Deprecation warnings related to geopandas parquet and Shapely

[nmarchio]

Sort out deprecation warning and migrate / test everything using Shapely 2.0 when its released

https://github.com/mansueto-institute/kblock/blob/main/kblock/batch_kblock.py#L34

warnings.filterwarnings('ignore', message='.*initial implementation of Parquet.*')
warnings.filterwarnings("ignore", category=ShapelyDeprecationWarning)

[nmarchio]

Follow Shapely 2.0 progress here: shapely/shapely#962

More detail: https://github.com/shapely/shapely-rfc/blob/df79554e19aa7182796eaa3fed22e0e7084607ef/rfc/0001-shapely-2.0-roadmap.md#introduction

[nmarchio]

#26

https://shapely.readthedocs.io/en/latest/migration.html

[nmarchio]

Shapely 2.0 details:
https://shapely.readthedocs.io/en/latest/release/2.x.html#version-2-0-0
shapely/shapely#1578

[nmarchio]

Parquet: opengeospatial/geoparquet#122

[nmarchio]

GNB
/Users/nm/Desktop/kblock/kblock/batch_1a_prepare_gadm.py:97: ShapelyDeprecationWarning: The array interface is deprecated and will no longer work in Shapely 2.0. Convert the '.coords' to a numpy array instead.
  coast_fixes = gpd.GeoDataFrame.from_dict({'geometry': gpd.GeoSeries(pygeos.to_shapely(pygeos.get_parts(land_buffer[~pygeos.is_empty(land_buffer)]))).set_crs(3395).to_crs(4326)}).set_crs(4326)
CMR
/Users/nm/Desktop/kblock/kblock/batch_1a_prepare_gadm.py:97: ShapelyDeprecationWarning: The array interface is deprecated and will no longer work in Shapely 2.0. Convert the '.coords' to a numpy array instead.
  coast_fixes = gpd.GeoDataFrame.from_dict({'geometry': gpd.GeoSeries(pygeos.to_shapely(pygeos.get_parts(land_buffer[~pygeos.is_empty(land_buffer)]))).set_crs(3395).to_crs(4326)}).set_crs(4326)
(geospatial) nm@nmarchio kblock % 

[nmarchio]

/project2/bettencourt/mnp/update/repo/kblock/kblock/batch_1a_prepare_gadm.py:183: ShapelyDeprecationWarning: The array interface is deprecated and will no longer work in Shapely 2.0. Convert the '.coords' to a numpy array instead.
  land_buffer = pygeos.to_shapely(pygeos.get_parts(land_buffer[~pygeos.is_empty(land_buffer)]))
/software/python-anaconda-2021.05-el7-x86_64/envs/geospatial/lib/python3.9/site-packages/pygeos/set_operations.py:12

[nmarchio]

/software/python-anaconda-2021.05-el7-x86_64/envs/geospatial/lib/python3.9/site-packages/pygeos/set_operations.py:129: RuntimeWarning: invalid value encountered in intersection
  return lib.intersection(a, b, **kwargs)