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Possibility of using GRCh38 #3

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weiruiz opened this issue Sep 5, 2024 · 0 comments
Open

Possibility of using GRCh38 #3

weiruiz opened this issue Sep 5, 2024 · 0 comments

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@weiruiz
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weiruiz commented Sep 5, 2024

Dear Authors,

I am using gkmSVM, specifically the genNullSeqs.R to generate positive and negative training sequences. I wonder if it's possible to use bed narrowpeak files in GRCh38 if I supply BSgenome.Hsapiens.UCSC.hg38.masked as the genome parameter when calling the genNullSeqs() function. Thank you so much!

Best regards,
Weirui

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