/PFI6'
        scanner_clock_out_channel: '/Dev1/PFI6'
        #counter_ai_channels: = ['/Dev1/AI0']
        #scanner_y_ao: '/Dev1/AO1'
        #scanner_z_ao: '/Dev1/AO2'
        gate_in_channel: '/Dev1/PFI2'
        odmr_trigger_channel: '/Dev1/PFI5'
        counting_edge_rising: True
        clock_frequency: 100
        scanner_clock_frequency: 100
        scanner_position_ranges: [[-90e-6,90e-6],[-90e-6,90e-6],[-90e-6,90e-6]]
        scanner_voltage_ranges: [[-9,9],[-9,9],[-9,9]]

    simpledatadummy:
        module.Class: 'simple_data_dummy.SimpleDummy'

    #mydummyscanner:
    #    module.Class: 'confocal_scanner_dummy.ConfocalScannerDummy'
    #    clock_frequency: 100
    #    connect:
    #        fitlogic: 'fitlogic'

    #mydummycounter:
    #    module.Class: 'slow_counter_dummy.SlowCounterDummy'
    #    source_channels: 4
    #    clock_frequency: 100
    #    count_distribution: 'dark_bright_poisson'
    #    remoteaccess: True

    #mydummyodmrcounter:
    #    module.Class: 'odmr_counter_dummy.ODMRCounterDummy'
    #    clock_frequency: 100
    #    number_of_channels: 3
    #    connect:
    #        fitlogic: 'fitlogic'

    myfastcounter:
        module.Class: 'swabian_instruments.timetagger_fast_counter.TimeTaggerFastCounter'
        timetagger_channel_apd_0: 0
        timetagger_channel_apd_1: 1
        timetagger_channel_detect: 2
        timetagger_channel_sequence: 3
        timetagger_sum_channels: False

    myotherslowcounter:
        module.Class: 'swabian_instruments.timetagger_slow_counter.TimeTaggerSlowCounter'
        channel_apd_0: 0
        channel_odmr_trigger: 6

    mydummyfastcounter:
        module.Class: 'fast_counter_dummy.FastCounterDummy'
        #choose_trace: True
        #gated: False


    mypulser:
        module.Class: 'swabian_instruments.pulse_streamer.PulseStreamer'
        pulsestreamer_ip: '150.203.178.184'
        pulsed_file_dir: 'C:\\Software\\pulsed_files'
        laser_channel: 1
        uw_x_channel: 2
        apd_gate_channel: 4
    #mydummywavemeter:
    #    module.Class: 'wavemeter_dummy.WavemeterDummy'
    #    measurement_timing: 10

    #mydummyswitch1:
    #    module.Class: 'switches.switch_dummy.SwitchDummy'

    #mydummyswitch2:
    #    module.Class: 'switches.switch_dummy.SwitchDummy'

    #myspectrometer:
    #    module.Class: 'spectrometer.spectrometer_dummy.SpectrometerInterfaceDummy'
    #    connect:
    #        fitlogic: 'fitlogic'

    #motordummy:
    #    module.Class: 'motor.motor_dummy.MotorDummy'

    #magnetdummy:
    #    module.Class: 'magnet.magnet_dummy.MagnetDummy'

    #processdummy:
    #    module.Class: 'process_dummy.ProcessDummy'

    #laserdummy:
    #    module.Class: 'laser.simple_laser_dummy.SimpleLaserDummy'

logic:
    simpledatalogic:
        module.Class: 'simple_data_logic.SimpleDataLogic'
        connect:
            simpledata: 'simpledatadummy'

    softpid:
        module.Class: 'software_pid_controller.SoftPIDController'
        connect:
            process: 'processdummy'
            control: 'processdummy'

    pidlogic:
        module.Class: 'pid_logic.PIDLogic'
        connect:
            controller: 'softpid'
            savelogic: 'savelogic'

    kernellogic:
        module.Class: 'jupyterkernel.kernellogic.QudiKernelLogic'
        remoteaccess: True

    pulsedmasterlogic:
        module.Class: 'pulsed_master_logic.PulsedMasterLogic'
        direct_write: False
        connect:
            pulsedmeasurementlogic: 'pulsedmeasurementlogic'
            sequencegeneratorlogic: 'sequencegeneratorlogic'

    sequencegeneratorlogic:
        module.Class: 'sequence_generator_logic.SequenceGeneratorLogic'
        prepared_methods: ['generate_laser_on','generate_rabi','generate_pulsedodmr','generate_xy8']
        pulsed_file_dir: 'C:\\Software\\pulsed_files'
        default_waveform_format: 'pstream'
        #overhead_bytes: 4294967296  Not properly implemented yet
        #additional_methods_dir: 'C:\\Custom_dir\\Methods' optional

    pulseextractionlogic:
        module.Class: 'pulse_extraction_logic.PulseExtractionLogic'

    pulseanalysislogic:
        module.Class: 'pulse_analysis_logic.PulseAnalysisLogic'


    pulsedmeasurementlogic:
        module.Class: 'pulsed_measurement_logic.PulsedMeasurementLogic'
        connect:
            fastcounter: 'myfastcounter'
            pulseanalysislogic: 'pulseanalysislogic'
            pulseextractionlogic: 'pulseextractionlogic'
            pulsegenerator: 'mypulser'
            fitlogic: 'fitlogic'
            savelogic: 'savelogic'
            microwave: 'mykrowave'

    counterlogic:
        module.Class: 'counter_logic.CounterLogic'
        connect:
            counter1: 'mynicard'
            savelogic: 'savelogic'

    gatedcounterlogic:
        module.Class: 'counter_logic.CounterLogic'
        connect:
            counter1: 'mydummycounter'
            savelogic: 'savelogic'

    wavemeterloggerlogic:
        module.Class: 'wavemeter_logger_logic.WavemeterLoggerLogic'
        logic_acquisition_timing: 20
        logic_update_timing: 100
        connect:
            wavemeter1: 'mydummywavemeter'
            savelogic: 'savelogic'
            counterlogic: 'counterlogic'
            fitlogic: 'fitlogic'

    switchlogic:
        module.Class: 'switch_logic.SwitchLogic'
        connect:
            switch1: 'mydummyswitch1'
            switch2: 'mydummyswitch2'


    #scanner_other_counter_interfuse:
    #    module.Class: 'interfuse.confocal_swabian_counter_interfuse.ConfocalOtherCounterInterfuse'
    #    connect:
    #        confocalscanner1: 'mynicard'
    #        othercounter1: 'myotherslowcounter'
    #        fitlogic: 'fitlogic'

    scannerlogic:
        module.Class: 'confocal_logic.ConfocalLogic'
        connect:
            confocalscanner1: 'mynicard' #scanner_tilt_interfuse'
            savelogic: 'savelogic'

    #scanner_tilt_interfuse:
    #    module.Class: 'interfuse.scanner_tilt_interfuse.ScannerTiltInterfuse'
    #    connect:
    #        confocalscanner1: 'mynicard'

    optimizerlogic:
        module.Class: 'optimizer_logic.OptimizerLogic'
        connect:
            confocalscanner1: 'mynicard'
            fitlogic: 'fitlogic'

    poimanagerlogic:
        module.Class: 'poi_manager_logic.PoiManagerLogic'
        connect:
            scannerlogic: 'scannerlogic'
            optimizer1: 'optimizerlogic'
            savelogic: 'savelogic'

    odmrlogic:
        module.Class: 'odmr_logic.ODMRLogic'
        connect:
            odmrcounter: 'mynicard'
            fitlogic: 'fitlogic'
            microwave1: 'mykrowave'
            savelogic: 'savelogic'
            taskrunner: 'tasklogic'

    # this interfuse enables odmr if hardware trigger is not available or if
    # the counter has only two channels:
    #odmr_counter_microwave_interfuse:
    #    module.Class: 'interfuse.odmr_counter_microwave_interfuse.ODMRCounterMicrowaveInterfuse'
    #    connect:
    #        slowcounter: 'mynicard'
    #        microwave: 'mykrowave'

    # this oder logic runs now with the interfuse
    #odmrlogic2:
    #    module.Class: 'odmr_logic.ODMRLogic'
    #    connect:
    #        odmrcounter: 'odmr_counter_microwave_interfuse'
    #        fitlogic: 'fitlogic'
    #        microwave1: 'odmr_counter_microwave_interfuse'
    #        savelogic: 'savelogic'
    #        taskrunner: 'tasklogic'
    #    scanmode: 'LIST'


    #laserscannerlogic:
    #    module.Class: 'laser_scanner_logic.LaserScannerLogic'
    #    connect:
    #        confocalscanner1: 'mydummyscanner'
    #        savelogic: 'savelogic'

    fitlogic:
        module.Class: 'fit_logic.FitLogic'

    tasklogic:
        module.Class: 'taskrunner.TaskRunner'
        tasks:
        #    dummytask:
        #        module: 'dummy'
        #        preposttasks: ['ppdummy']
        #    dummyinterruptor:
        #        module: 'dummy'
        #        pausetasks: ['dummytask']
        #        preposttasks: ['ppdummy2']
        #    ppdummy:
        #        module: 'prepostdummy'
        #    ppdummy2:
        #        module: 'prepostdummy'
            scannerLocationRefocus:
                module: 'refocus'
        #        preposttasks: ['fliplasermirror']
                pausetasks: ['scan', 'odmr']
                needsmodules:
                    optimizer: 'optimizerlogic'
        #        config:
        #            initial: [1, 1, 1]
        #    fliplasermirror:
        #        module: 'flipmirror'
        #        needsmodules:
        #            switchlogic: 'switch'
        #        config:
        #            sequence: [('mydummyswitch1', 1, True), ('mydummyswitch1', 2, True), ('mydummyswitch2', 1, True)]

    automationlogic:
        module.Class: 'automation.AutomationLogic'
        connect:
            taskrunner: 'tasklogic'

    savelogic:
        module.Class: 'save_logic.SaveLogic'
        win_data_directory: 'C:/Data'   # DO NOT CHANGE THE DIRECTORY HERE! ONLY IN THE CUSTOM FILE!
        unix_data_directory: 'Data/'
        log_into_daily_directory: True

    spectrumlogic:
        module.Class: 'spectrum.SpectrumLogic'
        connect:
            spectrometer: 'myspectrometer'
            savelogic: 'savelogic'
            odmrlogic1: 'odmrlogic'

    magnet_logic:
        module.Class: 'magnet_logic.MagnetLogic'
        connect:
            magnetstage: 'magnetdummy'
            optimizerlogic: 'optimizerlogic'
            counterlogic: 'counterlogic'
            odmrlogic: 'odmrlogic'
            savelogic: 'savelogic'
            scannerlogic: 'scannerlogic'
            traceanalysis: 'trace_analysis_logic'
            gatedcounterlogic: 'gatedcounterlogic'
            sequencegeneratorlogic: 'sequencegeneratorlogic'

    magnet_motor_interfuse:
        module.Class: 'interfuse.magnet_motor_interfuse.MagnetMotorInterfuse'
        connect:
            motorstage: 'motordummy'

    trace_analysis_logic:
        module.Class: 'trace_analysis_logic.TraceAnalysisLogic'
        connect:
            counterlogic1: 'gatedcounterlogic'
            savelogic: 'savelogic'
            fitlogic: 'fitlogic'

    qdplotlogic:
        module.Class: 'qdplot_logic.QdplotLogic'
        connect:
            savelogic: 'savelogic'

    nuopslogic:
        module.Class: 'nuclear_operations_logic.NuclearOperationsLogic'
        connect:
            sequencegenerationlogic: 'sequencegeneratorlogic'
            traceanalysislogic: 'trace_analysis_logic'
            gatedcounterlogic: 'gatedcounterlogic'
            odmrlogic: 'odmrlogic'
            optimizerlogic: 'optimizerlogic'
            scannerlogic: 'scannerlogic'
            savelogic: 'savelogic'

    laserlogic:
        module.Class: 'laser_logic.LaserLogic'
        connect:
            laser: 'laserSMD'

gui:
    tray:
        module.Class: 'trayicon.TrayIcon'

    man:
        module.Class: 'manager.managergui.ManagerGui'

    counter:
        module.Class: 'counter.countergui.CounterGui'
        connect:
            counterlogic1: 'counterlogic'

    confocal:
        module.Class: 'confocal.confocalgui.ConfocalGui'
        connect:
            confocallogic1: 'scannerlogic'
            savelogic: 'savelogic'
            optimizerlogic1: 'optimizerlogic'
        fixed_aspect_ratio_xy: True
        fixed_aspect_ratio_depth: True
        slider_stepsize: 0.001  # in micrometer
        image_x_padding: 0.02
        image_y_padding: 0.02
        image_z_padding: 0.02

    poimanager:
        module.Class: 'poimanager.poimangui.PoiManagerGui'
        connect:
            poimanagerlogic1: 'poimanagerlogic'
            confocallogic1: 'scannerlogic'

    odmr:
        module.Class: 'odmr.odmrgui.ODMRGui'
        connect:
            odmrlogic1: 'odmrlogic'
            savelogic: 'savelogic'

    wavemeterlogger:
        module.Class: 'wavemeterlogger.wavemeterloggui.WavemeterLogGui'
        connect:
            wavemeterloggerlogic1: 'wavemeterloggerlogic'
            savelogic: 'savelogic'

    switches:
        module.Class: 'switcher.switchgui.SwitchGui'
        connect:
            switchlogic: 'switchlogic'

    taskrunner:
        module.Class: 'taskrunner.taskgui.TaskGui'
        connect:
            tasklogic: 'tasklogic'

    automation:
        module.Class: 'automation.automationgui.AutomationGui'
        connect:
            automationlogic: 'automationlogic'

    spectrometer:
        module.Class: 'spectrometer.spectrometergui.SpectrometerGui'
        connect:
            spectrumlogic1: 'spectrumlogic'

    pulsedmeasurement:
        module.Class: 'pulsed.pulsed_maingui.PulsedMeasurementGui'
        connect:
            pulsedmasterlogic: 'pulsedmasterlogic'
            savelogic: 'savelogic'

    simpledata:
        module.Class: 'simpledatagui.simpledatagui.SimpleDataGui'
        connect:
            simplelogic: 'simpledatalogic'


    magnet:
        module.Class: 'magnet.magnet_gui.MagnetGui'
        connect:
            magnetlogic1: 'magnet_logic'
            savelogic: 'savelogic'

    gatedcounter:
        module.Class: 'gated_counter.gated_counter_gui.GatedCounterGui'
        connect:
            gatedcounterlogic1: 'gatedcounterlogic'
            traceanalysislogic1: 'trace_analysis_logic'

    pidcontrol:
        module.Class: 'pidgui.pidgui.PIDGui'
        connect:
            pidlogic: 'pidlogic'

    errortest:
        module.Class: 'testgui.TestGui'
        text: 'Random text from config'
        error: 'This config is required!'

    qdplotter:
        module.Class: 'qdplotter.qdplottergui.QdplotterGui'
        connect:
            qdplotlogic1: 'qdplotlogic'

    nuclearops:
        module.Class: 'nuclear_operations.nuclear_operations.NuclearOperationsGui'
        connect:
            nuclearoperationslogic: 'nuopslogic'
            savelogic: 'savelogic'

    laser:
        module.Class: 'laser.laser.LaserGUI'
        connect:
            laserlogic: 'laserlogic'

    laserscanner:
        module.Class: 'laserscanner.laserscannergui.VoltScanGui'
        connect:
            voltagescannerlogic1: 'laserscannerlogic'
            savelogic: 'savelogic'

    # Gui to test the dummy counting
    odmrgui_program_trigger:
        module.Class: 'odmr.odmrgui.ODMRGui'
        connect:
            odmrlogic1: 'odmrlogic2'
            savelogic: 'savelogic'