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When demultiplexing, report contains irrelevant line #760

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marcelm opened this issue Feb 2, 2024 · 0 comments
Open

When demultiplexing, report contains irrelevant line #760

marcelm opened this issue Feb 2, 2024 · 0 comments

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@marcelm
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marcelm commented Feb 2, 2024 •
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Via #758

When demultiplexing like this:

cutadapt -g ^ACGT -g ^CCAA -o "out.{name}.fastq" tests/data/simple.fastq

The report contains this line:

Reads discarded as untrimmed:                0 (0.0%)

However, that line should only be printed when --discard-untrimmed was used.
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@marcelm