CMakeLists.txt

cmake_minimum_required(VERSION 3.5)
project(Weaver)

set(EXECUTABLE_OUTPUT_PATH ${PROJECT_SOURCE_DIR}/bin)

set(CMAKE_CXX_STANDARD 11)

set(SOURCE_FILES src/main.cpp)

add_executable(solo_ploidy src/solo_ploidy.cpp)
add_executable(newParse_memfix src/newParse_memfix.cpp)
add_executable(getGC src/getGC.cpp)

include_directories(${CMAKE_CURRENT_LIST_DIR}/inc)

find_package(Boost)
IF (Boost_FOUND)
    include_directories(${Boost_INCLUDE_DIRS})
endif()

set (Boost_USE_STATIC_LIBS OFF) # enable dynamic linking
set (Boost_USE_MULTITHREAD ON)  # enable multithreading
find_package (Boost COMPONENTS REQUIRED chrono filesystem system program_options)


#aux_source_directory(${CMAKE_CURRENT_LIST_DIR}/src SRC_LIST)

#add_executable(Weaver ${SRC_LIST})
add_executable(Weaver src/main.cpp src/class.cpp src/distt.cpp src/interval.cpp src/LBP.cpp src/new_ploidy.cpp src/partition.cpp src/ploidy.cpp src/read.cpp)

target_link_libraries (Weaver ${Boost_LIBRARIES})