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AU.params
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AU.params
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# this is just copper rebranded
# I think right now that Mini has to have at least three atoms per residue,
# hence the virtual atoms.
NAME AU
IO_STRING AU X
TYPE LIGAND
PROPERTIES METAL
AA UNK
ROTAMERS BASIC
ATOM AU Cu2p Cu2p 2.00
ATOM V1 VIRT VIRT 0.00
ATOM V2 VIRT VIRT 0.00
ATOM V3 VIRT VIRT 0.00
ATOM V4 VIRT VIRT 0.00
BOND AU V1
BOND AU V2
BOND AU V3
BOND AU V4
NBR_ATOM AU
NBR_RADIUS 5.0
NET_FORMAL_CHARGE +2
# tetrahedral geometry with 2.2 distance from center to vertex
# chirality is defined so that viewing from V1 to CU, V2-V3-V4 are in clockwise direction.
ICOOR_INTERNAL AU 0.000000 0.000000 0.000000 AU V1 V2
ICOOR_INTERNAL V1 0.000000 0.000000 2.200000 AU V1 V2
ICOOR_INTERNAL V2 0.000000 70.500000 2.200000 AU V1 V2
ICOOR_INTERNAL V3 120.000000 70.500000 2.200000 AU V1 V2
ICOOR_INTERNAL V4 -120.000000 70.500000 2.200000 AU V1 V2